RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 TRPM3Q9HCF6 1732 aaPredicted RBP28.15■■■□□ 2.1
NCKIPSD-209ENST00000470006 TRIM37O94972 964 aa28.14■■■□□ 2.1
NCKIPSD-209ENST00000470006 NGDNQ8NEJ9 315 aaKnown RBP28.14■■■□□ 2.1
NCKIPSD-209ENST00000470006 MINK1Q8N4C8 1332 aaPredicted RBP28.13■■■□□ 2.09
NCKIPSD-209ENST00000470006 ACIN1Q9UKV3 1341 aaKnown RBP28.13■■■□□ 2.09
NCKIPSD-209ENST00000470006 TRAK1Q9UPV9 953 aa28.12■■■□□ 2.09
NCKIPSD-209ENST00000470006 ALS2Q96Q42 1657 aa28.12■■■□□ 2.09
NCKIPSD-209ENST00000470006 TNS1Q9HBL0 1735 aaKnown RBP28.11■■■□□ 2.09
NCKIPSD-209ENST00000470006 ADGRB2O60241 1585 aa28.11■■■□□ 2.09
NCKIPSD-209ENST00000470006 DISP2A7MBM2 1401 aa28.1■■■□□ 2.09
NCKIPSD-209ENST00000470006 APBA3O96018 575 aa28.1■■■□□ 2.09
NCKIPSD-209ENST00000470006 FAM196AQ6ZSG2 479 aa28.1■■■□□ 2.09
NCKIPSD-209ENST00000470006 STRN4Q9NRL3 753 aa28.1■■■□□ 2.09
NCKIPSD-209ENST00000470006 EIF3AQ14152 1382 aaKnown RBP28.09■■■□□ 2.09
NCKIPSD-209ENST00000470006 DLC1Q96QB1 1528 aa28.08■■■□□ 2.09
NCKIPSD-209ENST00000470006 THSD7AQ9UPZ6 1657 aa28.08■■■□□ 2.09
NCKIPSD-209ENST00000470006 CAMKK2Q96RR4 588 aa28.08■■■□□ 2.09
NCKIPSD-209ENST00000470006 CHRNA2Q15822 529 aa28.06■■■□□ 2.08
NCKIPSD-209ENST00000470006 USP35Q9P2H5 1018 aa28.06■■■□□ 2.08
NCKIPSD-209ENST00000470006 SPATA31A1Q5TZJ5 1347 aa28.06■■■□□ 2.08
NCKIPSD-209ENST00000470006 PRR36Q9H6K5 1346 aa28.06■■■□□ 2.08
NCKIPSD-209ENST00000470006 YY1P25490 414 aa28.05■■■□□ 2.08
NCKIPSD-209ENST00000470006 WASLO00401 505 aaPredicted RBP28.04■■■□□ 2.08
NCKIPSD-209ENST00000470006 KIAA0232Q92628 1395 aa28.03■■■□□ 2.08
NCKIPSD-209ENST00000470006 EVA1CP58658 441 aa28.03■■■□□ 2.08
NCKIPSD-209ENST00000470006 PDE3BQ13370 1112 aa28.03■■■□□ 2.08
NCKIPSD-209ENST00000470006 NBPF8Q3BBV2 869 aa28.02■■■□□ 2.08
NCKIPSD-209ENST00000470006 NBPF14Q5TI25 921 aa28.02■■■□□ 2.08
NCKIPSD-209ENST00000470006 TULP4Q9NRJ4 1543 aa28.02■■■□□ 2.08
NCKIPSD-209ENST00000470006 ZC3H6P61129 1189 aaKnown RBP28.01■■■□□ 2.07
NCKIPSD-209ENST00000470006 NUTM2GQ5VZR2 741 aa28■■■□□ 2.07
NCKIPSD-209ENST00000470006 CRYBG1Q9Y4K1 1723 aa28■■■□□ 2.07
NCKIPSD-209ENST00000470006 PARD3Q8TEW0 1356 aa27.99■■■□□ 2.07
NCKIPSD-209ENST00000470006 PPP1R1BQ9UD71 204 aaPredicted RBP27.99■■■□□ 2.07
NCKIPSD-209ENST00000470006 KDM2AQ9Y2K7 1162 aa27.99■■■□□ 2.07
NCKIPSD-209ENST00000470006 DCAF8L1A6NGE4 600 aa27.97■■■□□ 2.07
NCKIPSD-209ENST00000470006 ADGRB1O14514 1584 aa27.95■■■□□ 2.07
NCKIPSD-209ENST00000470006 NUDT16Q96DE0 195 aaKnown RBP27.93■■■□□ 2.06
NCKIPSD-209ENST00000470006 BARGINQ6ZT62 677 aa27.91■■■□□ 2.06
NCKIPSD-209ENST00000470006 SPON1Q9HCB6 807 aa27.91■■■□□ 2.06
NCKIPSD-209ENST00000470006 ITSN1Q15811 1721 aa27.91■■■□□ 2.06
NCKIPSD-209ENST00000470006 PHRF1Q9P1Y6 1649 aaKnown RBP27.91■■■□□ 2.06
NCKIPSD-209ENST00000470006 DCAF11Q8TEB1 546 aa27.9■■■□□ 2.06
NCKIPSD-209ENST00000470006 RREB1Q92766 1687 aa27.9■■■□□ 2.06
NCKIPSD-209ENST00000470006 NUP188Q5SRE5 1749 aa27.89■■■□□ 2.05
NCKIPSD-209ENST00000470006 LARP1Q6PKG0 1096 aaKnown RBP27.88■■■□□ 2.05
NCKIPSD-209ENST00000470006 SSH2Q76I76 1423 aa27.88■■■□□ 2.05
NCKIPSD-209ENST00000470006 TCP11L2Q8N4U5 519 aa27.88■■■□□ 2.05
NCKIPSD-209ENST00000470006 ATP7BP35670 1465 aa27.87■■■□□ 2.05
NCKIPSD-209ENST00000470006 KCNQ2O43526 872 aa27.86■■■□□ 2.05
NCKIPSD-209ENST00000470006 ABTB2Q8N961 1025 aa27.85■■■□□ 2.05
NCKIPSD-209ENST00000470006 CDK19Q9BWU1 502 aa27.84■■■□□ 2.05
NCKIPSD-209ENST00000470006 ACEP12821 1306 aa27.83■■■□□ 2.05
NCKIPSD-209ENST00000470006 THRAP3Q9Y2W1 955 aaKnown RBP27.8■■■□□ 2.04
NCKIPSD-209ENST00000470006 CAMTA1Q9Y6Y1 1673 aa27.8■■■□□ 2.04
NCKIPSD-209ENST00000470006 ZBTB7CA1YPR0 619 aa27.79■■■□□ 2.04
NCKIPSD-209ENST00000470006 NINLQ9Y2I6 1382 aa27.78■■■□□ 2.04
NCKIPSD-209ENST00000470006 ARHGEF28Q8N1W1 1705 aaKnown RBP27.78■■■□□ 2.04
NCKIPSD-209ENST00000470006 CCDC61Q9Y6R9 512 aa27.77■■■□□ 2.04
NCKIPSD-209ENST00000470006 C11orf95C9JLR9 678 aaPredicted RBP27.76■■■□□ 2.03
NCKIPSD-209ENST00000470006 NRKQ7Z2Y5 1582 aa27.76■■■□□ 2.03
NCKIPSD-209ENST00000470006 POLR3AO14802 1390 aaPredicted RBP27.75■■■□□ 2.03
NCKIPSD-209ENST00000470006 STAC3Q96MF2 364 aa27.75■■■□□ 2.03
NCKIPSD-209ENST00000470006 NLRP13Q86W25 1043 aa27.74■■■□□ 2.03
NCKIPSD-209ENST00000470006 CPDO75976 1380 aa27.73■■■□□ 2.03
NCKIPSD-209ENST00000470006 GCP02774 474 aa27.72■■■□□ 2.03
NCKIPSD-209ENST00000470006 PLEKHG3A1L390 1219 aa27.71■■■□□ 2.03
NCKIPSD-209ENST00000470006 PARP4Q9UKK3 1724 aaKnown RBP27.71■■■□□ 2.03
NCKIPSD-209ENST00000470006 LMO7Q8WWI1 1683 aa27.71■■■□□ 2.03
NCKIPSD-209ENST00000470006 RAB3GAP2Q9H2M9 1393 aa27.71■■■□□ 2.03
NCKIPSD-209ENST00000470006 OVOS2A0A0G2JMS6 1433 aa27.7■■■□□ 2.03
NCKIPSD-209ENST00000470006 OVOS2A0A0J9YW53 1432 aa27.7■■■□□ 2.03
NCKIPSD-209ENST00000470006 OVOS2Q6IE36 1432 aa27.7■■■□□ 2.03
NCKIPSD-209ENST00000470006 USP19O94966 1318 aa27.69■■■□□ 2.02
NCKIPSD-209ENST00000470006 TOPAZ1Q8N9V7 1692 aa27.69■■■□□ 2.02
NCKIPSD-209ENST00000470006 BCL11BQ9C0K0 894 aaPredicted RBP27.69■■■□□ 2.02
NCKIPSD-209ENST00000470006 DDB1Q16531 1140 aa27.68■■■□□ 2.02
NCKIPSD-209ENST00000470006 COL5A2P05997 1499 aaPredicted RBP27.68■■■□□ 2.02
NCKIPSD-209ENST00000470006 CRB1P82279 1406 aa27.67■■■□□ 2.02
NCKIPSD-209ENST00000470006 PLSCR1O15162 318 aa27.67■■■□□ 2.02
NCKIPSD-209ENST00000470006 SRPK2P78362 688 aaKnown RBP27.67■■■□□ 2.02
NCKIPSD-209ENST00000470006 ANO8Q9HCE9 1232 aaPredicted RBP27.66■■■□□ 2.02
NCKIPSD-209ENST00000470006 ZBTB7AO95365 584 aa27.65■■■□□ 2.02
NCKIPSD-209ENST00000470006 TOM1L2Q6ZVM7 507 aa27.65■■■□□ 2.02
NCKIPSD-209ENST00000470006 SBF2Q86WG5 1849 aa27.64■■■□□ 2.01
NCKIPSD-209ENST00000470006 PPIP5K1Q6PFW1 1433 aa27.62■■■□□ 2.01
NCKIPSD-209ENST00000470006 PDGFDQ9GZP0 370 aaPredicted RBP27.62■■■□□ 2.01
NCKIPSD-209ENST00000470006 RGPD3A6NKT7 1758 aaPredicted RBP27.61■■■□□ 2.01
NCKIPSD-209ENST00000470006 RGPD4Q7Z3J3 1758 aa27.61■■■□□ 2.01
NCKIPSD-209ENST00000470006 NLRP6P59044 892 aa27.61■■■□□ 2.01
NCKIPSD-209ENST00000470006 PTF1AQ7RTS3 328 aa27.61■■■□□ 2.01
NCKIPSD-209ENST00000470006 ATF5Q9Y2D1 282 aaPredicted RBP27.61■■■□□ 2.01
NCKIPSD-209ENST00000470006 PEAK1Q9H792 1746 aa27.61■■■□□ 2.01
NCKIPSD-209ENST00000470006 CABP2Q9NPB3 220 aa27.59■■■□□ 2.01
NCKIPSD-209ENST00000470006 LRRC37A3O60309 1634 aa27.59■■■□□ 2.01
NCKIPSD-209ENST00000470006 CASZ1Q86V15 1759 aa27.58■■■□□ 2.01
NCKIPSD-209ENST00000470006 STK32BQ9NY57 414 aa27.58■■■□□ 2.01
NCKIPSD-209ENST00000470006 ZNF784Q8NCA9 323 aaPredicted RBP27.56■■■□□ 2
NCKIPSD-209ENST00000470006 AATKQ6ZMQ8 1374 aa27.56■■■□□ 2
NCKIPSD-209ENST00000470006 PROM2Q8N271 834 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms