RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 ZEB1P37275 1124 aaPredicted RBP21.06■□□□□ 0.96
SNX13-205ENST00000471744 TERF2IPQ9NYB0 399 aa21.06■□□□□ 0.96
SNX13-205ENST00000471744 LMOD2Q6P5Q4 547 aa21.05■□□□□ 0.96
SNX13-205ENST00000471744 HDGFL2Q7Z4V5 671 aaPredicted RBP21.05■□□□□ 0.96
SNX13-205ENST00000471744 SLC12A5Q9H2X9 1139 aa21.04■□□□□ 0.96
SNX13-205ENST00000471744 KTN1Q86UP2 1357 aaKnown RBP21.04■□□□□ 0.96
SNX13-205ENST00000471744 NUTM2BA6NNL0 878 aaPredicted RBP21.03■□□□□ 0.96
SNX13-205ENST00000471744 NUTM2EB1AL46 878 aaPredicted RBP21.03■□□□□ 0.96
SNX13-205ENST00000471744 NUTM2AQ8IVF1 878 aaPredicted RBP21.03■□□□□ 0.96
SNX13-205ENST00000471744 LRP6O75581 1613 aa21.03■□□□□ 0.96
SNX13-205ENST00000471744 MARF1Q9Y4F3 1742 aaKnown RBP21.02■□□□□ 0.96
SNX13-205ENST00000471744 MEX3CQ5U5Q3 659 aaKnown RBP21.02■□□□□ 0.96
SNX13-205ENST00000471744 SSH2Q76I76 1423 aa21.02■□□□□ 0.96
SNX13-205ENST00000471744 NRKQ7Z2Y5 1582 aa21.02■□□□□ 0.95
SNX13-205ENST00000471744 CD163L1Q9NR16 1453 aa21.01■□□□□ 0.95
SNX13-205ENST00000471744 ABCA3Q99758 1704 aa21.01■□□□□ 0.95
SNX13-205ENST00000471744 TTC21AQ8NDW8 1320 aa21.01■□□□□ 0.95
SNX13-205ENST00000471744 MYOM1P52179 1685 aa20.99■□□□□ 0.95
SNX13-205ENST00000471744 ANKRD36BQ8N2N9 1353 aa20.99■□□□□ 0.95
SNX13-205ENST00000471744 EDC4Q6P2E9 1401 aaKnown RBP20.99■□□□□ 0.95
SNX13-205ENST00000471744 HAP1P54257 671 aaPredicted RBP20.99■□□□□ 0.95
SNX13-205ENST00000471744 ABTB2Q8N961 1025 aa20.99■□□□□ 0.95
SNX13-205ENST00000471744 A0A1W2PP64 1363 aa20.98■□□□□ 0.95
SNX13-205ENST00000471744 CRYBG1Q9Y4K1 1723 aa20.98■□□□□ 0.95
SNX13-205ENST00000471744 TTC21BQ7Z4L5 1316 aa20.98■□□□□ 0.95
SNX13-205ENST00000471744 NLRP13Q86W25 1043 aa20.97■□□□□ 0.95
SNX13-205ENST00000471744 PIK3C2AO00443 1686 aa20.96■□□□□ 0.95
SNX13-205ENST00000471744 PHRF1Q9P1Y6 1649 aaKnown RBP20.94■□□□□ 0.94
SNX13-205ENST00000471744 ADAMTS2O95450 1211 aa20.94■□□□□ 0.94
SNX13-205ENST00000471744 NLRP6P59044 892 aa20.93■□□□□ 0.94
SNX13-205ENST00000471744 CABLES1Q8TDN4 633 aa20.93■□□□□ 0.94
SNX13-205ENST00000471744 POLR3GLQ9BT43 218 aa20.93■□□□□ 0.94
SNX13-205ENST00000471744 USP19O94966 1318 aa20.93■□□□□ 0.94
SNX13-205ENST00000471744 USP54Q70EL1 1684 aa20.93■□□□□ 0.94
SNX13-205ENST00000471744 NUTM2GQ5VZR2 741 aa20.91■□□□□ 0.94
SNX13-205ENST00000471744 NGLY1Q96IV0 654 aa20.91■□□□□ 0.94
SNX13-205ENST00000471744 C8orf37Q96NL8 207 aa20.91■□□□□ 0.94
SNX13-205ENST00000471744 ZNF772Q68DY9 489 aaPredicted RBP20.9■□□□□ 0.94
SNX13-205ENST00000471744 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.9■□□□□ 0.94
SNX13-205ENST00000471744 USP31Q70CQ4 1352 aa20.89■□□□□ 0.93
SNX13-205ENST00000471744 C11orf95C9JLR9 678 aaPredicted RBP20.89■□□□□ 0.93
SNX13-205ENST00000471744 PLEKHG5O94827 1062 aa20.89■□□□□ 0.93
SNX13-205ENST00000471744 SLIT3O75094 1523 aa20.88■□□□□ 0.93
SNX13-205ENST00000471744 AFF2P51816 1311 aa20.88■□□□□ 0.93
SNX13-205ENST00000471744 KIF7Q2M1P5 1343 aa20.88■□□□□ 0.93
SNX13-205ENST00000471744 NWD2Q9ULI1 1742 aa20.87■□□□□ 0.93
SNX13-205ENST00000471744 FNBP4Q8N3X1 1017 aaPredicted RBP20.87■□□□□ 0.93
SNX13-205ENST00000471744 KCNH5Q8NCM2 988 aa20.87■□□□□ 0.93
SNX13-205ENST00000471744 COL14A1Q05707 1796 aaKnown RBP20.87■□□□□ 0.93
SNX13-205ENST00000471744 KIF20BQ96Q89 1820 aa20.86■□□□□ 0.93
SNX13-205ENST00000471744 GCP02774 474 aa20.86■□□□□ 0.93
SNX13-205ENST00000471744 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.85■□□□□ 0.93
SNX13-205ENST00000471744 ILDR2Q71H61 639 aa20.85■□□□□ 0.93
SNX13-205ENST00000471744 NME9Q86XW9 330 aa20.85■□□□□ 0.93
SNX13-205ENST00000471744 PLCH1Q4KWH8 1693 aa20.85■□□□□ 0.93
SNX13-205ENST00000471744 CPDO75976 1380 aa20.85■□□□□ 0.93
SNX13-205ENST00000471744 CCDC7Q96M83 1385 aa20.85■□□□□ 0.93
SNX13-205ENST00000471744 PRDM11Q9NQV5 511 aa20.84■□□□□ 0.93
SNX13-205ENST00000471744 RGS17Q9UGC6 210 aaPredicted RBP20.84■□□□□ 0.93
SNX13-205ENST00000471744 NSD3Q9BZ95 1437 aa20.84■□□□□ 0.93
SNX13-205ENST00000471744 SLIT2O94813 1529 aa20.83■□□□□ 0.93
SNX13-205ENST00000471744 OVOS2A0A0J9YW53 1432 aa20.83■□□□□ 0.93
SNX13-205ENST00000471744 OVOS2Q6IE36 1432 aa20.83■□□□□ 0.93
SNX13-205ENST00000471744 KIAA0232Q92628 1395 aa20.83■□□□□ 0.92
SNX13-205ENST00000471744 COG3Q96JB2 828 aa20.82■□□□□ 0.92
SNX13-205ENST00000471744 CARD14Q9BXL6 1004 aa20.82■□□□□ 0.92
SNX13-205ENST00000471744 USP21Q9UK80 565 aa20.82■□□□□ 0.92
SNX13-205ENST00000471744 CGNL1Q0VF96 1302 aa20.81■□□□□ 0.92
SNX13-205ENST00000471744 FAM83GA6ND36 823 aa20.81■□□□□ 0.92
SNX13-205ENST00000471744 ZC3H6P61129 1189 aaKnown RBP20.81■□□□□ 0.92
SNX13-205ENST00000471744 PANK3Q9H999 370 aa20.81■□□□□ 0.92
SNX13-205ENST00000471744 WASHC2AQ641Q2 1341 aa20.8■□□□□ 0.92
SNX13-205ENST00000471744 NFAT5O94916 1531 aa20.79■□□□□ 0.92
SNX13-205ENST00000471744 FYB1O15117 783 aa20.79■□□□□ 0.92
SNX13-205ENST00000471744 UNC5CLQ8IV45 518 aa20.79■□□□□ 0.92
SNX13-205ENST00000471744 TRPC5Q9UL62 973 aaPredicted RBP20.79■□□□□ 0.92
SNX13-205ENST00000471744 BCL9LQ86UU0 1499 aa20.79■□□□□ 0.92
SNX13-205ENST00000471744 ZRANB1Q9UGI0 708 aa20.78■□□□□ 0.92
SNX13-205ENST00000471744 QTRT2Q9H974 415 aaKnown RBP20.77■□□□□ 0.92
SNX13-205ENST00000471744 NRAPQ86VF7 1730 aa20.77■□□□□ 0.92
SNX13-205ENST00000471744 ABCC6O95255 1503 aa20.77■□□□□ 0.92
SNX13-205ENST00000471744 ANKRD26Q9UPS8 1709 aa20.76■□□□□ 0.91
SNX13-205ENST00000471744 AATKQ6ZMQ8 1374 aa20.76■□□□□ 0.91
SNX13-205ENST00000471744 POTEAQ6S8J7 498 aa20.76■□□□□ 0.91
SNX13-205ENST00000471744 ATRNO75882 1429 aa20.76■□□□□ 0.91
SNX13-205ENST00000471744 LMO7Q8WWI1 1683 aa20.76■□□□□ 0.91
SNX13-205ENST00000471744 NSD2O96028 1365 aa20.75■□□□□ 0.91
SNX13-205ENST00000471744 LTN1O94822 1766 aa20.75■□□□□ 0.91
SNX13-205ENST00000471744 MSH5O43196 834 aa20.75■□□□□ 0.91
SNX13-205ENST00000471744 ARHGEF25Q86VW2 580 aa20.75■□□□□ 0.91
SNX13-205ENST00000471744 GGNBP2Q9H3C7 697 aa20.75■□□□□ 0.91
SNX13-205ENST00000471744 BTG4Q9NY30 223 aa20.75■□□□□ 0.91
SNX13-205ENST00000471744 KNSTRNQ9Y448 316 aa20.75■□□□□ 0.91
SNX13-205ENST00000471744 SOX12O15370 315 aa20.74■□□□□ 0.91
SNX13-205ENST00000471744 CHRNA2Q15822 529 aa20.74■□□□□ 0.91
SNX13-205ENST00000471744 COL18A1P39060 1754 aa20.74■□□□□ 0.91
SNX13-205ENST00000471744 SOCS7O14512 581 aa20.73■□□□□ 0.91
SNX13-205ENST00000471744 RBM6P78332 1123 aaKnown RBP20.73■□□□□ 0.91
SNX13-205ENST00000471744 RXRBP28702 533 aa20.72■□□□□ 0.91
SNX13-205ENST00000471744 VPS72Q15906 364 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms