RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 TULP4Q9NRJ4 1543 aa14.34□□□□□ -0.11
MCF2L-223ENST00000473345 COL14A1Q05707 1796 aaKnown RBP14.34□□□□□ -0.11
MCF2L-223ENST00000473345 TNS1Q9HBL0 1735 aaKnown RBP14.33□□□□□ -0.12
MCF2L-223ENST00000473345 A0A0G2JS52 829 aa14.32□□□□□ -0.12
MCF2L-223ENST00000473345 WASLO00401 505 aaPredicted RBP14.32□□□□□ -0.12
MCF2L-223ENST00000473345 MYT1Q01538 1121 aa14.32□□□□□ -0.12
MCF2L-223ENST00000473345 SF3B2Q13435 895 aaKnown RBP14.32□□□□□ -0.12
MCF2L-223ENST00000473345 RAB3GAP2Q9H2M9 1393 aa14.32□□□□□ -0.12
MCF2L-223ENST00000473345 ATP7BP35670 1465 aa14.31□□□□□ -0.12
MCF2L-223ENST00000473345 CHRNA2Q15822 529 aa14.31□□□□□ -0.12
MCF2L-223ENST00000473345 EZH2Q15910 746 aaKnown RBP14.31□□□□□ -0.12
MCF2L-223ENST00000473345 BAG6P46379 1132 aa14.3□□□□□ -0.12
MCF2L-223ENST00000473345 R3HDM1Q15032 1099 aaKnown RBP14.3□□□□□ -0.12
MCF2L-223ENST00000473345 KDM2AQ9Y2K7 1162 aa14.3□□□□□ -0.12
MCF2L-223ENST00000473345 KIAA0232Q92628 1395 aa14.3□□□□□ -0.12
MCF2L-223ENST00000473345 DISP2A7MBM2 1401 aa14.3□□□□□ -0.12
MCF2L-223ENST00000473345 SPATA31A1Q5TZJ5 1347 aa14.29□□□□□ -0.12
MCF2L-223ENST00000473345 RGPD1P0DJD0 1748 aa14.28□□□□□ -0.12
MCF2L-223ENST00000473345 GPRASP1Q5JY77 1395 aa14.28□□□□□ -0.12
MCF2L-223ENST00000473345 NUTM2GQ5VZR2 741 aa14.28□□□□□ -0.12
MCF2L-223ENST00000473345 CAMKK2Q96RR4 588 aa14.28□□□□□ -0.12
MCF2L-223ENST00000473345 PHRF1Q9P1Y6 1649 aaKnown RBP14.28□□□□□ -0.12
MCF2L-223ENST00000473345 ARHGEF28Q8N1W1 1705 aaKnown RBP14.27□□□□□ -0.12
MCF2L-223ENST00000473345 PAK3O75914 559 aaPredicted RBP14.26□□□□□ -0.13
MCF2L-223ENST00000473345 TRIM37O94972 964 aa14.26□□□□□ -0.13
MCF2L-223ENST00000473345 DCAF11Q8TEB1 546 aa14.26□□□□□ -0.13
MCF2L-223ENST00000473345 PRDM11Q9NQV5 511 aa14.26□□□□□ -0.13
MCF2L-223ENST00000473345 ZC3H6P61129 1189 aaKnown RBP14.25□□□□□ -0.13
MCF2L-223ENST00000473345 NGDNQ8NEJ9 315 aaKnown RBP14.25□□□□□ -0.13
MCF2L-223ENST00000473345 NUDT16Q96DE0 195 aaKnown RBP14.25□□□□□ -0.13
MCF2L-223ENST00000473345 STRN4Q9NRL3 753 aa14.25□□□□□ -0.13
MCF2L-223ENST00000473345 CAMTA1Q9Y6Y1 1673 aa14.25□□□□□ -0.13
MCF2L-223ENST00000473345 TOPAZ1Q8N9V7 1692 aa14.24□□□□□ -0.13
MCF2L-223ENST00000473345 NRKQ7Z2Y5 1582 aa14.24□□□□□ -0.13
MCF2L-223ENST00000473345 LMO7Q8WWI1 1683 aa14.23□□□□□ -0.13
MCF2L-223ENST00000473345 POLR3AO14802 1390 aaPredicted RBP14.22□□□□□ -0.13
MCF2L-223ENST00000473345 LARP1Q6PKG0 1096 aaKnown RBP14.22□□□□□ -0.13
MCF2L-223ENST00000473345 CDK19Q9BWU1 502 aa14.22□□□□□ -0.13
MCF2L-223ENST00000473345 USP35Q9P2H5 1018 aa14.22□□□□□ -0.13
MCF2L-223ENST00000473345 SSH2Q76I76 1423 aa14.22□□□□□ -0.13
MCF2L-223ENST00000473345 ACEP12821 1306 aa14.21□□□□□ -0.13
MCF2L-223ENST00000473345 RREB1Q92766 1687 aa14.21□□□□□ -0.13
MCF2L-223ENST00000473345 NUP188Q5SRE5 1749 aa14.21□□□□□ -0.14
MCF2L-223ENST00000473345 EIF3AQ14152 1382 aaKnown RBP14.21□□□□□ -0.14
MCF2L-223ENST00000473345 NBPF1Q3BBV0 1214 aa14.2□□□□□ -0.14
MCF2L-223ENST00000473345 NBPF8Q3BBV2 869 aa14.2□□□□□ -0.14
MCF2L-223ENST00000473345 USP19O94966 1318 aa14.19□□□□□ -0.14
MCF2L-223ENST00000473345 APBA3O96018 575 aa14.19□□□□□ -0.14
MCF2L-223ENST00000473345 PTF1AQ7RTS3 328 aa14.19□□□□□ -0.14
MCF2L-223ENST00000473345 ITSN1Q15811 1721 aa14.18□□□□□ -0.14
MCF2L-223ENST00000473345 FAM196AQ6ZSG2 479 aa14.18□□□□□ -0.14
MCF2L-223ENST00000473345 BARGINQ6ZT62 677 aa14.18□□□□□ -0.14
MCF2L-223ENST00000473345 PLEKHG3A1L390 1219 aa14.17□□□□□ -0.14
MCF2L-223ENST00000473345 CPDO75976 1380 aa14.16□□□□□ -0.14
MCF2L-223ENST00000473345 COL5A2P05997 1499 aaPredicted RBP14.16□□□□□ -0.14
MCF2L-223ENST00000473345 PEAK1Q9H792 1746 aa14.15□□□□□ -0.14
MCF2L-223ENST00000473345 CCDC61Q9Y6R9 512 aa14.15□□□□□ -0.14
MCF2L-223ENST00000473345 TCP11L2Q8N4U5 519 aa14.14□□□□□ -0.15
MCF2L-223ENST00000473345 PDGFDQ9GZP0 370 aaPredicted RBP14.14□□□□□ -0.15
MCF2L-223ENST00000473345 ABTB2Q8N961 1025 aa14.13□□□□□ -0.15
MCF2L-223ENST00000473345 ANO8Q9HCE9 1232 aaPredicted RBP14.13□□□□□ -0.15
MCF2L-223ENST00000473345 PARD3Q8TEW0 1356 aa14.12□□□□□ -0.15
MCF2L-223ENST00000473345 GCP02774 474 aa14.12□□□□□ -0.15
MCF2L-223ENST00000473345 EVA1CP58658 441 aa14.12□□□□□ -0.15
MCF2L-223ENST00000473345 CABP2Q9NPB3 220 aa14.12□□□□□ -0.15
MCF2L-223ENST00000473345 PARP4Q9UKK3 1724 aaKnown RBP14.12□□□□□ -0.15
MCF2L-223ENST00000473345 PDE3BQ13370 1112 aa14.11□□□□□ -0.15
MCF2L-223ENST00000473345 PPIP5K1Q6PFW1 1433 aa14.11□□□□□ -0.15
MCF2L-223ENST00000473345 LRRC37A3O60309 1634 aa14.11□□□□□ -0.15
MCF2L-223ENST00000473345 COL18A1P39060 1754 aa14.1□□□□□ -0.15
MCF2L-223ENST00000473345 PROM2Q8N271 834 aa14.1□□□□□ -0.15
MCF2L-223ENST00000473345 AXIN2Q9Y2T1 843 aa14.1□□□□□ -0.15
MCF2L-223ENST00000473345 SLIT3O75094 1523 aa14.1□□□□□ -0.15
MCF2L-223ENST00000473345 STAC3Q96MF2 364 aa14.09□□□□□ -0.15
MCF2L-223ENST00000473345 USP6P35125 1406 aa14.08□□□□□ -0.15
MCF2L-223ENST00000473345 CRB1P82279 1406 aa14.08□□□□□ -0.15
MCF2L-223ENST00000473345 PIK3C2AO00443 1686 aa14.08□□□□□ -0.16
MCF2L-223ENST00000473345 KIAA1210Q9ULL0 1709 aa14.08□□□□□ -0.16
MCF2L-223ENST00000473345 CASZ1Q86V15 1759 aa14.07□□□□□ -0.16
MCF2L-223ENST00000473345 CABP1Q9NZU7 370 aa14.07□□□□□ -0.16
MCF2L-223ENST00000473345 ZBTB7CA1YPR0 619 aa14.06□□□□□ -0.16
MCF2L-223ENST00000473345 SRPK2P78362 688 aaKnown RBP14.06□□□□□ -0.16
MCF2L-223ENST00000473345 NLRP13Q86W25 1043 aa14.06□□□□□ -0.16
MCF2L-223ENST00000473345 MARCH10Q8NA82 808 aaPredicted RBP14.06□□□□□ -0.16
MCF2L-223ENST00000473345 THRAP3Q9Y2W1 955 aaKnown RBP14.06□□□□□ -0.16
MCF2L-223ENST00000473345 SBF2Q86WG5 1849 aa14.06□□□□□ -0.16
MCF2L-223ENST00000473345 KCNQ2O43526 872 aa14.05□□□□□ -0.16
MCF2L-223ENST00000473345 CENPJQ9HC77 1338 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-223ENST00000473345 AATKQ6ZMQ8 1374 aa14.05□□□□□ -0.16
MCF2L-223ENST00000473345 OVOS2A0A0G2JMS6 1433 aa14.05□□□□□ -0.16
MCF2L-223ENST00000473345 OVOS2A0A0J9YW53 1432 aa14.05□□□□□ -0.16
MCF2L-223ENST00000473345 OVOS2Q6IE36 1432 aa14.05□□□□□ -0.16
MCF2L-223ENST00000473345 QRICH2Q9H0J4 1663 aa14.04□□□□□ -0.16
MCF2L-223ENST00000473345 YY1P25490 414 aa14.04□□□□□ -0.16
MCF2L-223ENST00000473345 PTGER2P43116 358 aa14.03□□□□□ -0.16
MCF2L-223ENST00000473345 NLRP6P59044 892 aa14.03□□□□□ -0.16
MCF2L-223ENST00000473345 SPON1Q9HCB6 807 aa14.03□□□□□ -0.16
MCF2L-223ENST00000473345 WNK3Q9BYP7 1800 aa14.03□□□□□ -0.16
MCF2L-223ENST00000473345 PLSCR1O15162 318 aa14.02□□□□□ -0.17
MCF2L-223ENST00000473345 NBPF14Q5TI25 921 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms