RNA–Protein interactions for RNA: ENST00000471640.1

NCKAP1-203, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 306 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-203ENST00000471640 TUSC1Q2TAM9 212 aa5.66□□□□□ -1.5
NCKAP1-203ENST00000471640 RSPH6AQ9H0K4 717 aa5.66□□□□□ -1.5
NCKAP1-203ENST00000471640 WASF2Q9Y6W5 498 aa5.66□□□□□ -1.5
NCKAP1-203ENST00000471640 SIAH2O43255 324 aa5.65□□□□□ -1.5
NCKAP1-203ENST00000471640 JUNDP17535 347 aa5.65□□□□□ -1.5
NCKAP1-203ENST00000471640 PRPF38BQ5VTL8 546 aaKnown RBP5.65□□□□□ -1.5
NCKAP1-203ENST00000471640 RIC3Q7Z5B4 369 aa5.65□□□□□ -1.5
NCKAP1-203ENST00000471640 DDRGK1Q96HY6 314 aa5.65□□□□□ -1.5
NCKAP1-203ENST00000471640 KDM4CQ9H3R0 1056 aa5.65□□□□□ -1.5
NCKAP1-203ENST00000471640 ERBB4Q15303 1308 aa5.65□□□□□ -1.51
NCKAP1-203ENST00000471640 SCARF1Q14162 830 aa5.64□□□□□ -1.51
NCKAP1-203ENST00000471640 MYSM1Q5VVJ2 828 aa5.64□□□□□ -1.51
NCKAP1-203ENST00000471640 DESI1Q6ICB0 168 aa5.64□□□□□ -1.51
NCKAP1-203ENST00000471640 TRIM46Q7Z4K8 759 aa5.64□□□□□ -1.51
NCKAP1-203ENST00000471640 KCTD17Q8N5Z5 321 aa5.64□□□□□ -1.51
NCKAP1-203ENST00000471640 ZBTB3Q9H5J0 574 aa5.64□□□□□ -1.51
NCKAP1-203ENST00000471640 PLEKHG3A1L390 1219 aa5.63□□□□□ -1.51
NCKAP1-203ENST00000471640 GDF11O95390 407 aa5.63□□□□□ -1.51
NCKAP1-203ENST00000471640 SKOR1P84550 965 aa5.63□□□□□ -1.51
NCKAP1-203ENST00000471640 TPRNQ4KMQ1 711 aa5.63□□□□□ -1.51
NCKAP1-203ENST00000471640 MPNDQ8N594 471 aa5.63□□□□□ -1.51
NCKAP1-203ENST00000471640 SYMPKQ92797 1274 aaKnown RBP5.63□□□□□ -1.51
NCKAP1-203ENST00000471640 GPBP1L1Q9HC44 474 aaPredicted RBP5.63□□□□□ -1.51
NCKAP1-203ENST00000471640 GSK3AP49840 483 aa5.62□□□□□ -1.51
NCKAP1-203ENST00000471640 RASSF7Q02833 373 aa5.62□□□□□ -1.51
NCKAP1-203ENST00000471640 CCDC24Q8N4L8 307 aa5.62□□□□□ -1.51
NCKAP1-203ENST00000471640 EHBP1Q8NDI1 1231 aa5.62□□□□□ -1.51
NCKAP1-203ENST00000471640 PRR7Q8TB68 274 aa5.62□□□□□ -1.51
NCKAP1-203ENST00000471640 ZFP42Q96MM3 310 aa5.62□□□□□ -1.51
NCKAP1-203ENST00000471640 HRCP23327 699 aa5.61□□□□□ -1.51
NCKAP1-203ENST00000471640 CLK2P49760 499 aaKnown RBP5.61□□□□□ -1.51
NCKAP1-203ENST00000471640 FOXK2Q01167 660 aa5.61□□□□□ -1.51
NCKAP1-203ENST00000471640 PTPRNQ16849 979 aa5.61□□□□□ -1.51
NCKAP1-203ENST00000471640 SH3D19Q5HYK7 790 aa5.61□□□□□ -1.51
NCKAP1-203ENST00000471640 NUDT12Q9BQG2 462 aa5.61□□□□□ -1.51
NCKAP1-203ENST00000471640 LIMD1Q9UGP4 676 aa5.61□□□□□ -1.51
NCKAP1-203ENST00000471640 PCDHB15Q9Y5E8 787 aa5.61□□□□□ -1.51
NCKAP1-203ENST00000471640 CCNYL3P0C7X3 344 aa5.6□□□□□ -1.51
NCKAP1-203ENST00000471640 VEGFBP49765 207 aa5.6□□□□□ -1.51
NCKAP1-203ENST00000471640 FAM117AQ9C073 453 aa5.6□□□□□ -1.51
NCKAP1-203ENST00000471640 LILRB3O75022 631 aa5.59□□□□□ -1.51
NCKAP1-203ENST00000471640 BMP1P13497 986 aa5.59□□□□□ -1.51
NCKAP1-203ENST00000471640 SKIV2LQ15477 1246 aaKnown RBP5.59□□□□□ -1.51
NCKAP1-203ENST00000471640 NEUROD2Q15784 382 aa5.59□□□□□ -1.51
NCKAP1-203ENST00000471640 NUTM2BA6NNL0 878 aaPredicted RBP5.58□□□□□ -1.52
NCKAP1-203ENST00000471640 NUTM2EB1AL46 878 aaPredicted RBP5.58□□□□□ -1.52
NCKAP1-203ENST00000471640 CSPP1Q1MSJ5 1256 aa5.58□□□□□ -1.52
NCKAP1-203ENST00000471640 NUTM2DQ5VT03 806 aaPredicted RBP5.58□□□□□ -1.52
NCKAP1-203ENST00000471640 MRPL14Q6P1L8 145 aaKnown RBP5.58□□□□□ -1.52
NCKAP1-203ENST00000471640 NUTM2AQ8IVF1 878 aaPredicted RBP5.58□□□□□ -1.52
NCKAP1-203ENST00000471640 CABLES1Q8TDN4 633 aa5.58□□□□□ -1.52
NCKAP1-203ENST00000471640 POLR3EQ9NVU0 708 aa5.58□□□□□ -1.52
NCKAP1-203ENST00000471640 CFAP99D6REC4 459 aa5.57□□□□□ -1.52
NCKAP1-203ENST00000471640 BRPF1P55201 1214 aaPredicted RBP5.57□□□□□ -1.52
NCKAP1-203ENST00000471640 QPCTQ16769 361 aa5.57□□□□□ -1.52
NCKAP1-203ENST00000471640 LYPD8Q6UX82 237 aa5.57□□□□□ -1.52
NCKAP1-203ENST00000471640 HELBQ8NG08 1087 aaPredicted RBP5.57□□□□□ -1.52
NCKAP1-203ENST00000471640 GOPCQ9HD26 462 aa5.57□□□□□ -1.52
NCKAP1-203ENST00000471640 EVA1BQ9NVM1 165 aa5.57□□□□□ -1.52
NCKAP1-203ENST00000471640 DNMT3AQ9Y6K1 912 aaPredicted RBP5.57□□□□□ -1.52
NCKAP1-203ENST00000471640 VARSP26640 1264 aaKnown RBP5.56□□□□□ -1.52
NCKAP1-203ENST00000471640 KCNH2Q12809 1159 aa5.56□□□□□ -1.52
NCKAP1-203ENST00000471640 KANK3Q6NY19 840 aa5.56□□□□□ -1.52
NCKAP1-203ENST00000471640 ADAMTS8Q9UP79 889 aa5.56□□□□□ -1.52
NCKAP1-203ENST00000471640 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.55□□□□□ -1.52
NCKAP1-203ENST00000471640 ADH1CP00326 375 aa5.54□□□□□ -1.52
NCKAP1-203ENST00000471640 F12P00748 615 aaPredicted RBP5.54□□□□□ -1.52
NCKAP1-203ENST00000471640 RTL5Q5HYW3 569 aaPredicted RBP5.54□□□□□ -1.52
NCKAP1-203ENST00000471640 PPP2R2DQ66LE6 453 aa5.54□□□□□ -1.52
NCKAP1-203ENST00000471640 PTCRAQ6ISU1 281 aaPredicted RBP5.54□□□□□ -1.52
NCKAP1-203ENST00000471640 TSC1Q92574 1164 aa5.54□□□□□ -1.52
NCKAP1-203ENST00000471640 UNC93B1Q9H1C4 597 aa5.54□□□□□ -1.52
NCKAP1-203ENST00000471640 MAN1A2O60476 641 aa5.53□□□□□ -1.52
NCKAP1-203ENST00000471640 SH3BP2P78314 561 aa5.53□□□□□ -1.52
NCKAP1-203ENST00000471640 PPFIA3O75145 1194 aa5.52□□□□□ -1.53
NCKAP1-203ENST00000471640 CTHP32929 405 aa5.52□□□□□ -1.53
NCKAP1-203ENST00000471640 NNTQ13423 1086 aa5.52□□□□□ -1.53
NCKAP1-203ENST00000471640 PROCA1Q8NCQ7 364 aaPredicted RBP5.52□□□□□ -1.53
NCKAP1-203ENST00000471640 PCMTD1Q96MG8 357 aaPredicted RBP5.52□□□□□ -1.53
NCKAP1-203ENST00000471640 PURBQ96QR8 312 aaKnown RBP5.52□□□□□ -1.53
NCKAP1-203ENST00000471640 ATP1B4Q9UN42 357 aaPredicted RBP5.52□□□□□ -1.53
NCKAP1-203ENST00000471640 PER1O15534 1290 aaPredicted RBP5.51□□□□□ -1.53
NCKAP1-203ENST00000471640 UPP2O95045 317 aa5.51□□□□□ -1.53
NCKAP1-203ENST00000471640 TIMP2P16035 220 aa5.51□□□□□ -1.53
NCKAP1-203ENST00000471640 ZNF511Q8NB15 262 aa5.51□□□□□ -1.53
NCKAP1-203ENST00000471640 ARMC2Q8NEN0 867 aa5.51□□□□□ -1.53
NCKAP1-203ENST00000471640 IL27Q8NEV9 243 aa5.51□□□□□ -1.53
NCKAP1-203ENST00000471640 MAP10Q9P2G4 905 aa5.51□□□□□ -1.53
NCKAP1-203ENST00000471640 WDR4P57081 412 aaKnown RBP5.5□□□□□ -1.53
NCKAP1-203ENST00000471640 SCARF2Q96GP6 870 aaPredicted RBP5.5□□□□□ -1.53
NCKAP1-203ENST00000471640 KLF16Q9BXK1 252 aaPredicted RBP5.5□□□□□ -1.53
NCKAP1-203ENST00000471640 LINC01559Q495D7 138 aa5.49□□□□□ -1.53
NCKAP1-203ENST00000471640 NBPF14Q5TI25 921 aa5.49□□□□□ -1.53
NCKAP1-203ENST00000471640 GPAT2Q6NUI2 795 aa5.49□□□□□ -1.53
NCKAP1-203ENST00000471640 NANOS1Q8WY41 292 aaKnown RBP5.49□□□□□ -1.53
NCKAP1-203ENST00000471640 BAP1Q92560 729 aa5.49□□□□□ -1.53
NCKAP1-203ENST00000471640 RFC5P40937 340 aa5.48□□□□□ -1.53
NCKAP1-203ENST00000471640 CTDSPL2Q05D32 466 aa5.48□□□□□ -1.53
NCKAP1-203ENST00000471640 NR5A1Q13285 461 aa5.48□□□□□ -1.53
NCKAP1-203ENST00000471640 FAM174AQ8TBP5 190 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms