RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 HDGFL2Q7Z4V5 671 aaPredicted RBP26.38■■□□□ 1.81
CTDSP1-207ENST00000473420 SSH2Q76I76 1423 aa26.38■■□□□ 1.81
CTDSP1-207ENST00000473420 A0A1W2PP64 1363 aa26.37■■□□□ 1.81
CTDSP1-207ENST00000473420 ARHGEF10O15013 1369 aa26.37■■□□□ 1.81
CTDSP1-207ENST00000473420 KTN1Q86UP2 1357 aaKnown RBP26.37■■□□□ 1.81
CTDSP1-207ENST00000473420 ANKRD36BQ8N2N9 1353 aa26.37■■□□□ 1.81
CTDSP1-207ENST00000473420 KIF7Q2M1P5 1343 aa26.36■■□□□ 1.81
CTDSP1-207ENST00000473420 MED1Q15648 1581 aaPredicted RBP26.34■■□□□ 1.81
CTDSP1-207ENST00000473420 SPATA31A6Q5VVP1 1343 aa26.34■■□□□ 1.81
CTDSP1-207ENST00000473420 EDC4Q6P2E9 1401 aaKnown RBP26.33■■□□□ 1.81
CTDSP1-207ENST00000473420 ABCA3Q99758 1704 aa26.33■■□□□ 1.81
CTDSP1-207ENST00000473420 CRYBG1Q9Y4K1 1723 aa26.32■■□□□ 1.8
CTDSP1-207ENST00000473420 PAK3O75914 559 aaPredicted RBP26.32■■□□□ 1.8
CTDSP1-207ENST00000473420 CCDC7Q96M83 1385 aa26.32■■□□□ 1.8
CTDSP1-207ENST00000473420 PIK3C2AO00443 1686 aa26.31■■□□□ 1.8
CTDSP1-207ENST00000473420 POLR3GLQ9BT43 218 aa26.31■■□□□ 1.8
CTDSP1-207ENST00000473420 TTC21AQ8NDW8 1320 aa26.31■■□□□ 1.8
CTDSP1-207ENST00000473420 USP54Q70EL1 1684 aa26.3■■□□□ 1.8
CTDSP1-207ENST00000473420 TTC21BQ7Z4L5 1316 aa26.29■■□□□ 1.8
CTDSP1-207ENST00000473420 WASHC2AQ641Q2 1341 aa26.28■■□□□ 1.8
CTDSP1-207ENST00000473420 LMOD2Q6P5Q4 547 aa26.27■■□□□ 1.8
CTDSP1-207ENST00000473420 MARF1Q9Y4F3 1742 aaKnown RBP26.26■■□□□ 1.79
CTDSP1-207ENST00000473420 PHRF1Q9P1Y6 1649 aaKnown RBP26.26■■□□□ 1.79
CTDSP1-207ENST00000473420 ABTB2Q8N961 1025 aa26.25■■□□□ 1.79
CTDSP1-207ENST00000473420 KIF20BQ96Q89 1820 aa26.25■■□□□ 1.79
CTDSP1-207ENST00000473420 LRP6O75581 1613 aa26.24■■□□□ 1.79
CTDSP1-207ENST00000473420 NLRP13Q86W25 1043 aa26.21■■□□□ 1.79
CTDSP1-207ENST00000473420 USP31Q70CQ4 1352 aa26.2■■□□□ 1.79
CTDSP1-207ENST00000473420 USP19O94966 1318 aa26.2■■□□□ 1.79
CTDSP1-207ENST00000473420 SLIT3O75094 1523 aa26.2■■□□□ 1.79
CTDSP1-207ENST00000473420 NSD3Q9BZ95 1437 aa26.2■■□□□ 1.78
CTDSP1-207ENST00000473420 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.19■■□□□ 1.78
CTDSP1-207ENST00000473420 CARD14Q9BXL6 1004 aa26.19■■□□□ 1.78
CTDSP1-207ENST00000473420 NLRP6P59044 892 aa26.18■■□□□ 1.78
CTDSP1-207ENST00000473420 PANK3Q9H999 370 aa26.18■■□□□ 1.78
CTDSP1-207ENST00000473420 NUTM2BA6NNL0 878 aaPredicted RBP26.17■■□□□ 1.78
CTDSP1-207ENST00000473420 NUTM2EB1AL46 878 aaPredicted RBP26.17■■□□□ 1.78
CTDSP1-207ENST00000473420 NUTM2AQ8IVF1 878 aaPredicted RBP26.17■■□□□ 1.78
CTDSP1-207ENST00000473420 NUTM2GQ5VZR2 741 aa26.16■■□□□ 1.78
CTDSP1-207ENST00000473420 OVOS2A0A0J9YW53 1432 aa26.15■■□□□ 1.78
CTDSP1-207ENST00000473420 OVOS2Q6IE36 1432 aa26.15■■□□□ 1.78
CTDSP1-207ENST00000473420 ANKRD26Q9UPS8 1709 aa26.15■■□□□ 1.78
CTDSP1-207ENST00000473420 NME9Q86XW9 330 aa26.15■■□□□ 1.78
CTDSP1-207ENST00000473420 CABLES1Q8TDN4 633 aa26.15■■□□□ 1.78
CTDSP1-207ENST00000473420 HAP1P54257 671 aaPredicted RBP26.14■■□□□ 1.78
CTDSP1-207ENST00000473420 CGNL1Q0VF96 1302 aa26.13■■□□□ 1.77
CTDSP1-207ENST00000473420 FYB1O15117 783 aa26.11■■□□□ 1.77
CTDSP1-207ENST00000473420 MEX3CQ5U5Q3 659 aaKnown RBP26.1■■□□□ 1.77
CTDSP1-207ENST00000473420 COL14A1Q05707 1796 aaKnown RBP26.1■■□□□ 1.77
CTDSP1-207ENST00000473420 NFAT5O94916 1531 aa26.09■■□□□ 1.77
CTDSP1-207ENST00000473420 KCNH5Q8NCM2 988 aa26.09■■□□□ 1.77
CTDSP1-207ENST00000473420 NSD2O96028 1365 aa26.08■■□□□ 1.77
CTDSP1-207ENST00000473420 PLEKHG5O94827 1062 aa26.08■■□□□ 1.77
CTDSP1-207ENST00000473420 ADAMTS2O95450 1211 aa26.08■■□□□ 1.77
CTDSP1-207ENST00000473420 GCP02774 474 aa26.08■■□□□ 1.77
CTDSP1-207ENST00000473420 COG3Q96JB2 828 aa26.08■■□□□ 1.77
CTDSP1-207ENST00000473420 ZRANB1Q9UGI0 708 aa26.08■■□□□ 1.77
CTDSP1-207ENST00000473420 PLCH1Q4KWH8 1693 aa26.08■■□□□ 1.77
CTDSP1-207ENST00000473420 CPDO75976 1380 aa26.07■■□□□ 1.76
CTDSP1-207ENST00000473420 KNSTRNQ9Y448 316 aa26.07■■□□□ 1.76
CTDSP1-207ENST00000473420 NWD2Q9ULI1 1742 aa26.07■■□□□ 1.76
CTDSP1-207ENST00000473420 PER1O15534 1290 aaPredicted RBP26.05■■□□□ 1.76
CTDSP1-207ENST00000473420 GGNBP2Q9H3C7 697 aa26.05■■□□□ 1.76
CTDSP1-207ENST00000473420 LTN1O94822 1766 aa26.05■■□□□ 1.76
CTDSP1-207ENST00000473420 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.04■■□□□ 1.76
CTDSP1-207ENST00000473420 ZNF316A6NFI3 1004 aaPredicted RBP26.03■■□□□ 1.76
CTDSP1-207ENST00000473420 C8orf37Q96NL8 207 aa26.03■■□□□ 1.76
CTDSP1-207ENST00000473420 KIAA0232Q92628 1395 aa26.03■■□□□ 1.76
CTDSP1-207ENST00000473420 ABCC6O95255 1503 aa26.03■■□□□ 1.76
CTDSP1-207ENST00000473420 SLIT2O94813 1529 aa26.02■■□□□ 1.76
CTDSP1-207ENST00000473420 LMO7Q8WWI1 1683 aa26.02■■□□□ 1.76
CTDSP1-207ENST00000473420 COL18A1P39060 1754 aa26■■□□□ 1.75
CTDSP1-207ENST00000473420 NPC1L1Q9UHC9 1359 aa26■■□□□ 1.75
CTDSP1-207ENST00000473420 ZC3H6P61129 1189 aaKnown RBP26■■□□□ 1.75
CTDSP1-207ENST00000473420 NGLY1Q96IV0 654 aa26■■□□□ 1.75
CTDSP1-207ENST00000473420 PRDM11Q9NQV5 511 aa26■■□□□ 1.75
CTDSP1-207ENST00000473420 NRAPQ86VF7 1730 aa26■■□□□ 1.75
CTDSP1-207ENST00000473420 AMER1Q5JTC6 1135 aaPredicted RBP25.99■■□□□ 1.75
CTDSP1-207ENST00000473420 FNBP4Q8N3X1 1017 aaPredicted RBP25.99■■□□□ 1.75
CTDSP1-207ENST00000473420 AFF2P51816 1311 aa25.98■■□□□ 1.75
CTDSP1-207ENST00000473420 FAM83GA6ND36 823 aa25.98■■□□□ 1.75
CTDSP1-207ENST00000473420 PHF23Q9BUL5 403 aaPredicted RBP25.98■■□□□ 1.75
CTDSP1-207ENST00000473420 ARHGEF25Q86VW2 580 aa25.97■■□□□ 1.75
CTDSP1-207ENST00000473420 AATKQ6ZMQ8 1374 aa25.96■■□□□ 1.75
CTDSP1-207ENST00000473420 SOX12O15370 315 aa25.95■■□□□ 1.74
CTDSP1-207ENST00000473420 BCL9LQ86UU0 1499 aa25.94■■□□□ 1.74
CTDSP1-207ENST00000473420 MAP2P11137 1827 aaKnown RBP25.94■■□□□ 1.74
CTDSP1-207ENST00000473420 ZNF772Q68DY9 489 aaPredicted RBP25.94■■□□□ 1.74
CTDSP1-207ENST00000473420 RGPD5Q99666 1765 aa25.93■■□□□ 1.74
CTDSP1-207ENST00000473420 DDX10Q13206 875 aaKnown RBP25.92■■□□□ 1.74
CTDSP1-207ENST00000473420 CHRNA2Q15822 529 aa25.92■■□□□ 1.74
CTDSP1-207ENST00000473420 USP21Q9UK80 565 aa25.92■■□□□ 1.74
CTDSP1-207ENST00000473420 CAMTA1Q9Y6Y1 1673 aa25.92■■□□□ 1.74
CTDSP1-207ENST00000473420 MORC1Q86VD1 984 aa25.9■■□□□ 1.74
CTDSP1-207ENST00000473420 UNC5CLQ8IV45 518 aa25.9■■□□□ 1.74
CTDSP1-207ENST00000473420 BTG4Q9NY30 223 aa25.9■■□□□ 1.74
CTDSP1-207ENST00000473420 RGS17Q9UGC6 210 aaPredicted RBP25.9■■□□□ 1.74
CTDSP1-207ENST00000473420 RTL1A6NKG5 1358 aa25.9■■□□□ 1.74
CTDSP1-207ENST00000473420 KIF24Q5T7B8 1368 aa25.89■■□□□ 1.74
CTDSP1-207ENST00000473420 MAP3K19Q56UN5 1328 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms