RNA–Protein interactions for RNA: ENST00000471387.6

YIF1A-205, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 5 BASIC

Gene YIF1A, Length 854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-205ENST00000471387 NEUROD1Q13562 356 aa30.33■■■□□ 2.45
YIF1A-205ENST00000471387 EP400Q96L91 3159 aa30.32■■■□□ 2.44
YIF1A-205ENST00000471387 NRAPQ86VF7 1730 aa30.31■■■□□ 2.44
YIF1A-205ENST00000471387 ACEP12821 1306 aa30.3■■■□□ 2.44
YIF1A-205ENST00000471387 CCDC61Q9Y6R9 512 aa30.3■■■□□ 2.44
YIF1A-205ENST00000471387 CENPJQ9HC77 1338 aaPredicted RBP30.29■■■□□ 2.44
YIF1A-205ENST00000471387 POLR3AO14802 1390 aaPredicted RBP30.28■■■□□ 2.44
YIF1A-205ENST00000471387 QRICH2Q9H0J4 1663 aa30.28■■■□□ 2.44
YIF1A-205ENST00000471387 NBPF8Q3BBV2 869 aa30.28■■■□□ 2.44
YIF1A-205ENST00000471387 CCDC9Q9Y3X0 531 aaKnown RBP30.28■■■□□ 2.44
YIF1A-205ENST00000471387 TRPM1Q7Z4N2 1603 aa30.27■■■□□ 2.44
YIF1A-205ENST00000471387 PLEKHG3A1L390 1219 aa30.27■■■□□ 2.44
YIF1A-205ENST00000471387 BTG4Q9NY30 223 aa30.27■■■□□ 2.44
YIF1A-205ENST00000471387 COL14A1Q05707 1796 aaKnown RBP30.27■■■□□ 2.44
YIF1A-205ENST00000471387 NUTM2GQ5VZR2 741 aa30.26■■■□□ 2.43
YIF1A-205ENST00000471387 SEPT12Q8IYM1 358 aa30.26■■■□□ 2.43
YIF1A-205ENST00000471387 CABP2Q9NPB3 220 aa30.25■■■□□ 2.43
YIF1A-205ENST00000471387 ONECUT3O60422 494 aaPredicted RBP30.24■■■□□ 2.43
YIF1A-205ENST00000471387 PHRF1Q9P1Y6 1649 aaKnown RBP30.23■■■□□ 2.43
YIF1A-205ENST00000471387 SRPK2P78362 688 aaKnown RBP30.23■■■□□ 2.43
YIF1A-205ENST00000471387 PPIP5K1Q6PFW1 1433 aa30.19■■■□□ 2.42
YIF1A-205ENST00000471387 KIAA0232Q92628 1395 aa30.18■■■□□ 2.42
YIF1A-205ENST00000471387 CHRNA2Q15822 529 aa30.18■■■□□ 2.42
YIF1A-205ENST00000471387 PRDM11Q9NQV5 511 aa30.18■■■□□ 2.42
YIF1A-205ENST00000471387 ZC3H6P61129 1189 aaKnown RBP30.16■■■□□ 2.42
YIF1A-205ENST00000471387 FAM98CQ17RN3 349 aaKnown RBP30.16■■■□□ 2.42
YIF1A-205ENST00000471387 CCDC125Q86Z20 511 aa30.15■■■□□ 2.42
YIF1A-205ENST00000471387 ABTB2Q8N961 1025 aa30.14■■■□□ 2.42
YIF1A-205ENST00000471387 CABP1Q9NZU7 370 aa30.14■■■□□ 2.42
YIF1A-205ENST00000471387 ROCK2O75116 1388 aaKnown RBP30.14■■■□□ 2.41
YIF1A-205ENST00000471387 KRT27Q7Z3Y8 459 aa30.13■■■□□ 2.41
YIF1A-205ENST00000471387 SPATA31A5Q5VU36 1347 aa30.13■■■□□ 2.41
YIF1A-205ENST00000471387 SPATA31A7Q8IWB4 1347 aa30.13■■■□□ 2.41
YIF1A-205ENST00000471387 A0A0G2JS52 829 aa30.1■■■□□ 2.41
YIF1A-205ENST00000471387 MYT1Q01538 1121 aa30.1■■■□□ 2.41
YIF1A-205ENST00000471387 NRKQ7Z2Y5 1582 aa30.1■■■□□ 2.41
YIF1A-205ENST00000471387 BLMP54132 1417 aaPredicted RBP30.09■■■□□ 2.41
YIF1A-205ENST00000471387 USP19O94966 1318 aa30.08■■■□□ 2.41
YIF1A-205ENST00000471387 DEFB132Q7Z7B7 95 aa30.07■■■□□ 2.4
YIF1A-205ENST00000471387 STRN4Q9NRL3 753 aa30.07■■■□□ 2.4
YIF1A-205ENST00000471387 EVC2Q86UK5 1308 aa30.06■■■□□ 2.4
YIF1A-205ENST00000471387 USP6P35125 1406 aa30.05■■■□□ 2.4
YIF1A-205ENST00000471387 THSD7AQ9UPZ6 1657 aa30.04■■■□□ 2.4
YIF1A-205ENST00000471387 CAMTA1Q9Y6Y1 1673 aa30.04■■■□□ 2.4
YIF1A-205ENST00000471387 SPATA31A1Q5TZJ5 1347 aa30.04■■■□□ 2.4
YIF1A-205ENST00000471387 FAM182BQ5T319 152 aa30.04■■■□□ 2.4
YIF1A-205ENST00000471387 NLRP13Q86W25 1043 aa30.03■■■□□ 2.4
YIF1A-205ENST00000471387 GCP02774 474 aa30.02■■■□□ 2.4
YIF1A-205ENST00000471387 LMO7Q8WWI1 1683 aa30.01■■■□□ 2.4
YIF1A-205ENST00000471387 SSH2Q76I76 1423 aa30.01■■■□□ 2.39
YIF1A-205ENST00000471387 CPDO75976 1380 aa30.01■■■□□ 2.39
YIF1A-205ENST00000471387 BRD4O60885 1362 aaPredicted RBP29.99■■■□□ 2.39
YIF1A-205ENST00000471387 AKAP12Q02952 1782 aa29.98■■■□□ 2.39
YIF1A-205ENST00000471387 NLRP6P59044 892 aa29.98■■■□□ 2.39
YIF1A-205ENST00000471387 ZRANB1Q9UGI0 708 aa29.98■■■□□ 2.39
YIF1A-205ENST00000471387 PIK3C2AO00443 1686 aa29.98■■■□□ 2.39
YIF1A-205ENST00000471387 EVA1CP58658 441 aa29.97■■■□□ 2.39
YIF1A-205ENST00000471387 LARP1Q6PKG0 1096 aaKnown RBP29.97■■■□□ 2.39
YIF1A-205ENST00000471387 USP35Q9P2H5 1018 aa29.97■■■□□ 2.39
YIF1A-205ENST00000471387 SF3B2Q13435 895 aaKnown RBP29.95■■■□□ 2.39
YIF1A-205ENST00000471387 CARD11Q9BXL7 1154 aa29.95■■■□□ 2.39
YIF1A-205ENST00000471387 TRIM26Q12899 539 aaPredicted RBP29.94■■■□□ 2.38
YIF1A-205ENST00000471387 TONSLQ96HA7 1378 aa29.93■■■□□ 2.38
YIF1A-205ENST00000471387 SLIT3O75094 1523 aa29.93■■■□□ 2.38
YIF1A-205ENST00000471387 ZBTB7CA1YPR0 619 aa29.91■■■□□ 2.38
YIF1A-205ENST00000471387 TTC21BQ7Z4L5 1316 aa29.91■■■□□ 2.38
YIF1A-205ENST00000471387 ZNF692Q9BU19 519 aaPredicted RBP29.9■■■□□ 2.38
YIF1A-205ENST00000471387 CPSF1Q10570 1443 aaKnown RBP29.89■■■□□ 2.38
YIF1A-205ENST00000471387 COL18A1P39060 1754 aa29.89■■■□□ 2.38
YIF1A-205ENST00000471387 SBNO2Q9Y2G9 1366 aa29.89■■■□□ 2.37
YIF1A-205ENST00000471387 COL5A2P05997 1499 aaPredicted RBP29.88■■■□□ 2.37
YIF1A-205ENST00000471387 BARGINQ6ZT62 677 aa29.88■■■□□ 2.37
YIF1A-205ENST00000471387 RGPD1P0DJD0 1748 aa29.87■■■□□ 2.37
YIF1A-205ENST00000471387 SRCAPQ6ZRS2 3230 aa29.86■■■□□ 2.37
YIF1A-205ENST00000471387 TNS1Q9HBL0 1735 aaKnown RBP29.85■■■□□ 2.37
YIF1A-205ENST00000471387 TCP11L2Q8N4U5 519 aa29.85■■■□□ 2.37
YIF1A-205ENST00000471387 MON2Q7Z3U7 1717 aa29.85■■■□□ 2.37
YIF1A-205ENST00000471387 RGPD5Q99666 1765 aa29.85■■■□□ 2.37
YIF1A-205ENST00000471387 BAG6P46379 1132 aa29.84■■■□□ 2.37
YIF1A-205ENST00000471387 EN1Q05925 392 aaPredicted RBP29.84■■■□□ 2.37
YIF1A-205ENST00000471387 AXIN2Q9Y2T1 843 aa29.84■■■□□ 2.37
YIF1A-205ENST00000471387 AATKQ6ZMQ8 1374 aa29.84■■■□□ 2.37
YIF1A-205ENST00000471387 KTN1Q86UP2 1357 aaKnown RBP29.84■■■□□ 2.37
YIF1A-205ENST00000471387 CD163L1Q9NR16 1453 aa29.82■■■□□ 2.36
YIF1A-205ENST00000471387 TTC21AQ8NDW8 1320 aa29.81■■■□□ 2.36
YIF1A-205ENST00000471387 SOX12O15370 315 aa29.81■■■□□ 2.36
YIF1A-205ENST00000471387 TRIM37O94972 964 aa29.8■■■□□ 2.36
YIF1A-205ENST00000471387 FAM196AQ6ZSG2 479 aa29.79■■■□□ 2.36
YIF1A-205ENST00000471387 ARHGEF25Q86VW2 580 aa29.79■■■□□ 2.36
YIF1A-205ENST00000471387 SLC12A5Q9H2X9 1139 aa29.79■■■□□ 2.36
YIF1A-205ENST00000471387 THRAP3Q9Y2W1 955 aaKnown RBP29.79■■■□□ 2.36
YIF1A-205ENST00000471387 CRB1P82279 1406 aa29.79■■■□□ 2.36
YIF1A-205ENST00000471387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.78■■■□□ 2.36
YIF1A-205ENST00000471387 PARP4Q9UKK3 1724 aaKnown RBP29.77■■■□□ 2.36
YIF1A-205ENST00000471387 PDE3BQ13370 1112 aa29.77■■■□□ 2.36
YIF1A-205ENST00000471387 TMC1Q8TDI8 760 aa29.77■■■□□ 2.36
YIF1A-205ENST00000471387 NFAT5O94916 1531 aa29.76■■■□□ 2.35
YIF1A-205ENST00000471387 EZH2Q15910 746 aaKnown RBP29.74■■■□□ 2.35
YIF1A-205ENST00000471387 KCNH5Q8NCM2 988 aa29.74■■■□□ 2.35
YIF1A-205ENST00000471387 TESK2Q96S53 571 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms