RNA–Protein interactions for RNA: ENST00000469672.5

ABCD4-205, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-205ENST00000469672 ITSN1Q15811 1721 aa18.55■□□□□ 0.56
ABCD4-205ENST00000469672 SRPK2P78362 688 aaKnown RBP18.55■□□□□ 0.56
ABCD4-205ENST00000469672 CCDC125Q86Z20 511 aa18.54■□□□□ 0.56
ABCD4-205ENST00000469672 GLI3P10071 1580 aa18.53■□□□□ 0.56
ABCD4-205ENST00000469672 ABCA3Q99758 1704 aa18.53■□□□□ 0.56
ABCD4-205ENST00000469672 CABP2Q9NPB3 220 aa18.53■□□□□ 0.56
ABCD4-205ENST00000469672 BTG4Q9NY30 223 aa18.53■□□□□ 0.56
ABCD4-205ENST00000469672 NWD2Q9ULI1 1742 aa18.53■□□□□ 0.56
ABCD4-205ENST00000469672 CCDC9Q9Y3X0 531 aaKnown RBP18.52■□□□□ 0.56
ABCD4-205ENST00000469672 SEPT12Q8IYM1 358 aa18.51■□□□□ 0.55
ABCD4-205ENST00000469672 ROCK2O75116 1388 aaKnown RBP18.5■□□□□ 0.55
ABCD4-205ENST00000469672 TOPAZ1Q8N9V7 1692 aa18.5■□□□□ 0.55
ABCD4-205ENST00000469672 TRIM26Q12899 539 aaPredicted RBP18.49■□□□□ 0.55
ABCD4-205ENST00000469672 ABTB2Q8N961 1025 aa18.49■□□□□ 0.55
ABCD4-205ENST00000469672 PRDM11Q9NQV5 511 aa18.49■□□□□ 0.55
ABCD4-205ENST00000469672 BRD4O60885 1362 aaPredicted RBP18.49■□□□□ 0.55
ABCD4-205ENST00000469672 PLCH1Q4KWH8 1693 aa18.49■□□□□ 0.55
ABCD4-205ENST00000469672 PPIP5K1Q6PFW1 1433 aa18.49■□□□□ 0.55
ABCD4-205ENST00000469672 EVC2Q86UK5 1308 aa18.49■□□□□ 0.55
ABCD4-205ENST00000469672 CABP1Q9NZU7 370 aa18.48■□□□□ 0.55
ABCD4-205ENST00000469672 TRPM1Q7Z4N2 1603 aa18.48■□□□□ 0.55
ABCD4-205ENST00000469672 NUTM2GQ5VZR2 741 aa18.47■□□□□ 0.55
ABCD4-205ENST00000469672 COL14A1Q05707 1796 aaKnown RBP18.47■□□□□ 0.55
ABCD4-205ENST00000469672 KIAA0232Q92628 1395 aa18.46■□□□□ 0.55
ABCD4-205ENST00000469672 EP400Q96L91 3159 aa18.46■□□□□ 0.55
ABCD4-205ENST00000469672 NLRP13Q86W25 1043 aa18.46■□□□□ 0.55
ABCD4-205ENST00000469672 CRYBG1Q9Y4K1 1723 aa18.46■□□□□ 0.55
ABCD4-205ENST00000469672 QRICH2Q9H0J4 1663 aa18.45■□□□□ 0.54
ABCD4-205ENST00000469672 ZC3H6P61129 1189 aaKnown RBP18.45■□□□□ 0.54
ABCD4-205ENST00000469672 SPATA31A5Q5VU36 1347 aa18.45■□□□□ 0.54
ABCD4-205ENST00000469672 SPATA31A7Q8IWB4 1347 aa18.45■□□□□ 0.54
ABCD4-205ENST00000469672 KRT27Q7Z3Y8 459 aa18.44■□□□□ 0.54
ABCD4-205ENST00000469672 USP19O94966 1318 aa18.44■□□□□ 0.54
ABCD4-205ENST00000469672 CHRNA2Q15822 529 aa18.43■□□□□ 0.54
ABCD4-205ENST00000469672 FAM98CQ17RN3 349 aaKnown RBP18.43■□□□□ 0.54
ABCD4-205ENST00000469672 ZNF692Q9BU19 519 aaPredicted RBP18.43■□□□□ 0.54
ABCD4-205ENST00000469672 NRAPQ86VF7 1730 aa18.43■□□□□ 0.54
ABCD4-205ENST00000469672 GCP02774 474 aa18.42■□□□□ 0.54
ABCD4-205ENST00000469672 TONSLQ96HA7 1378 aa18.42■□□□□ 0.54
ABCD4-205ENST00000469672 USP6P35125 1406 aa18.41■□□□□ 0.54
ABCD4-205ENST00000469672 CARD11Q9BXL7 1154 aa18.41■□□□□ 0.54
ABCD4-205ENST00000469672 CPDO75976 1380 aa18.41■□□□□ 0.54
ABCD4-205ENST00000469672 BLMP54132 1417 aaPredicted RBP18.4■□□□□ 0.54
ABCD4-205ENST00000469672 SBNO2Q9Y2G9 1366 aa18.4■□□□□ 0.54
ABCD4-205ENST00000469672 SSH2Q76I76 1423 aa18.4■□□□□ 0.54
ABCD4-205ENST00000469672 BRWD3Q6RI45 1802 aa18.39■□□□□ 0.54
ABCD4-205ENST00000469672 A0A0G2JS52 829 aa18.39■□□□□ 0.53
ABCD4-205ENST00000469672 NLRP6P59044 892 aa18.39■□□□□ 0.53
ABCD4-205ENST00000469672 MYT1Q01538 1121 aa18.39■□□□□ 0.53
ABCD4-205ENST00000469672 SPATA31A1Q5TZJ5 1347 aa18.39■□□□□ 0.53
ABCD4-205ENST00000469672 PHRF1Q9P1Y6 1649 aaKnown RBP18.38■□□□□ 0.53
ABCD4-205ENST00000469672 EVA1CP58658 441 aa18.38■□□□□ 0.53
ABCD4-205ENST00000469672 STRN4Q9NRL3 753 aa18.38■□□□□ 0.53
ABCD4-205ENST00000469672 SF3B2Q13435 895 aaKnown RBP18.36■□□□□ 0.53
ABCD4-205ENST00000469672 ZRANB1Q9UGI0 708 aa18.36■□□□□ 0.53
ABCD4-205ENST00000469672 BARGINQ6ZT62 677 aa18.35■□□□□ 0.53
ABCD4-205ENST00000469672 NRKQ7Z2Y5 1582 aa18.34■□□□□ 0.53
ABCD4-205ENST00000469672 CPSF1Q10570 1443 aaKnown RBP18.34■□□□□ 0.53
ABCD4-205ENST00000469672 TTC21BQ7Z4L5 1316 aa18.34■□□□□ 0.53
ABCD4-205ENST00000469672 CAMTA1Q9Y6Y1 1673 aa18.34■□□□□ 0.53
ABCD4-205ENST00000469672 TTC21AQ8NDW8 1320 aa18.33■□□□□ 0.53
ABCD4-205ENST00000469672 LARP1Q6PKG0 1096 aaKnown RBP18.33■□□□□ 0.52
ABCD4-205ENST00000469672 PUS7Q96PZ0 661 aaKnown RBP18.33■□□□□ 0.52
ABCD4-205ENST00000469672 DEFB132Q7Z7B7 95 aa18.32■□□□□ 0.52
ABCD4-205ENST00000469672 THRAP3Q9Y2W1 955 aaKnown RBP18.32■□□□□ 0.52
ABCD4-205ENST00000469672 AATKQ6ZMQ8 1374 aa18.31■□□□□ 0.52
ABCD4-205ENST00000469672 TCP11L2Q8N4U5 519 aa18.31■□□□□ 0.52
ABCD4-205ENST00000469672 KCNH5Q8NCM2 988 aa18.31■□□□□ 0.52
ABCD4-205ENST00000469672 USP35Q9P2H5 1018 aa18.31■□□□□ 0.52
ABCD4-205ENST00000469672 KTN1Q86UP2 1357 aaKnown RBP18.3■□□□□ 0.52
ABCD4-205ENST00000469672 SLIT3O75094 1523 aa18.3■□□□□ 0.52
ABCD4-205ENST00000469672 SLC24A1O60721 1099 aa18.3■□□□□ 0.52
ABCD4-205ENST00000469672 LMO7Q8WWI1 1683 aa18.3■□□□□ 0.52
ABCD4-205ENST00000469672 THSD7AQ9UPZ6 1657 aa18.3■□□□□ 0.52
ABCD4-205ENST00000469672 BAG6P46379 1132 aa18.28■□□□□ 0.52
ABCD4-205ENST00000469672 FAM182BQ5T319 152 aa18.28■□□□□ 0.52
ABCD4-205ENST00000469672 FAM196AQ6ZSG2 479 aa18.28■□□□□ 0.52
ABCD4-205ENST00000469672 ARHGEF25Q86VW2 580 aa18.28■□□□□ 0.52
ABCD4-205ENST00000469672 COL5A2P05997 1499 aaPredicted RBP18.27■□□□□ 0.52
ABCD4-205ENST00000469672 PIK3C2AO00443 1686 aa18.26■□□□□ 0.51
ABCD4-205ENST00000469672 PDE3BQ13370 1112 aa18.26■□□□□ 0.51
ABCD4-205ENST00000469672 TMC1Q8TDI8 760 aa18.26■□□□□ 0.51
ABCD4-205ENST00000469672 TESK2Q96S53 571 aa18.26■□□□□ 0.51
ABCD4-205ENST00000469672 SLC12A5Q9H2X9 1139 aa18.26■□□□□ 0.51
ABCD4-205ENST00000469672 AKAP12Q02952 1782 aa18.26■□□□□ 0.51
ABCD4-205ENST00000469672 ST20-MTHFSA0A0A6YYL1 179 aa18.25■□□□□ 0.51
ABCD4-205ENST00000469672 ZBTB7CA1YPR0 619 aa18.25■□□□□ 0.51
ABCD4-205ENST00000469672 HDGFL2Q7Z4V5 671 aaPredicted RBP18.25■□□□□ 0.51
ABCD4-205ENST00000469672 AXIN2Q9Y2T1 843 aa18.25■□□□□ 0.51
ABCD4-205ENST00000469672 CRB1P82279 1406 aa18.24■□□□□ 0.51
ABCD4-205ENST00000469672 TERF2IPQ9NYB0 399 aa18.24■□□□□ 0.51
ABCD4-205ENST00000469672 USP31Q70CQ4 1352 aa18.24■□□□□ 0.51
ABCD4-205ENST00000469672 CD163L1Q9NR16 1453 aa18.23■□□□□ 0.51
ABCD4-205ENST00000469672 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.23■□□□□ 0.51
ABCD4-205ENST00000469672 TIMELESSQ9UNS1 1208 aa18.23■□□□□ 0.51
ABCD4-205ENST00000469672 SRCAPQ6ZRS2 3230 aa18.23■□□□□ 0.51
ABCD4-205ENST00000469672 WDR17Q8IZU2 1322 aa18.22■□□□□ 0.51
ABCD4-205ENST00000469672 C11orf95C9JLR9 678 aaPredicted RBP18.21■□□□□ 0.51
ABCD4-205ENST00000469672 TRIM37O94972 964 aa18.21■□□□□ 0.51
ABCD4-205ENST00000469672 EN1Q05925 392 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms