RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 PRAM1Q96QH2 718 aa18.17■□□□□ 0.5
CCNL1-213ENST00000471044 PXDNQ92626 1479 aa18.17■□□□□ 0.5
CCNL1-213ENST00000471044 ADGRB2O60241 1585 aa18.17■□□□□ 0.5
CCNL1-213ENST00000471044 ARHGEF28Q8N1W1 1705 aaKnown RBP18.16■□□□□ 0.5
CCNL1-213ENST00000471044 NUTM2FA1L443 756 aa18.16■□□□□ 0.5
CCNL1-213ENST00000471044 RGS12O14924 1447 aa18.15■□□□□ 0.5
CCNL1-213ENST00000471044 PLCD3Q8N3E9 789 aa18.15■□□□□ 0.5
CCNL1-213ENST00000471044 TRAK1Q9UPV9 953 aa18.14■□□□□ 0.49
CCNL1-213ENST00000471044 USP32Q8NFA0 1604 aa18.13■□□□□ 0.49
CCNL1-213ENST00000471044 MARF1Q9Y4F3 1742 aaKnown RBP18.13■□□□□ 0.49
CCNL1-213ENST00000471044 FOXO3O43524 673 aa18.13■□□□□ 0.49
CCNL1-213ENST00000471044 C8orf37Q96NL8 207 aa18.13■□□□□ 0.49
CCNL1-213ENST00000471044 PHF12Q96QT6 1004 aa18.13■□□□□ 0.49
CCNL1-213ENST00000471044 POGKQ9P215 609 aa18.13■□□□□ 0.49
CCNL1-213ENST00000471044 SAFB2Q14151 953 aaKnown RBP eCLIP18.12■□□□□ 0.49
CCNL1-213ENST00000471044 QTRT2Q9H974 415 aaKnown RBP18.11■□□□□ 0.49
CCNL1-213ENST00000471044 POTEIP0CG38 1075 aa18.1■□□□□ 0.49
CCNL1-213ENST00000471044 RBM6P78332 1123 aaKnown RBP18.1■□□□□ 0.49
CCNL1-213ENST00000471044 ANKARQ7Z5J8 1434 aa18.09■□□□□ 0.49
CCNL1-213ENST00000471044 XPCQ01831 940 aaPredicted RBP18.08■□□□□ 0.48
CCNL1-213ENST00000471044 PHF8Q9UPP1 1060 aa18.08■□□□□ 0.48
CCNL1-213ENST00000471044 GALR2O43603 387 aaPredicted RBP18.07■□□□□ 0.48
CCNL1-213ENST00000471044 TSPYL2Q9H2G4 693 aaPredicted RBP18.07■□□□□ 0.48
CCNL1-213ENST00000471044 SPATA31A3Q5VYP0 1347 aa18.06■□□□□ 0.48
CCNL1-213ENST00000471044 ADAMTS2O95450 1211 aa18.06■□□□□ 0.48
CCNL1-213ENST00000471044 KRT28Q7Z3Y7 464 aa18.06■□□□□ 0.48
CCNL1-213ENST00000471044 TULP4Q9NRJ4 1543 aa18.06■□□□□ 0.48
CCNL1-213ENST00000471044 EP400Q96L91 3159 aa18.05■□□□□ 0.48
CCNL1-213ENST00000471044 EIF3AQ14152 1382 aaKnown RBP18.05■□□□□ 0.48
CCNL1-213ENST00000471044 MINK1Q8N4C8 1332 aaPredicted RBP18.05■□□□□ 0.48
CCNL1-213ENST00000471044 HIRIP3Q9BW71 556 aaPredicted RBP18.05■□□□□ 0.48
CCNL1-213ENST00000471044 ITSN1Q15811 1721 aa18.05■□□□□ 0.48
CCNL1-213ENST00000471044 NGLY1Q96IV0 654 aa18.04■□□□□ 0.48
CCNL1-213ENST00000471044 FBXO3Q9UK99 471 aa18.04■□□□□ 0.48
CCNL1-213ENST00000471044 ATAD2Q6PL18 1390 aa18.04■□□□□ 0.48
CCNL1-213ENST00000471044 WASLO00401 505 aaPredicted RBP18.03■□□□□ 0.48
CCNL1-213ENST00000471044 PSME1Q06323 249 aa18.03■□□□□ 0.48
CCNL1-213ENST00000471044 DCBLD2Q96PD2 775 aa18.03■□□□□ 0.48
CCNL1-213ENST00000471044 TRPM3Q9HCF6 1732 aaPredicted RBP18.03■□□□□ 0.48
CCNL1-213ENST00000471044 TNS3Q68CZ2 1445 aa18.02■□□□□ 0.48
CCNL1-213ENST00000471044 SBNO1A3KN83 1393 aa18.02■□□□□ 0.47
CCNL1-213ENST00000471044 PRR36Q9H6K5 1346 aa18.01■□□□□ 0.47
CCNL1-213ENST00000471044 ABCA3Q99758 1704 aa18.01■□□□□ 0.47
CCNL1-213ENST00000471044 NBPF1Q3BBV0 1214 aa18.01■□□□□ 0.47
CCNL1-213ENST00000471044 FNBP4Q8N3X1 1017 aaPredicted RBP18.01■□□□□ 0.47
CCNL1-213ENST00000471044 SIN3AQ96ST3 1273 aa18.01■□□□□ 0.47
CCNL1-213ENST00000471044 PMFBP1Q8TBY8 1022 aa18■□□□□ 0.47
CCNL1-213ENST00000471044 L3MBTL2Q969R5 705 aa18■□□□□ 0.47
CCNL1-213ENST00000471044 TRPM1Q7Z4N2 1603 aa18■□□□□ 0.47
CCNL1-213ENST00000471044 TNKS1BP1Q9C0C2 1729 aaKnown RBP18■□□□□ 0.47
CCNL1-213ENST00000471044 ALS2Q96Q42 1657 aa17.99■□□□□ 0.47
CCNL1-213ENST00000471044 RASEFQ8IZ41 740 aa17.98■□□□□ 0.47
CCNL1-213ENST00000471044 ZBTB47Q9UFB7 747 aaPredicted RBP17.98■□□□□ 0.47
CCNL1-213ENST00000471044 USP21Q9UK80 565 aa17.98■□□□□ 0.47
CCNL1-213ENST00000471044 CCDC61Q9Y6R9 512 aa17.98■□□□□ 0.47
CCNL1-213ENST00000471044 ATP7BP35670 1465 aa17.98■□□□□ 0.47
CCNL1-213ENST00000471044 TOPAZ1Q8N9V7 1692 aa17.98■□□□□ 0.47
CCNL1-213ENST00000471044 QRICH2Q9H0J4 1663 aa17.96■□□□□ 0.47
CCNL1-213ENST00000471044 ARHGEF10O15013 1369 aa17.96■□□□□ 0.47
CCNL1-213ENST00000471044 TRPC5Q9UL62 973 aaPredicted RBP17.96■□□□□ 0.47
CCNL1-213ENST00000471044 ATRNO75882 1429 aa17.96■□□□□ 0.47
CCNL1-213ENST00000471044 BCL9LQ86UU0 1499 aa17.95■□□□□ 0.46
CCNL1-213ENST00000471044 NEUROD1Q13562 356 aa17.95■□□□□ 0.46
CCNL1-213ENST00000471044 GPRASP1Q5JY77 1395 aa17.94■□□□□ 0.46
CCNL1-213ENST00000471044 NUDT16Q96DE0 195 aaKnown RBP17.94■□□□□ 0.46
CCNL1-213ENST00000471044 CDK19Q9BWU1 502 aa17.94■□□□□ 0.46
CCNL1-213ENST00000471044 CRYBG1Q9Y4K1 1723 aa17.94■□□□□ 0.46
CCNL1-213ENST00000471044 PLCH1Q4KWH8 1693 aa17.93■□□□□ 0.46
CCNL1-213ENST00000471044 SLIT2O94813 1529 aa17.93■□□□□ 0.46
CCNL1-213ENST00000471044 NWD2Q9ULI1 1742 aa17.93■□□□□ 0.46
CCNL1-213ENST00000471044 TRIM26Q12899 539 aaPredicted RBP17.93■□□□□ 0.46
CCNL1-213ENST00000471044 CENPJQ9HC77 1338 aaPredicted RBP17.93■□□□□ 0.46
CCNL1-213ENST00000471044 LMOD2Q6P5Q4 547 aa17.92■□□□□ 0.46
CCNL1-213ENST00000471044 NGDNQ8NEJ9 315 aaKnown RBP17.92■□□□□ 0.46
CCNL1-213ENST00000471044 CABLES1Q8TDN4 633 aa17.91■□□□□ 0.46
CCNL1-213ENST00000471044 HAP1P54257 671 aaPredicted RBP17.9■□□□□ 0.46
CCNL1-213ENST00000471044 NUBP1P53384 320 aa17.89■□□□□ 0.45
CCNL1-213ENST00000471044 MS4A3Q96HJ5 214 aa17.89■□□□□ 0.45
CCNL1-213ENST00000471044 POLR3AO14802 1390 aaPredicted RBP17.89■□□□□ 0.45
CCNL1-213ENST00000471044 PLEKHG3A1L390 1219 aa17.88■□□□□ 0.45
CCNL1-213ENST00000471044 UNC5CLQ8IV45 518 aa17.88■□□□□ 0.45
CCNL1-213ENST00000471044 ROCK2O75116 1388 aaKnown RBP17.87■□□□□ 0.45
CCNL1-213ENST00000471044 GLI3P10071 1580 aa17.87■□□□□ 0.45
CCNL1-213ENST00000471044 COL14A1Q05707 1796 aaKnown RBP17.86■□□□□ 0.45
CCNL1-213ENST00000471044 CCDC125Q86Z20 511 aa17.86■□□□□ 0.45
CCNL1-213ENST00000471044 GJD4Q96KN9 370 aaPredicted RBP17.86■□□□□ 0.45
CCNL1-213ENST00000471044 ACEP12821 1306 aa17.86■□□□□ 0.45
CCNL1-213ENST00000471044 PHRF1Q9P1Y6 1649 aaKnown RBP17.86■□□□□ 0.45
CCNL1-213ENST00000471044 NRAPQ86VF7 1730 aa17.86■□□□□ 0.45
CCNL1-213ENST00000471044 NBPF8Q3BBV2 869 aa17.85■□□□□ 0.45
CCNL1-213ENST00000471044 KIF12Q96FN5 646 aa17.85■□□□□ 0.45
CCNL1-213ENST00000471044 SRPK2P78362 688 aaKnown RBP17.84■□□□□ 0.45
CCNL1-213ENST00000471044 LHX8Q68G74 356 aa17.84■□□□□ 0.45
CCNL1-213ENST00000471044 BRWD3Q6RI45 1802 aa17.84■□□□□ 0.45
CCNL1-213ENST00000471044 RALGAPBQ86X10 1494 aa17.83■□□□□ 0.45
CCNL1-213ENST00000471044 PPIP5K1Q6PFW1 1433 aa17.83■□□□□ 0.45
CCNL1-213ENST00000471044 FAM83GA6ND36 823 aa17.82■□□□□ 0.44
CCNL1-213ENST00000471044 VASPP50552 380 aaPredicted RBP17.82■□□□□ 0.44
CCNL1-213ENST00000471044 CABP2Q9NPB3 220 aa17.82■□□□□ 0.44
CCNL1-213ENST00000471044 TONSLQ96HA7 1378 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms