RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 CCDC61Q9Y6R9 512 aa20.95■□□□□ 0.94
CDC42SE1-203ENST00000470278 PLCH1Q4KWH8 1693 aa20.95■□□□□ 0.94
CDC42SE1-203ENST00000470278 TMF1P82094 1093 aa20.94■□□□□ 0.94
CDC42SE1-203ENST00000470278 CABP2Q9NPB3 220 aa20.94■□□□□ 0.94
CDC42SE1-203ENST00000470278 USP21Q9UK80 565 aa20.94■□□□□ 0.94
CDC42SE1-203ENST00000470278 PPIP5K1Q6PFW1 1433 aa20.94■□□□□ 0.94
CDC42SE1-203ENST00000470278 SLIT2O94813 1529 aa20.94■□□□□ 0.94
CDC42SE1-203ENST00000470278 PHF8Q9UPP1 1060 aa20.93■□□□□ 0.94
CDC42SE1-203ENST00000470278 POLR3AO14802 1390 aaPredicted RBP20.93■□□□□ 0.94
CDC42SE1-203ENST00000470278 TRPM3Q9HCF6 1732 aaPredicted RBP20.92■□□□□ 0.94
CDC42SE1-203ENST00000470278 NINLQ9Y2I6 1382 aa20.91■□□□□ 0.94
CDC42SE1-203ENST00000470278 PLEKHG3A1L390 1219 aa20.9■□□□□ 0.94
CDC42SE1-203ENST00000470278 CDCA8Q53HL2 280 aa20.9■□□□□ 0.94
CDC42SE1-203ENST00000470278 TRPC5Q9UL62 973 aaPredicted RBP20.9■□□□□ 0.94
CDC42SE1-203ENST00000470278 CRYBG1Q9Y4K1 1723 aa20.9■□□□□ 0.94
CDC42SE1-203ENST00000470278 SPATA31A3Q5VYP0 1347 aa20.89■□□□□ 0.93
CDC42SE1-203ENST00000470278 AKAP12Q02952 1782 aa20.89■□□□□ 0.93
CDC42SE1-203ENST00000470278 NWD2Q9ULI1 1742 aa20.89■□□□□ 0.93
CDC42SE1-203ENST00000470278 MYOM1P52179 1685 aa20.89■□□□□ 0.93
CDC42SE1-203ENST00000470278 NRAPQ86VF7 1730 aa20.87■□□□□ 0.93
CDC42SE1-203ENST00000470278 ALS2Q96Q42 1657 aa20.87■□□□□ 0.93
CDC42SE1-203ENST00000470278 TNS3Q68CZ2 1445 aa20.87■□□□□ 0.93
CDC42SE1-203ENST00000470278 PMFBP1Q8TBY8 1022 aa20.86■□□□□ 0.93
CDC42SE1-203ENST00000470278 MON2Q7Z3U7 1717 aa20.86■□□□□ 0.93
CDC42SE1-203ENST00000470278 NRKQ7Z2Y5 1582 aa20.85■□□□□ 0.93
CDC42SE1-203ENST00000470278 CD163L1Q9NR16 1453 aa20.85■□□□□ 0.93
CDC42SE1-203ENST00000470278 CPSF1Q10570 1443 aaKnown RBP20.85■□□□□ 0.93
CDC42SE1-203ENST00000470278 ACEP12821 1306 aa20.84■□□□□ 0.93
CDC42SE1-203ENST00000470278 CABP1Q9NZU7 370 aa20.84■□□□□ 0.93
CDC42SE1-203ENST00000470278 SBNO1A3KN83 1393 aa20.84■□□□□ 0.93
CDC42SE1-203ENST00000470278 BRD4O60885 1362 aaPredicted RBP20.84■□□□□ 0.93
CDC42SE1-203ENST00000470278 NGDNQ8NEJ9 315 aaKnown RBP20.83■□□□□ 0.93
CDC42SE1-203ENST00000470278 USP6P35125 1406 aa20.82■□□□□ 0.92
CDC42SE1-203ENST00000470278 GJD4Q96KN9 370 aaPredicted RBP20.81■□□□□ 0.92
CDC42SE1-203ENST00000470278 PSME1Q06323 249 aa20.8■□□□□ 0.92
CDC42SE1-203ENST00000470278 KRT28Q7Z3Y7 464 aa20.8■□□□□ 0.92
CDC42SE1-203ENST00000470278 SSH2Q76I76 1423 aa20.79■□□□□ 0.92
CDC42SE1-203ENST00000470278 A0A1W2PP64 1363 aa20.78■□□□□ 0.92
CDC42SE1-203ENST00000470278 ANKRD36BQ8N2N9 1353 aa20.78■□□□□ 0.92
CDC42SE1-203ENST00000470278 CABLES1Q8TDN4 633 aa20.78■□□□□ 0.92
CDC42SE1-203ENST00000470278 ZNF692Q9BU19 519 aaPredicted RBP20.78■□□□□ 0.92
CDC42SE1-203ENST00000470278 ARHGEF10O15013 1369 aa20.77■□□□□ 0.92
CDC42SE1-203ENST00000470278 UNC5CLQ8IV45 518 aa20.77■□□□□ 0.92
CDC42SE1-203ENST00000470278 SLC12A5Q9H2X9 1139 aa20.77■□□□□ 0.92
CDC42SE1-203ENST00000470278 C11orf95C9JLR9 678 aaPredicted RBP20.76■□□□□ 0.91
CDC42SE1-203ENST00000470278 TMC1Q8TDI8 760 aa20.76■□□□□ 0.91
CDC42SE1-203ENST00000470278 TERF2IPQ9NYB0 399 aa20.76■□□□□ 0.91
CDC42SE1-203ENST00000470278 KTN1Q86UP2 1357 aaKnown RBP20.75■□□□□ 0.91
CDC42SE1-203ENST00000470278 EDC4Q6P2E9 1401 aaKnown RBP20.75■□□□□ 0.91
CDC42SE1-203ENST00000470278 KIF7Q2M1P5 1343 aa20.75■□□□□ 0.91
CDC42SE1-203ENST00000470278 PIK3C2AO00443 1686 aa20.74■□□□□ 0.91
CDC42SE1-203ENST00000470278 USP54Q70EL1 1684 aa20.74■□□□□ 0.91
CDC42SE1-203ENST00000470278 HDGFL2Q7Z4V5 671 aaPredicted RBP20.73■□□□□ 0.91
CDC42SE1-203ENST00000470278 CCDC7Q96M83 1385 aa20.72■□□□□ 0.91
CDC42SE1-203ENST00000470278 COL14A1Q05707 1796 aaKnown RBP20.72■□□□□ 0.91
CDC42SE1-203ENST00000470278 WASHC2AQ641Q2 1341 aa20.71■□□□□ 0.91
CDC42SE1-203ENST00000470278 TTC21AQ8NDW8 1320 aa20.71■□□□□ 0.91
CDC42SE1-203ENST00000470278 PHRF1Q9P1Y6 1649 aaKnown RBP20.71■□□□□ 0.91
CDC42SE1-203ENST00000470278 THSD7AQ9UPZ6 1657 aa20.7■□□□□ 0.9
CDC42SE1-203ENST00000470278 BLMP54132 1417 aaPredicted RBP20.7■□□□□ 0.9
CDC42SE1-203ENST00000470278 VPS72Q15906 364 aa20.69■□□□□ 0.9
CDC42SE1-203ENST00000470278 TTC21BQ7Z4L5 1316 aa20.69■□□□□ 0.9
CDC42SE1-203ENST00000470278 FAM83GA6ND36 823 aa20.67■□□□□ 0.9
CDC42SE1-203ENST00000470278 ONECUT3O60422 494 aaPredicted RBP20.67■□□□□ 0.9
CDC42SE1-203ENST00000470278 PAK3O75914 559 aaPredicted RBP20.67■□□□□ 0.9
CDC42SE1-203ENST00000470278 SLIT3O75094 1523 aa20.66■□□□□ 0.9
CDC42SE1-203ENST00000470278 TNS1Q9HBL0 1735 aaKnown RBP20.66■□□□□ 0.9
CDC42SE1-203ENST00000470278 KIF20BQ96Q89 1820 aa20.66■□□□□ 0.9
CDC42SE1-203ENST00000470278 PLEKHG5O94827 1062 aa20.65■□□□□ 0.9
CDC42SE1-203ENST00000470278 SEPT12Q8IYM1 358 aa20.65■□□□□ 0.9
CDC42SE1-203ENST00000470278 POLR3GLQ9BT43 218 aa20.65■□□□□ 0.9
CDC42SE1-203ENST00000470278 NSD3Q9BZ95 1437 aa20.64■□□□□ 0.89
CDC42SE1-203ENST00000470278 USP31Q70CQ4 1352 aa20.64■□□□□ 0.89
CDC42SE1-203ENST00000470278 USP19O94966 1318 aa20.64■□□□□ 0.89
CDC42SE1-203ENST00000470278 CCDC125Q86Z20 511 aa20.64■□□□□ 0.89
CDC42SE1-203ENST00000470278 DEFB132Q7Z7B7 95 aa20.63■□□□□ 0.89
CDC42SE1-203ENST00000470278 ABTB2Q8N961 1025 aa20.63■□□□□ 0.89
CDC42SE1-203ENST00000470278 OVOS2A0A0J9YW53 1432 aa20.62■□□□□ 0.89
CDC42SE1-203ENST00000470278 OVOS2Q6IE36 1432 aa20.62■□□□□ 0.89
CDC42SE1-203ENST00000470278 LMOD2Q6P5Q4 547 aa20.62■□□□□ 0.89
CDC42SE1-203ENST00000470278 LRP5O75197 1615 aa20.61■□□□□ 0.89
CDC42SE1-203ENST00000470278 CARD14Q9BXL6 1004 aa20.61■□□□□ 0.89
CDC42SE1-203ENST00000470278 RGPD1P0DJD0 1748 aa20.61■□□□□ 0.89
CDC42SE1-203ENST00000470278 NLRP13Q86W25 1043 aa20.6■□□□□ 0.89
CDC42SE1-203ENST00000470278 ANKRD26Q9UPS8 1709 aa20.59■□□□□ 0.89
CDC42SE1-203ENST00000470278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.59■□□□□ 0.89
CDC42SE1-203ENST00000470278 ZRANB1Q9UGI0 708 aa20.59■□□□□ 0.89
CDC42SE1-203ENST00000470278 PANK3Q9H999 370 aa20.58■□□□□ 0.89
CDC42SE1-203ENST00000470278 NFAT5O94916 1531 aa20.58■□□□□ 0.88
CDC42SE1-203ENST00000470278 LMO7Q8WWI1 1683 aa20.58■□□□□ 0.88
CDC42SE1-203ENST00000470278 NLRP6P59044 892 aa20.57■□□□□ 0.88
CDC42SE1-203ENST00000470278 NME9Q86XW9 330 aa20.57■□□□□ 0.88
CDC42SE1-203ENST00000470278 HAP1P54257 671 aaPredicted RBP20.56■□□□□ 0.88
CDC42SE1-203ENST00000470278 NUTM2GQ5VZR2 741 aa20.56■□□□□ 0.88
CDC42SE1-203ENST00000470278 NSD2O96028 1365 aa20.56■□□□□ 0.88
CDC42SE1-203ENST00000470278 CGNL1Q0VF96 1302 aa20.55■□□□□ 0.88
CDC42SE1-203ENST00000470278 KRT27Q7Z3Y8 459 aa20.55■□□□□ 0.88
CDC42SE1-203ENST00000470278 BTG4Q9NY30 223 aa20.55■□□□□ 0.88
CDC42SE1-203ENST00000470278 CPDO75976 1380 aa20.55■□□□□ 0.88
CDC42SE1-203ENST00000470278 FYB1O15117 783 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms