RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 RCAN3Q9UKA8 241 aa24.14■■□□□ 1.45
GCFC2-208ENST00000472230 ACEP12821 1306 aa24.13■■□□□ 1.45
GCFC2-208ENST00000472230 RNF123Q5XPI4 1314 aa24.13■■□□□ 1.45
GCFC2-208ENST00000472230 ZNF521Q96K83 1311 aa24.13■■□□□ 1.45
GCFC2-208ENST00000472230 U2AF1L5P0DN76 240 aaPredicted RBP24.13■■□□□ 1.45
GCFC2-208ENST00000472230 U2AF1Q01081 240 aaKnown RBP eCLIP24.13■■□□□ 1.45
GCFC2-208ENST00000472230 COG3Q96JB2 828 aa24.13■■□□□ 1.45
GCFC2-208ENST00000472230 NPHP4O75161 1426 aaPredicted RBP24.12■■□□□ 1.45
GCFC2-208ENST00000472230 MAP2P11137 1827 aaKnown RBP24.11■■□□□ 1.45
GCFC2-208ENST00000472230 COL3A1P02461 1466 aaPredicted RBP24.11■■□□□ 1.45
GCFC2-208ENST00000472230 NKTRP30414 1462 aaKnown RBP24.1■■□□□ 1.45
GCFC2-208ENST00000472230 NRKQ7Z2Y5 1582 aa24.1■■□□□ 1.45
GCFC2-208ENST00000472230 U2SURPO15042 1029 aaKnown RBP24.1■■□□□ 1.45
GCFC2-208ENST00000472230 RGPD8O14715 1765 aaPredicted RBP24.09■■□□□ 1.45
GCFC2-208ENST00000472230 DIAPH1O60610 1272 aaKnown RBP24.09■■□□□ 1.45
GCFC2-208ENST00000472230 PPP4R2Q9NY27 417 aa24.08■■□□□ 1.44
GCFC2-208ENST00000472230 USP6P35125 1406 aa24.07■■□□□ 1.44
GCFC2-208ENST00000472230 TTC21BQ7Z4L5 1316 aa24.07■■□□□ 1.44
GCFC2-208ENST00000472230 FMN2Q9NZ56 1722 aa24.07■■□□□ 1.44
GCFC2-208ENST00000472230 PPM1GO15355 546 aaPredicted RBP24.07■■□□□ 1.44
GCFC2-208ENST00000472230 POLKQ9UBT6 870 aa24.07■■□□□ 1.44
GCFC2-208ENST00000472230 ANKARQ7Z5J8 1434 aa24.07■■□□□ 1.44
GCFC2-208ENST00000472230 PNPLA6Q8IY17 1366 aa24.07■■□□□ 1.44
GCFC2-208ENST00000472230 ZRANB1Q9UGI0 708 aa24.07■■□□□ 1.44
GCFC2-208ENST00000472230 TCP11L2Q8N4U5 519 aa24.06■■□□□ 1.44
GCFC2-208ENST00000472230 IQSEC2Q5JU85 1478 aa24.06■■□□□ 1.44
GCFC2-208ENST00000472230 SLFN5Q08AF3 891 aa24.05■■□□□ 1.44
GCFC2-208ENST00000472230 PMFBP1Q8TBY8 1022 aa24.05■■□□□ 1.44
GCFC2-208ENST00000472230 AATKQ6ZMQ8 1374 aa24.05■■□□□ 1.44
GCFC2-208ENST00000472230 NGDNQ8NEJ9 315 aaKnown RBP24.05■■□□□ 1.44
GCFC2-208ENST00000472230 RRP1P56182 461 aaKnown RBP24.04■■□□□ 1.44
GCFC2-208ENST00000472230 DUSP27Q5VZP5 1158 aa24.04■■□□□ 1.44
GCFC2-208ENST00000472230 NALCNQ8IZF0 1738 aa24.04■■□□□ 1.44
GCFC2-208ENST00000472230 NEUROD2Q15784 382 aa24.04■■□□□ 1.44
GCFC2-208ENST00000472230 PNNQ9H307 717 aaKnown RBP24.03■■□□□ 1.44
GCFC2-208ENST00000472230 E9PSI1 815 aa24.03■■□□□ 1.44
GCFC2-208ENST00000472230 FBLN1P23142 703 aa24.03■■□□□ 1.44
GCFC2-208ENST00000472230 WWC1Q8IX03 1113 aa24.01■■□□□ 1.43
GCFC2-208ENST00000472230 RRP7AQ9Y3A4 280 aaKnown RBP24.01■■□□□ 1.43
GCFC2-208ENST00000472230 CDK12Q9NYV4 1490 aaPredicted RBP24■■□□□ 1.43
GCFC2-208ENST00000472230 TTC21AQ8NDW8 1320 aa24■■□□□ 1.43
GCFC2-208ENST00000472230 MAPK8IP3Q9UPT6 1336 aa24■■□□□ 1.43
GCFC2-208ENST00000472230 EMILIN1Q9Y6C2 1016 aa24■■□□□ 1.43
GCFC2-208ENST00000472230 NCBP3Q53F19 620 aaKnown RBP23.99■■□□□ 1.43
GCFC2-208ENST00000472230 TRMT2AQ8IZ69 625 aaKnown RBP23.98■■□□□ 1.43
GCFC2-208ENST00000472230 CCDC27Q2M243 656 aa23.97■■□□□ 1.43
GCFC2-208ENST00000472230 OVOS2A0A0J9YW53 1432 aa23.97■■□□□ 1.43
GCFC2-208ENST00000472230 OVOS2Q6IE36 1432 aa23.97■■□□□ 1.43
GCFC2-208ENST00000472230 SSH2Q76I76 1423 aa23.97■■□□□ 1.43
GCFC2-208ENST00000472230 ADGRL3Q9HAR2 1447 aa23.96■■□□□ 1.43
GCFC2-208ENST00000472230 RRS1Q15050 365 aaKnown RBP23.96■■□□□ 1.43
GCFC2-208ENST00000472230 C14orf37Q86TY3 774 aa23.96■■□□□ 1.43
GCFC2-208ENST00000472230 PLEKHF1Q96S99 279 aa23.95■■□□□ 1.43
GCFC2-208ENST00000472230 NWD1Q149M9 1564 aa23.95■■□□□ 1.42
GCFC2-208ENST00000472230 NEFMP07197 916 aa23.95■■□□□ 1.42
GCFC2-208ENST00000472230 WDR63Q8IWG1 891 aa23.95■■□□□ 1.42
GCFC2-208ENST00000472230 SPINK5Q9NQ38 1064 aaPredicted RBP23.95■■□□□ 1.42
GCFC2-208ENST00000472230 RBM33Q96EV2 1170 aaKnown RBP23.94■■□□□ 1.42
GCFC2-208ENST00000472230 FCHSD2O94868 740 aa23.93■■□□□ 1.42
GCFC2-208ENST00000472230 PHF23Q9BUL5 403 aaPredicted RBP23.93■■□□□ 1.42
GCFC2-208ENST00000472230 DMRT2Q9Y5R5 561 aa23.93■■□□□ 1.42
GCFC2-208ENST00000472230 LRRC7Q96NW7 1537 aa23.91■■□□□ 1.42
GCFC2-208ENST00000472230 TMPOP42166 694 aaKnown RBP23.9■■□□□ 1.42
GCFC2-208ENST00000472230 PHF8Q9UPP1 1060 aa23.9■■□□□ 1.42
GCFC2-208ENST00000472230 USP31Q70CQ4 1352 aa23.9■■□□□ 1.42
GCFC2-208ENST00000472230 IL13P35225 146 aa23.9■■□□□ 1.42
GCFC2-208ENST00000472230 B4GALNT3Q6L9W6 998 aa23.9■■□□□ 1.42
GCFC2-208ENST00000472230 PROSER2Q86WR7 435 aaPredicted RBP23.89■■□□□ 1.41
GCFC2-208ENST00000472230 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.89■■□□□ 1.41
GCFC2-208ENST00000472230 PIK3C2AO00443 1686 aa23.89■■□□□ 1.41
GCFC2-208ENST00000472230 RSPH6AQ9H0K4 717 aa23.88■■□□□ 1.41
GCFC2-208ENST00000472230 PRKAR2BP31323 418 aa23.87■■□□□ 1.41
GCFC2-208ENST00000472230 SOX12O15370 315 aa23.86■■□□□ 1.41
GCFC2-208ENST00000472230 PLIN1O60240 522 aa23.86■■□□□ 1.41
GCFC2-208ENST00000472230 HMOX1P09601 288 aa23.86■■□□□ 1.41
GCFC2-208ENST00000472230 MYH16Q9H6N6 1097 aa23.86■■□□□ 1.41
GCFC2-208ENST00000472230 RIPK4P57078 832 aa23.85■■□□□ 1.41
GCFC2-208ENST00000472230 CCDC136Q96JN2 1154 aa23.85■■□□□ 1.41
GCFC2-208ENST00000472230 PAK3O75914 559 aaPredicted RBP23.85■■□□□ 1.41
GCFC2-208ENST00000472230 ESCO1Q5FWF5 840 aa23.85■■□□□ 1.41
GCFC2-208ENST00000472230 NLRP6P59044 892 aa23.84■■□□□ 1.41
GCFC2-208ENST00000472230 EXOC6Q8TAG9 804 aa23.83■■□□□ 1.41
GCFC2-208ENST00000472230 PEAK1Q9H792 1746 aa23.82■■□□□ 1.4
GCFC2-208ENST00000472230 ABTB2Q8N961 1025 aa23.81■■□□□ 1.4
GCFC2-208ENST00000472230 TRIM35Q9UPQ4 493 aa23.81■■□□□ 1.4
GCFC2-208ENST00000472230 USP54Q70EL1 1684 aa23.81■■□□□ 1.4
GCFC2-208ENST00000472230 EIF4A2Q14240 407 aaKnown RBP23.8■■□□□ 1.4
GCFC2-208ENST00000472230 PSME1Q06323 249 aa23.8■■□□□ 1.4
GCFC2-208ENST00000472230 MAP3K19Q56UN5 1328 aa23.79■■□□□ 1.4
GCFC2-208ENST00000472230 SBNO1A3KN83 1393 aa23.79■■□□□ 1.4
GCFC2-208ENST00000472230 HSPA2P54652 639 aa23.79■■□□□ 1.4
GCFC2-208ENST00000472230 NFE2L2Q16236 605 aa23.79■■□□□ 1.4
GCFC2-208ENST00000472230 NUTM2GQ5VZR2 741 aa23.79■■□□□ 1.4
GCFC2-208ENST00000472230 IL16Q14005 1332 aa23.78■■□□□ 1.4
GCFC2-208ENST00000472230 AMPHP49418 695 aa23.78■■□□□ 1.4
GCFC2-208ENST00000472230 FLT4P35916 1363 aa23.78■■□□□ 1.4
GCFC2-208ENST00000472230 MARF1Q9Y4F3 1742 aaKnown RBP23.77■■□□□ 1.4
GCFC2-208ENST00000472230 HSP90AB2PQ58FF8 381 aa23.77■■□□□ 1.4
GCFC2-208ENST00000472230 CRBNQ96SW2 442 aa23.76■■□□□ 1.39
GCFC2-208ENST00000472230 C19orf44Q9H6X5 657 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms