RNA–Protein interactions for RNA: ENST00000471143.5

TSC2-212, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-212ENST00000471143 VPS72Q15906 364 aa17.1■□□□□ 0.33
TSC2-212ENST00000471143 NUTM2GQ5VZR2 741 aa17.1■□□□□ 0.33
TSC2-212ENST00000471143 ABTB2Q8N961 1025 aa17.09■□□□□ 0.33
TSC2-212ENST00000471143 PPIP5K1Q6PFW1 1433 aa17.09■□□□□ 0.33
TSC2-212ENST00000471143 BTG4Q9NY30 223 aa17.08■□□□□ 0.32
TSC2-212ENST00000471143 TRPM1Q7Z4N2 1603 aa17.07■□□□□ 0.32
TSC2-212ENST00000471143 TRPM3Q9HCF6 1732 aaPredicted RBP17.07■□□□□ 0.32
TSC2-212ENST00000471143 ONECUT3O60422 494 aaPredicted RBP17.06■□□□□ 0.32
TSC2-212ENST00000471143 ZC3H6P61129 1189 aaKnown RBP17.05■□□□□ 0.32
TSC2-212ENST00000471143 NLRP13Q86W25 1043 aa17.05■□□□□ 0.32
TSC2-212ENST00000471143 ZNF692Q9BU19 519 aaPredicted RBP17.05■□□□□ 0.32
TSC2-212ENST00000471143 PRDM11Q9NQV5 511 aa17.05■□□□□ 0.32
TSC2-212ENST00000471143 CCDC9Q9Y3X0 531 aaKnown RBP17.05■□□□□ 0.32
TSC2-212ENST00000471143 RALGAPBQ86X10 1494 aa17.05■□□□□ 0.32
TSC2-212ENST00000471143 BRD4O60885 1362 aaPredicted RBP17.04■□□□□ 0.32
TSC2-212ENST00000471143 PCGF6Q9BYE7 350 aa17.04■□□□□ 0.32
TSC2-212ENST00000471143 ALS2Q96Q42 1657 aa17.04■□□□□ 0.32
TSC2-212ENST00000471143 CHRNA2Q15822 529 aa17.03■□□□□ 0.32
TSC2-212ENST00000471143 KIAA0232Q92628 1395 aa17.02■□□□□ 0.32
TSC2-212ENST00000471143 SBNO2Q9Y2G9 1366 aa17.02■□□□□ 0.32
TSC2-212ENST00000471143 GCP02774 474 aa17.02■□□□□ 0.32
TSC2-212ENST00000471143 SEPT12Q8IYM1 358 aa17.02■□□□□ 0.32
TSC2-212ENST00000471143 USP19O94966 1318 aa17.01■□□□□ 0.31
TSC2-212ENST00000471143 NLRP6P59044 892 aa17.01■□□□□ 0.31
TSC2-212ENST00000471143 USP6P35125 1406 aa17.01■□□□□ 0.31
TSC2-212ENST00000471143 ATAD2Q6PL18 1390 aa17.01■□□□□ 0.31
TSC2-212ENST00000471143 SSH2Q76I76 1423 aa17■□□□□ 0.31
TSC2-212ENST00000471143 MARF1Q9Y4F3 1742 aaKnown RBP17■□□□□ 0.31
TSC2-212ENST00000471143 TOPAZ1Q8N9V7 1692 aa17■□□□□ 0.31
TSC2-212ENST00000471143 QRICH2Q9H0J4 1663 aa17■□□□□ 0.31
TSC2-212ENST00000471143 ITSN1Q15811 1721 aa16.99■□□□□ 0.31
TSC2-212ENST00000471143 ST20-MTHFSA0A0A6YYL1 179 aa16.99■□□□□ 0.31
TSC2-212ENST00000471143 TIMELESSQ9UNS1 1208 aa16.99■□□□□ 0.31
TSC2-212ENST00000471143 SPATA31A5Q5VU36 1347 aa16.98■□□□□ 0.31
TSC2-212ENST00000471143 TTC21BQ7Z4L5 1316 aa16.98■□□□□ 0.31
TSC2-212ENST00000471143 SPATA31A7Q8IWB4 1347 aa16.98■□□□□ 0.31
TSC2-212ENST00000471143 PUS7Q96PZ0 661 aaKnown RBP16.98■□□□□ 0.31
TSC2-212ENST00000471143 TESK2Q96S53 571 aa16.98■□□□□ 0.31
TSC2-212ENST00000471143 GLI3P10071 1580 aa16.98■□□□□ 0.31
TSC2-212ENST00000471143 CLSPNQ9HAW4 1339 aa16.97■□□□□ 0.31
TSC2-212ENST00000471143 FAM98CQ17RN3 349 aaKnown RBP16.97■□□□□ 0.31
TSC2-212ENST00000471143 CPSF1Q10570 1443 aaKnown RBP16.96■□□□□ 0.31
TSC2-212ENST00000471143 CCDC125Q86Z20 511 aa16.96■□□□□ 0.31
TSC2-212ENST00000471143 SLC12A5Q9H2X9 1139 aa16.96■□□□□ 0.31
TSC2-212ENST00000471143 STRN4Q9NRL3 753 aa16.96■□□□□ 0.31
TSC2-212ENST00000471143 CPDO75976 1380 aa16.96■□□□□ 0.31
TSC2-212ENST00000471143 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.96■□□□□ 0.3
TSC2-212ENST00000471143 SLC24A1O60721 1099 aa16.95■□□□□ 0.3
TSC2-212ENST00000471143 EVA1CP58658 441 aa16.95■□□□□ 0.3
TSC2-212ENST00000471143 KRT27Q7Z3Y8 459 aa16.95■□□□□ 0.3
TSC2-212ENST00000471143 TMC1Q8TDI8 760 aa16.95■□□□□ 0.3
TSC2-212ENST00000471143 ABCA3Q99758 1704 aa16.95■□□□□ 0.3
TSC2-212ENST00000471143 SPATA31A1Q5TZJ5 1347 aa16.94■□□□□ 0.3
TSC2-212ENST00000471143 TTC21AQ8NDW8 1320 aa16.94■□□□□ 0.3
TSC2-212ENST00000471143 KTN1Q86UP2 1357 aaKnown RBP16.93■□□□□ 0.3
TSC2-212ENST00000471143 A0A0G2JS52 829 aa16.93■□□□□ 0.3
TSC2-212ENST00000471143 MYT1Q01538 1121 aa16.93■□□□□ 0.3
TSC2-212ENST00000471143 COL14A1Q05707 1796 aaKnown RBP16.92■□□□□ 0.3
TSC2-212ENST00000471143 LARP1Q6PKG0 1096 aaKnown RBP16.92■□□□□ 0.3
TSC2-212ENST00000471143 NWD2Q9ULI1 1742 aa16.92■□□□□ 0.3
TSC2-212ENST00000471143 CRYBG1Q9Y4K1 1723 aa16.91■□□□□ 0.3
TSC2-212ENST00000471143 HDGFL2Q7Z4V5 671 aaPredicted RBP16.91■□□□□ 0.3
TSC2-212ENST00000471143 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.91■□□□□ 0.3
TSC2-212ENST00000471143 PLCH1Q4KWH8 1693 aa16.91■□□□□ 0.3
TSC2-212ENST00000471143 ARHGEF25Q86VW2 580 aa16.9■□□□□ 0.3
TSC2-212ENST00000471143 KCNH5Q8NCM2 988 aa16.9■□□□□ 0.3
TSC2-212ENST00000471143 TERF2IPQ9NYB0 399 aa16.9■□□□□ 0.3
TSC2-212ENST00000471143 USP35Q9P2H5 1018 aa16.9■□□□□ 0.3
TSC2-212ENST00000471143 ZRANB1Q9UGI0 708 aa16.9■□□□□ 0.3
TSC2-212ENST00000471143 EP400Q96L91 3159 aa16.9■□□□□ 0.3
TSC2-212ENST00000471143 AATKQ6ZMQ8 1374 aa16.89■□□□□ 0.3
TSC2-212ENST00000471143 CAMTA1Q9Y6Y1 1673 aa16.89■□□□□ 0.29
TSC2-212ENST00000471143 ZBTB7CA1YPR0 619 aa16.89■□□□□ 0.29
TSC2-212ENST00000471143 AXIN2Q9Y2T1 843 aa16.89■□□□□ 0.29
TSC2-212ENST00000471143 CD163L1Q9NR16 1453 aa16.88■□□□□ 0.29
TSC2-212ENST00000471143 BARGINQ6ZT62 677 aa16.88■□□□□ 0.29
TSC2-212ENST00000471143 CCER1Q8TC90 406 aaPredicted RBP16.88■□□□□ 0.29
TSC2-212ENST00000471143 NME9Q86XW9 330 aa16.87■□□□□ 0.29
TSC2-212ENST00000471143 TCP11L2Q8N4U5 519 aa16.87■□□□□ 0.29
TSC2-212ENST00000471143 USP47Q96K76 1375 aa16.87■□□□□ 0.29
TSC2-212ENST00000471143 NRAPQ86VF7 1730 aa16.87■□□□□ 0.29
TSC2-212ENST00000471143 NRKQ7Z2Y5 1582 aa16.86■□□□□ 0.29
TSC2-212ENST00000471143 PHRF1Q9P1Y6 1649 aaKnown RBP16.86■□□□□ 0.29
TSC2-212ENST00000471143 SOX12O15370 315 aa16.86■□□□□ 0.29
TSC2-212ENST00000471143 TMF1P82094 1093 aa16.86■□□□□ 0.29
TSC2-212ENST00000471143 FAM182BQ5T319 152 aa16.86■□□□□ 0.29
TSC2-212ENST00000471143 USP31Q70CQ4 1352 aa16.86■□□□□ 0.29
TSC2-212ENST00000471143 BLMP54132 1417 aaPredicted RBP16.86■□□□□ 0.29
TSC2-212ENST00000471143 SLIT3O75094 1523 aa16.86■□□□□ 0.29
TSC2-212ENST00000471143 THRAP3Q9Y2W1 955 aaKnown RBP16.85■□□□□ 0.29
TSC2-212ENST00000471143 A0A1W2PP64 1363 aa16.84■□□□□ 0.29
TSC2-212ENST00000471143 SF3B2Q13435 895 aaKnown RBP16.83■□□□□ 0.28
TSC2-212ENST00000471143 EDC4Q6P2E9 1401 aaKnown RBP16.83■□□□□ 0.28
TSC2-212ENST00000471143 DEFB132Q7Z7B7 95 aa16.83■□□□□ 0.28
TSC2-212ENST00000471143 NINLQ9Y2I6 1382 aa16.83■□□□□ 0.28
TSC2-212ENST00000471143 COL5A2P05997 1499 aaPredicted RBP16.82■□□□□ 0.28
TSC2-212ENST00000471143 PIK3C2AO00443 1686 aa16.81■□□□□ 0.28
TSC2-212ENST00000471143 CDCA8Q53HL2 280 aa16.81■□□□□ 0.28
TSC2-212ENST00000471143 TOM1L2Q6ZVM7 507 aa16.81■□□□□ 0.28
TSC2-212ENST00000471143 LMO7Q8WWI1 1683 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms