RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 STK26Q9P289 416 aa15.68■□□□□ 0.1
CDHR3-209ENST00000472116 WAPLQ7Z5K2 1190 aa15.67■□□□□ 0.1
CDHR3-209ENST00000472116 NRKQ7Z2Y5 1582 aa15.66■□□□□ 0.1
CDHR3-209ENST00000472116 PDE3BQ13370 1112 aa15.65■□□□□ 0.1
CDHR3-209ENST00000472116 NRXN1Q9ULB1 1477 aa15.65■□□□□ 0.1
CDHR3-209ENST00000472116 TECPR2O15040 1411 aa15.64■□□□□ 0.09
CDHR3-209ENST00000472116 GIGYF1O75420 1035 aaPredicted RBP15.64■□□□□ 0.09
CDHR3-209ENST00000472116 MYOM1P52179 1685 aa15.63■□□□□ 0.09
CDHR3-209ENST00000472116 PRDM11Q9NQV5 511 aa15.61■□□□□ 0.09
CDHR3-209ENST00000472116 CASZ1Q86V15 1759 aa15.61■□□□□ 0.09
CDHR3-209ENST00000472116 SPATA31A1Q5TZJ5 1347 aa15.61■□□□□ 0.09
CDHR3-209ENST00000472116 RGPD3A6NKT7 1758 aaPredicted RBP15.6■□□□□ 0.09
CDHR3-209ENST00000472116 RGPD4Q7Z3J3 1758 aa15.6■□□□□ 0.09
CDHR3-209ENST00000472116 ALS2Q96Q42 1657 aa15.6■□□□□ 0.09
CDHR3-209ENST00000472116 PLEKHH1Q9ULM0 1364 aa15.6■□□□□ 0.09
CDHR3-209ENST00000472116 TRPM3Q9HCF6 1732 aaPredicted RBP15.59■□□□□ 0.09
CDHR3-209ENST00000472116 ABCC11Q96J66 1382 aa15.59■□□□□ 0.09
CDHR3-209ENST00000472116 ITGAEP38570 1179 aa15.58■□□□□ 0.08
CDHR3-209ENST00000472116 STRN4Q9NRL3 753 aa15.58■□□□□ 0.08
CDHR3-209ENST00000472116 GPRASP1Q5JY77 1395 aa15.58■□□□□ 0.08
CDHR3-209ENST00000472116 C11orf95C9JLR9 678 aaPredicted RBP15.57■□□□□ 0.08
CDHR3-209ENST00000472116 USP35Q9P2H5 1018 aa15.57■□□□□ 0.08
CDHR3-209ENST00000472116 PMFBP1Q8TBY8 1022 aa15.56■□□□□ 0.08
CDHR3-209ENST00000472116 DLC1Q96QB1 1528 aa15.56■□□□□ 0.08
CDHR3-209ENST00000472116 CRYBG1Q9Y4K1 1723 aa15.56■□□□□ 0.08
CDHR3-209ENST00000472116 ZBTB7AO95365 584 aa15.55■□□□□ 0.08
CDHR3-209ENST00000472116 SYT17Q9BSW7 474 aa15.55■□□□□ 0.08
CDHR3-209ENST00000472116 UTRNP46939 3433 aa15.54■□□□□ 0.08
CDHR3-209ENST00000472116 EVA1CP58658 441 aa15.54■□□□□ 0.08
CDHR3-209ENST00000472116 FHDC1Q9C0D6 1143 aaPredicted RBP15.54■□□□□ 0.08
CDHR3-209ENST00000472116 YTHDC2Q9H6S0 1430 aaKnown RBP15.53■□□□□ 0.08
CDHR3-209ENST00000472116 SBF2Q86WG5 1849 aa15.53■□□□□ 0.08
CDHR3-209ENST00000472116 LOC105371045A0A1W2PR82 267 aa15.53■□□□□ 0.08
CDHR3-209ENST00000472116 TMEM132EQ6IEE7 984 aa15.53■□□□□ 0.08
CDHR3-209ENST00000472116 BARGINQ6ZT62 677 aa15.53■□□□□ 0.08
CDHR3-209ENST00000472116 BCL11BQ9C0K0 894 aaPredicted RBP15.53■□□□□ 0.08
CDHR3-209ENST00000472116 ANKARQ7Z5J8 1434 aa15.52■□□□□ 0.08
CDHR3-209ENST00000472116 CEP350Q5VT06 3117 aa15.52■□□□□ 0.08
CDHR3-209ENST00000472116 ATF5Q9Y2D1 282 aaPredicted RBP15.52■□□□□ 0.08
CDHR3-209ENST00000472116 ADGRF5Q8IZF2 1346 aa15.51■□□□□ 0.07
CDHR3-209ENST00000472116 PAK3O75914 559 aaPredicted RBP15.51■□□□□ 0.07
CDHR3-209ENST00000472116 PPP4R3CPQ6ZMV5 832 aa15.51■□□□□ 0.07
CDHR3-209ENST00000472116 SIRT1Q96EB6 747 aa15.51■□□□□ 0.07
CDHR3-209ENST00000472116 KIAA0232Q92628 1395 aa15.5■□□□□ 0.07
CDHR3-209ENST00000472116 PARP4Q9UKK3 1724 aaKnown RBP15.5■□□□□ 0.07
CDHR3-209ENST00000472116 PLSCR1O15162 318 aa15.49■□□□□ 0.07
CDHR3-209ENST00000472116 PTGER2P43116 358 aa15.49■□□□□ 0.07
CDHR3-209ENST00000472116 CHRNA2Q15822 529 aa15.49■□□□□ 0.07
CDHR3-209ENST00000472116 GPR162Q16538 588 aa15.49■□□□□ 0.07
CDHR3-209ENST00000472116 ANO8Q9HCE9 1232 aaPredicted RBP15.49■□□□□ 0.07
CDHR3-209ENST00000472116 PHRF1Q9P1Y6 1649 aaKnown RBP15.49■□□□□ 0.07
CDHR3-209ENST00000472116 EIF3AQ14152 1382 aaKnown RBP15.49■□□□□ 0.07
CDHR3-209ENST00000472116 ANKRD30BQ9BXX2 1392 aa15.49■□□□□ 0.07
CDHR3-209ENST00000472116 SAFB2Q14151 953 aaKnown RBP eCLIP15.48■□□□□ 0.07
CDHR3-209ENST00000472116 TCP11L2Q8N4U5 519 aa15.48■□□□□ 0.07
CDHR3-209ENST00000472116 STK32BQ9NY57 414 aa15.48■□□□□ 0.07
CDHR3-209ENST00000472116 OVOS2A0A0G2JMS6 1433 aa15.48■□□□□ 0.07
CDHR3-209ENST00000472116 OVOS2A0A0J9YW53 1432 aa15.48■□□□□ 0.07
CDHR3-209ENST00000472116 OVOS2Q6IE36 1432 aa15.48■□□□□ 0.07
CDHR3-209ENST00000472116 SSH2Q76I76 1423 aa15.48■□□□□ 0.07
CDHR3-209ENST00000472116 ACIN1Q9UKV3 1341 aaKnown RBP15.47■□□□□ 0.07
CDHR3-209ENST00000472116 NGDNQ8NEJ9 315 aaKnown RBP15.46■□□□□ 0.07
CDHR3-209ENST00000472116 PDGFDQ9GZP0 370 aaPredicted RBP15.46■□□□□ 0.07
CDHR3-209ENST00000472116 MTFR1LQ9H019 292 aa15.46■□□□□ 0.07
CDHR3-209ENST00000472116 RGL3Q3MIN7 710 aa15.45■□□□□ 0.06
CDHR3-209ENST00000472116 POGKQ9P215 609 aa15.45■□□□□ 0.06
CDHR3-209ENST00000472116 THRAP3Q9Y2W1 955 aaKnown RBP15.45■□□□□ 0.06
CDHR3-209ENST00000472116 DHX57Q6P158 1386 aaKnown RBP15.45■□□□□ 0.06
CDHR3-209ENST00000472116 PIK3C2GO75747 1445 aa15.44■□□□□ 0.06
CDHR3-209ENST00000472116 ITSN1Q15811 1721 aa15.44■□□□□ 0.06
CDHR3-209ENST00000472116 ZC3H6P61129 1189 aaKnown RBP15.44■□□□□ 0.06
CDHR3-209ENST00000472116 PRAM1Q96QH2 718 aa15.44■□□□□ 0.06
CDHR3-209ENST00000472116 ARXQ96QS3 562 aa15.44■□□□□ 0.06
CDHR3-209ENST00000472116 AKAP12Q02952 1782 aa15.44■□□□□ 0.06
CDHR3-209ENST00000472116 PELP1Q8IZL8 1130 aaKnown RBP15.43■□□□□ 0.06
CDHR3-209ENST00000472116 PEAK1Q9H792 1746 aa15.43■□□□□ 0.06
CDHR3-209ENST00000472116 SLC4A1APQ9BWU0 796 aaKnown RBP15.42■□□□□ 0.06
CDHR3-209ENST00000472116 SHANK3Q9BYB0 1731 aa15.42■□□□□ 0.06
CDHR3-209ENST00000472116 MAP3K5Q99683 1374 aa15.41■□□□□ 0.06
CDHR3-209ENST00000472116 HOXD11P31277 338 aaPredicted RBP15.41■□□□□ 0.06
CDHR3-209ENST00000472116 LARP1Q6PKG0 1096 aaKnown RBP15.41■□□□□ 0.06
CDHR3-209ENST00000472116 ATP7BP35670 1465 aa15.4■□□□□ 0.06
CDHR3-209ENST00000472116 SLC15A2Q16348 729 aa15.4■□□□□ 0.06
CDHR3-209ENST00000472116 KLHL34Q8N239 644 aa15.4■□□□□ 0.06
CDHR3-209ENST00000472116 TULP4Q9NRJ4 1543 aa15.39■□□□□ 0.05
CDHR3-209ENST00000472116 LRRC37A3O60309 1634 aa15.39■□□□□ 0.05
CDHR3-209ENST00000472116 DDB1Q16531 1140 aa15.38■□□□□ 0.05
CDHR3-209ENST00000472116 KAT6BQ8WYB5 2073 aa15.37■□□□□ 0.05
CDHR3-209ENST00000472116 HSPA6P17066 643 aa15.37■□□□□ 0.05
CDHR3-209ENST00000472116 TXNRD1Q16881 649 aa15.37■□□□□ 0.05
CDHR3-209ENST00000472116 SGIP1Q9BQI5 828 aa15.37■□□□□ 0.05
CDHR3-209ENST00000472116 LMO7Q8WWI1 1683 aa15.36■□□□□ 0.05
CDHR3-209ENST00000472116 HIRIP3Q9BW71 556 aaPredicted RBP15.36■□□□□ 0.05
CDHR3-209ENST00000472116 C14orf93Q9H972 538 aaKnown RBP15.36■□□□□ 0.05
CDHR3-209ENST00000472116 TOPAZ1Q8N9V7 1692 aa15.35■□□□□ 0.05
CDHR3-209ENST00000472116 NUTM2GQ5VZR2 741 aa15.35■□□□□ 0.05
CDHR3-209ENST00000472116 WNK3Q9BYP7 1800 aa15.35■□□□□ 0.05
CDHR3-209ENST00000472116 CRB1P82279 1406 aa15.34■□□□□ 0.05
CDHR3-209ENST00000472116 SPATA31E1Q6ZUB1 1445 aa15.34■□□□□ 0.05
CDHR3-209ENST00000472116 PROM2Q8N271 834 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms