RNA–Protein interactions for RNA: ENST00000473221.5

APTX-217, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 687 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-217ENST00000473221 POLR3AO14802 1390 aaPredicted RBP13.57□□□□□ -0.24
APTX-217ENST00000473221 PROSER2Q86WR7 435 aaPredicted RBP13.56□□□□□ -0.24
APTX-217ENST00000473221 NRKQ7Z2Y5 1582 aa13.56□□□□□ -0.24
APTX-217ENST00000473221 ACEP12821 1306 aa13.56□□□□□ -0.24
APTX-217ENST00000473221 STRCP1A6NGW2 1772 aa13.55□□□□□ -0.24
APTX-217ENST00000473221 HNRNPUQ00839 825 aaKnown RBP eCLIP13.55□□□□□ -0.24
APTX-217ENST00000473221 USP6P35125 1406 aa13.54□□□□□ -0.24
APTX-217ENST00000473221 GGNBP2Q9H3C7 697 aa13.53□□□□□ -0.24
APTX-217ENST00000473221 C19orf44Q9H6X5 657 aa13.53□□□□□ -0.24
APTX-217ENST00000473221 TTC21AQ8NDW8 1320 aa13.53□□□□□ -0.24
APTX-217ENST00000473221 SSH2Q76I76 1423 aa13.53□□□□□ -0.24
APTX-217ENST00000473221 LRRC7Q96NW7 1537 aa13.53□□□□□ -0.24
APTX-217ENST00000473221 NUTM2FA1L443 756 aa13.52□□□□□ -0.25
APTX-217ENST00000473221 POTEAQ6S8J7 498 aa13.52□□□□□ -0.25
APTX-217ENST00000473221 CFAP53Q96M91 514 aa13.52□□□□□ -0.25
APTX-217ENST00000473221 ZBED9Q6R2W3 1325 aa13.52□□□□□ -0.25
APTX-217ENST00000473221 TTC21BQ7Z4L5 1316 aa13.52□□□□□ -0.25
APTX-217ENST00000473221 DCCP43146 1447 aa13.51□□□□□ -0.25
APTX-217ENST00000473221 C14orf37Q86TY3 774 aa13.51□□□□□ -0.25
APTX-217ENST00000473221 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.51□□□□□ -0.252e-6■■■□□ 17.9
APTX-217ENST00000473221 NGDNQ8NEJ9 315 aaKnown RBP13.51□□□□□ -0.25
APTX-217ENST00000473221 BLMP54132 1417 aaPredicted RBP13.5□□□□□ -0.25
APTX-217ENST00000473221 AATKQ6ZMQ8 1374 aa13.5□□□□□ -0.25
APTX-217ENST00000473221 MTHFSP49914 203 aa13.5□□□□□ -0.25
APTX-217ENST00000473221 WDR43Q15061 677 aaKnown RBP eCLIP13.5□□□□□ -0.25
APTX-217ENST00000473221 PHF8Q9UPP1 1060 aa13.5□□□□□ -0.25
APTX-217ENST00000473221 MAP2P11137 1827 aaKnown RBP13.5□□□□□ -0.25
APTX-217ENST00000473221 TMEM94Q12767 1356 aa13.49□□□□□ -0.25
APTX-217ENST00000473221 PMFBP1Q8TBY8 1022 aa13.49□□□□□ -0.25
APTX-217ENST00000473221 COG3Q96JB2 828 aa13.49□□□□□ -0.25
APTX-217ENST00000473221 USP31Q70CQ4 1352 aa13.48□□□□□ -0.25
APTX-217ENST00000473221 KIF1AQ12756 1690 aa13.48□□□□□ -0.25
APTX-217ENST00000473221 SHPRHQ149N8 1683 aa13.48□□□□□ -0.25
APTX-217ENST00000473221 USP54Q70EL1 1684 aa13.48□□□□□ -0.25
APTX-217ENST00000473221 TNNT2P45379 298 aaPredicted RBP13.48□□□□□ -0.25
APTX-217ENST00000473221 NME9Q86XW9 330 aa13.48□□□□□ -0.25
APTX-217ENST00000473221 RBM33Q96EV2 1170 aaKnown RBP13.48□□□□□ -0.25
APTX-217ENST00000473221 XIRP1Q702N8 1843 aaKnown RBP13.48□□□□□ -0.25
APTX-217ENST00000473221 ADAMTS8Q9UP79 889 aa13.47□□□□□ -0.25
APTX-217ENST00000473221 OVOS2A0A0J9YW53 1432 aa13.47□□□□□ -0.25
APTX-217ENST00000473221 OVOS2Q6IE36 1432 aa13.47□□□□□ -0.25
APTX-217ENST00000473221 PNPLA6Q8IY17 1366 aa13.46□□□□□ -0.25
APTX-217ENST00000473221 ATF3P18847 181 aa13.46□□□□□ -0.25
APTX-217ENST00000473221 CADPS2Q86UW7 1296 aa13.46□□□□□ -0.25
APTX-217ENST00000473221 SMG6Q86US8 1419 aaKnown RBP13.46□□□□□ -0.26
APTX-217ENST00000473221 ESCO1Q5FWF5 840 aa13.45□□□□□ -0.26
APTX-217ENST00000473221 MSH6P52701 1360 aa13.45□□□□□ -0.26
APTX-217ENST00000473221 C1orf167Q5SNV9 1468 aa13.44□□□□□ -0.26
APTX-217ENST00000473221 PIAS4Q8N2W9 510 aaPredicted RBP13.44□□□□□ -0.26
APTX-217ENST00000473221 NGEFQ8N5V2 710 aa13.44□□□□□ -0.26
APTX-217ENST00000473221 POLKQ9UBT6 870 aa13.44□□□□□ -0.26
APTX-217ENST00000473221 NUDCQ9Y266 331 aa13.44□□□□□ -0.26
APTX-217ENST00000473221 PIK3C2AO00443 1686 aa13.44□□□□□ -0.26
APTX-217ENST00000473221 COL3A1P02461 1466 aaPredicted RBP13.43□□□□□ -0.26
APTX-217ENST00000473221 MST1RQ04912 1400 aa13.43□□□□□ -0.26
APTX-217ENST00000473221 CDK12Q9NYV4 1490 aaPredicted RBP13.42□□□□□ -0.26
APTX-217ENST00000473221 PSME1Q06323 249 aa13.42□□□□□ -0.26
APTX-217ENST00000473221 PDE3BQ13370 1112 aa13.42□□□□□ -0.26
APTX-217ENST00000473221 DIAPH1O60610 1272 aaKnown RBP13.41□□□□□ -0.26
APTX-217ENST00000473221 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
APTX-217ENST00000473221 ZRANB1Q9UGI0 708 aa13.41□□□□□ -0.26
APTX-217ENST00000473221 MARF1Q9Y4F3 1742 aaKnown RBP13.41□□□□□ -0.26
APTX-217ENST00000473221 SRCAPQ6ZRS2 3230 aa13.41□□□□□ -0.26
APTX-217ENST00000473221 ORAI2Q96SN7 254 aa13.4□□□□□ -0.26
APTX-217ENST00000473221 PNNQ9H307 717 aaKnown RBP13.4□□□□□ -0.26
APTX-217ENST00000473221 TRPM3Q9HCF6 1732 aaPredicted RBP13.39□□□□□ -0.27
APTX-217ENST00000473221 ABTB2Q8N961 1025 aa13.39□□□□□ -0.27
APTX-217ENST00000473221 RUNDC1Q96C34 613 aa13.39□□□□□ -0.27
APTX-217ENST00000473221 KIF24Q5T7B8 1368 aa13.39□□□□□ -0.27
APTX-217ENST00000473221 NLRP6P59044 892 aa13.38□□□□□ -0.27
APTX-217ENST00000473221 FOXO3O43524 673 aa13.37□□□□□ -0.27
APTX-217ENST00000473221 PAK3O75914 559 aaPredicted RBP13.37□□□□□ -0.27
APTX-217ENST00000473221 UPF1Q92900 1129 aaKnown RBP eCLIP13.37□□□□□ -0.27
APTX-217ENST00000473221 U2AF1L5P0DN76 240 aaPredicted RBP13.36□□□□□ -0.27
APTX-217ENST00000473221 U2AF1Q01081 240 aaKnown RBP eCLIP13.36□□□□□ -0.272e-8■■■■■ 37
APTX-217ENST00000473221 KRT28Q7Z3Y7 464 aa13.36□□□□□ -0.27
APTX-217ENST00000473221 EMILIN1Q9Y6C2 1016 aa13.36□□□□□ -0.27
APTX-217ENST00000473221 FCHSD2O94868 740 aa13.35□□□□□ -0.27
APTX-217ENST00000473221 FBLN1P23142 703 aa13.35□□□□□ -0.27
APTX-217ENST00000473221 IL13P35225 146 aa13.35□□□□□ -0.27
APTX-217ENST00000473221 KCNH5Q8NCM2 988 aa13.35□□□□□ -0.27
APTX-217ENST00000473221 NPHP3Q7Z494 1330 aa13.35□□□□□ -0.27
APTX-217ENST00000473221 ALS2Q96Q42 1657 aa13.34□□□□□ -0.27
APTX-217ENST00000473221 SBNO1A3KN83 1393 aa13.34□□□□□ -0.27
APTX-217ENST00000473221 PEAK1Q9H792 1746 aa13.34□□□□□ -0.27
APTX-217ENST00000473221 APAF1O14727 1248 aa13.34□□□□□ -0.27
APTX-217ENST00000473221 U2SURPO15042 1029 aaKnown RBP13.34□□□□□ -0.27
APTX-217ENST00000473221 PPM1GO15355 546 aaPredicted RBP13.34□□□□□ -0.27
APTX-217ENST00000473221 RRS1Q15050 365 aaKnown RBP13.34□□□□□ -0.27
APTX-217ENST00000473221 PHRF1Q9P1Y6 1649 aaKnown RBP13.33□□□□□ -0.28
APTX-217ENST00000473221 CCDC27Q2M243 656 aa13.33□□□□□ -0.28
APTX-217ENST00000473221 CCDC146Q8IYE0 955 aa13.33□□□□□ -0.28
APTX-217ENST00000473221 ZNF521Q96K83 1311 aa13.33□□□□□ -0.28
APTX-217ENST00000473221 SLIT3O75094 1523 aa13.33□□□□□ -0.28
APTX-217ENST00000473221 FLT4P35916 1363 aa13.32□□□□□ -0.28
APTX-217ENST00000473221 PLEKHF1Q96S99 279 aa13.32□□□□□ -0.28
APTX-217ENST00000473221 SLAIN2Q9P270 581 aa13.32□□□□□ -0.28
APTX-217ENST00000473221 MAP3K19Q56UN5 1328 aa13.32□□□□□ -0.28
APTX-217ENST00000473221 LTN1O94822 1766 aa13.32□□□□□ -0.28
APTX-217ENST00000473221 RTL1A6NKG5 1358 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms