RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 PMFBP1Q8TBY8 1022 aa11.71□□□□□ -0.53
TRAPPC3-206ENST00000469757 CABP2Q9NPB3 220 aa11.71□□□□□ -0.53
TRAPPC3-206ENST00000469757 NWD2Q9ULI1 1742 aa11.71□□□□□ -0.54
TRAPPC3-206ENST00000469757 NGDNQ8NEJ9 315 aaKnown RBP11.69□□□□□ -0.54
TRAPPC3-206ENST00000469757 NRAPQ86VF7 1730 aa11.69□□□□□ -0.54
TRAPPC3-206ENST00000469757 USP19O94966 1318 aa11.68□□□□□ -0.54
TRAPPC3-206ENST00000469757 COL14A1Q05707 1796 aaKnown RBP11.68□□□□□ -0.54
TRAPPC3-206ENST00000469757 LMO7Q8WWI1 1683 aa11.68□□□□□ -0.54
TRAPPC3-206ENST00000469757 EDC4Q6P2E9 1401 aaKnown RBP11.68□□□□□ -0.54
TRAPPC3-206ENST00000469757 A0A1W2PP64 1363 aa11.67□□□□□ -0.54
TRAPPC3-206ENST00000469757 SLIT2O94813 1529 aa11.67□□□□□ -0.54
TRAPPC3-206ENST00000469757 ABCC6O95255 1503 aa11.67□□□□□ -0.54
TRAPPC3-206ENST00000469757 CABP1Q9NZU7 370 aa11.67□□□□□ -0.54
TRAPPC3-206ENST00000469757 ANKRD36BQ8N2N9 1353 aa11.67□□□□□ -0.54
TRAPPC3-206ENST00000469757 NFAT5O94916 1531 aa11.66□□□□□ -0.54
TRAPPC3-206ENST00000469757 EIF4G2P78344 907 aaKnown RBP eCLIP11.66□□□□□ -0.54
TRAPPC3-206ENST00000469757 TMF1P82094 1093 aa11.66□□□□□ -0.54
TRAPPC3-206ENST00000469757 TTC21AQ8NDW8 1320 aa11.65□□□□□ -0.54
TRAPPC3-206ENST00000469757 RGS17Q9UGC6 210 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC3-206ENST00000469757 KTN1Q86UP2 1357 aaKnown RBP11.65□□□□□ -0.55
TRAPPC3-206ENST00000469757 CDK12Q9NYV4 1490 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC3-206ENST00000469757 OVOS2A0A0J9YW53 1432 aa11.64□□□□□ -0.55
TRAPPC3-206ENST00000469757 OVOS2Q6IE36 1432 aa11.64□□□□□ -0.55
TRAPPC3-206ENST00000469757 CDCA8Q53HL2 280 aa11.64□□□□□ -0.55
TRAPPC3-206ENST00000469757 ZNF692Q9BU19 519 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC3-206ENST00000469757 KIF20BQ96Q89 1820 aa11.64□□□□□ -0.55
TRAPPC3-206ENST00000469757 CPDO75976 1380 aa11.64□□□□□ -0.55
TRAPPC3-206ENST00000469757 BCL9LQ86UU0 1499 aa11.63□□□□□ -0.55
TRAPPC3-206ENST00000469757 HSPA5P11021 654 aaKnown RBP11.63□□□□□ -0.55
TRAPPC3-206ENST00000469757 USP31Q70CQ4 1352 aa11.63□□□□□ -0.55
TRAPPC3-206ENST00000469757 ATRNO75882 1429 aa11.62□□□□□ -0.55
TRAPPC3-206ENST00000469757 FNBP4Q8N3X1 1017 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC3-206ENST00000469757 TTC21BQ7Z4L5 1316 aa11.61□□□□□ -0.55
TRAPPC3-206ENST00000469757 ANKRD26Q9UPS8 1709 aa11.61□□□□□ -0.55
TRAPPC3-206ENST00000469757 NUTM2BA6NNL0 878 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC3-206ENST00000469757 NUTM2EB1AL46 878 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC3-206ENST00000469757 MEX3CQ5U5Q3 659 aaKnown RBP11.61□□□□□ -0.55
TRAPPC3-206ENST00000469757 NUTM2AQ8IVF1 878 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC3-206ENST00000469757 PHF23Q9BUL5 403 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC3-206ENST00000469757 TERF2IPQ9NYB0 399 aa11.61□□□□□ -0.55
TRAPPC3-206ENST00000469757 COL18A1P39060 1754 aa11.61□□□□□ -0.55
TRAPPC3-206ENST00000469757 AFF2P51816 1311 aa11.6□□□□□ -0.55
TRAPPC3-206ENST00000469757 ZNF772Q68DY9 489 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC3-206ENST00000469757 SLC12A5Q9H2X9 1139 aa11.6□□□□□ -0.55
TRAPPC3-206ENST00000469757 GLI3P10071 1580 aa11.59□□□□□ -0.55
TRAPPC3-206ENST00000469757 PAK3O75914 559 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC3-206ENST00000469757 HDGFL2Q7Z4V5 671 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC3-206ENST00000469757 CABLES1Q8TDN4 633 aa11.59□□□□□ -0.55
TRAPPC3-206ENST00000469757 C8orf37Q96NL8 207 aa11.59□□□□□ -0.55
TRAPPC3-206ENST00000469757 KIAA0232Q92628 1395 aa11.58□□□□□ -0.56
TRAPPC3-206ENST00000469757 ADAMTS2O95450 1211 aa11.58□□□□□ -0.56
TRAPPC3-206ENST00000469757 ABTB2Q8N961 1025 aa11.58□□□□□ -0.56
TRAPPC3-206ENST00000469757 LTN1O94822 1766 aa11.58□□□□□ -0.56
TRAPPC3-206ENST00000469757 LMOD2Q6P5Q4 547 aa11.57□□□□□ -0.56
TRAPPC3-206ENST00000469757 POTEAQ6S8J7 498 aa11.57□□□□□ -0.56
TRAPPC3-206ENST00000469757 NLRP13Q86W25 1043 aa11.57□□□□□ -0.56
TRAPPC3-206ENST00000469757 TMC1Q8TDI8 760 aa11.57□□□□□ -0.56
TRAPPC3-206ENST00000469757 NSD3Q9BZ95 1437 aa11.57□□□□□ -0.56
TRAPPC3-206ENST00000469757 THSD7AQ9UPZ6 1657 aa11.56□□□□□ -0.56
TRAPPC3-206ENST00000469757 CAMTA1Q9Y6Y1 1673 aa11.56□□□□□ -0.56
TRAPPC3-206ENST00000469757 RGS12O14924 1447 aa11.56□□□□□ -0.56
TRAPPC3-206ENST00000469757 COL5A2P05997 1499 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC3-206ENST00000469757 WNK3Q9BYP7 1800 aa11.56□□□□□ -0.56
TRAPPC3-206ENST00000469757 FAM208AQ9UK61 1670 aaKnown RBP11.55□□□□□ -0.56
TRAPPC3-206ENST00000469757 AATKQ6ZMQ8 1374 aa11.55□□□□□ -0.56
TRAPPC3-206ENST00000469757 NGLY1Q96IV0 654 aa11.55□□□□□ -0.56
TRAPPC3-206ENST00000469757 KIF7Q2M1P5 1343 aa11.55□□□□□ -0.56
TRAPPC3-206ENST00000469757 GCP02774 474 aa11.54□□□□□ -0.56
TRAPPC3-206ENST00000469757 HAP1P54257 671 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC3-206ENST00000469757 NLRP6P59044 892 aa11.54□□□□□ -0.56
TRAPPC3-206ENST00000469757 ILDR2Q71H61 639 aa11.54□□□□□ -0.56
TRAPPC3-206ENST00000469757 NME9Q86XW9 330 aa11.54□□□□□ -0.56
TRAPPC3-206ENST00000469757 UNC5CLQ8IV45 518 aa11.54□□□□□ -0.56
TRAPPC3-206ENST00000469757 PRDM11Q9NQV5 511 aa11.54□□□□□ -0.56
TRAPPC3-206ENST00000469757 USP21Q9UK80 565 aa11.54□□□□□ -0.56
TRAPPC3-206ENST00000469757 CCDC7Q96M83 1385 aa11.54□□□□□ -0.56
TRAPPC3-206ENST00000469757 FAM83GA6ND36 823 aa11.53□□□□□ -0.56
TRAPPC3-206ENST00000469757 C11orf95C9JLR9 678 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC3-206ENST00000469757 NUTM2GQ5VZR2 741 aa11.53□□□□□ -0.56
TRAPPC3-206ENST00000469757 KCNH5Q8NCM2 988 aa11.53□□□□□ -0.56
TRAPPC3-206ENST00000469757 TRPC5Q9UL62 973 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC3-206ENST00000469757 NSD2O96028 1365 aa11.53□□□□□ -0.56
TRAPPC3-206ENST00000469757 VPS72Q15906 364 aa11.52□□□□□ -0.57
TRAPPC3-206ENST00000469757 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRAPPC3-206ENST00000469757 CARD14Q9BXL6 1004 aa11.52□□□□□ -0.57
TRAPPC3-206ENST00000469757 RTL1A6NKG5 1358 aa11.52□□□□□ -0.57
TRAPPC3-206ENST00000469757 BLMP54132 1417 aaPredicted RBP11.52□□□□□ -0.57
TRAPPC3-206ENST00000469757 RBM6P78332 1123 aaKnown RBP11.51□□□□□ -0.57
TRAPPC3-206ENST00000469757 ARHGEF25Q86VW2 580 aa11.51□□□□□ -0.57
TRAPPC3-206ENST00000469757 PEAK1Q9H792 1746 aa11.51□□□□□ -0.57
TRAPPC3-206ENST00000469757 PARP4Q9UKK3 1724 aaKnown RBP11.51□□□□□ -0.57
TRAPPC3-206ENST00000469757 SMG6Q86US8 1419 aaKnown RBP11.51□□□□□ -0.57
TRAPPC3-206ENST00000469757 RGPD5Q99666 1765 aa11.5□□□□□ -0.57
TRAPPC3-206ENST00000469757 WASHC2AQ641Q2 1341 aa11.5□□□□□ -0.57
TRAPPC3-206ENST00000469757 KIF24Q5T7B8 1368 aa11.5□□□□□ -0.57
TRAPPC3-206ENST00000469757 FYB1O15117 783 aa11.49□□□□□ -0.57
TRAPPC3-206ENST00000469757 RXRBP28702 533 aa11.49□□□□□ -0.57
TRAPPC3-206ENST00000469757 QTRT2Q9H974 415 aaKnown RBP11.49□□□□□ -0.57
TRAPPC3-206ENST00000469757 BTG4Q9NY30 223 aa11.49□□□□□ -0.57
TRAPPC3-206ENST00000469757 ZRANB1Q9UGI0 708 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms