RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 KCNQ2O43526 872 aa19.4■□□□□ 0.7
HDAC6-217ENST00000469223 PSME1Q06323 249 aa19.4■□□□□ 0.7
HDAC6-217ENST00000469223 PHF8Q9UPP1 1060 aa19.4■□□□□ 0.7
HDAC6-217ENST00000469223 C1QTNF8P60827 252 aa19.39■□□□□ 0.69
HDAC6-217ENST00000469223 NBPF8Q3BBV2 869 aa19.38■□□□□ 0.69
HDAC6-217ENST00000469223 NBPF14Q5TI25 921 aa19.38■□□□□ 0.69
HDAC6-217ENST00000469223 RGPD3A6NKT7 1758 aaPredicted RBP19.37■□□□□ 0.69
HDAC6-217ENST00000469223 RGPD4Q7Z3J3 1758 aa19.37■□□□□ 0.69
HDAC6-217ENST00000469223 FAM196AQ6ZSG2 479 aa19.37■□□□□ 0.69
HDAC6-217ENST00000469223 RPGRIP1LQ68CZ1 1315 aa19.36■□□□□ 0.69
HDAC6-217ENST00000469223 PHRF1Q9P1Y6 1649 aaKnown RBP19.33■□□□□ 0.69
HDAC6-217ENST00000469223 ABCC11Q96J66 1382 aa19.32■□□□□ 0.68
HDAC6-217ENST00000469223 ITGAEP38570 1179 aa19.32■□□□□ 0.68
HDAC6-217ENST00000469223 SPATA31A1Q5TZJ5 1347 aa19.3■□□□□ 0.68
HDAC6-217ENST00000469223 ADGRF5Q8IZF2 1346 aa19.3■□□□□ 0.68
HDAC6-217ENST00000469223 YTHDC2Q9H6S0 1430 aaKnown RBP19.3■□□□□ 0.68
HDAC6-217ENST00000469223 SBF2Q86WG5 1849 aa19.3■□□□□ 0.68
HDAC6-217ENST00000469223 TMEM132EQ6IEE7 984 aa19.28■□□□□ 0.68
HDAC6-217ENST00000469223 PRDM11Q9NQV5 511 aa19.27■□□□□ 0.68
HDAC6-217ENST00000469223 PARP4Q9UKK3 1724 aaKnown RBP19.27■□□□□ 0.68
HDAC6-217ENST00000469223 GOLGB1Q14789 3259 aaKnown RBP19.26■□□□□ 0.67
HDAC6-217ENST00000469223 PMFBP1Q8TBY8 1022 aa19.26■□□□□ 0.67
HDAC6-217ENST00000469223 PEAK1Q9H792 1746 aa19.25■□□□□ 0.67
HDAC6-217ENST00000469223 PIK3C2GO75747 1445 aa19.25■□□□□ 0.67
HDAC6-217ENST00000469223 ANKARQ7Z5J8 1434 aa19.25■□□□□ 0.67
HDAC6-217ENST00000469223 ANO8Q9HCE9 1232 aaPredicted RBP19.24■□□□□ 0.67
HDAC6-217ENST00000469223 STRN4Q9NRL3 753 aa19.24■□□□□ 0.67
HDAC6-217ENST00000469223 DLC1Q96QB1 1528 aa19.24■□□□□ 0.67
HDAC6-217ENST00000469223 PDE3BQ13370 1112 aa19.23■□□□□ 0.67
HDAC6-217ENST00000469223 USP35Q9P2H5 1018 aa19.23■□□□□ 0.67
HDAC6-217ENST00000469223 KIAA0232Q92628 1395 aa19.22■□□□□ 0.67
HDAC6-217ENST00000469223 ZBTB7AO95365 584 aa19.22■□□□□ 0.67
HDAC6-217ENST00000469223 PDGFDQ9GZP0 370 aaPredicted RBP19.22■□□□□ 0.67
HDAC6-217ENST00000469223 GPRASP1Q5JY77 1395 aa19.2■□□□□ 0.66
HDAC6-217ENST00000469223 SSH2Q76I76 1423 aa19.2■□□□□ 0.66
HDAC6-217ENST00000469223 GIGYF1O75420 1035 aaPredicted RBP19.2■□□□□ 0.66
HDAC6-217ENST00000469223 CHRNA2Q15822 529 aa19.2■□□□□ 0.66
HDAC6-217ENST00000469223 PTGER2P43116 358 aa19.19■□□□□ 0.66
HDAC6-217ENST00000469223 SAFB2Q14151 953 aaKnown RBP eCLIP19.19■□□□□ 0.66
HDAC6-217ENST00000469223 LRRC37A3O60309 1634 aa19.18■□□□□ 0.66
HDAC6-217ENST00000469223 SHANK3Q9BYB0 1731 aa19.18■□□□□ 0.66
HDAC6-217ENST00000469223 FHDC1Q9C0D6 1143 aaPredicted RBP19.18■□□□□ 0.66
HDAC6-217ENST00000469223 ACIN1Q9UKV3 1341 aaKnown RBP19.18■□□□□ 0.66
HDAC6-217ENST00000469223 LMO7Q8WWI1 1683 aa19.17■□□□□ 0.66
HDAC6-217ENST00000469223 ITSN1Q15811 1721 aa19.17■□□□□ 0.66
HDAC6-217ENST00000469223 ANKRD30BQ9BXX2 1392 aa19.17■□□□□ 0.66
HDAC6-217ENST00000469223 BARGINQ6ZT62 677 aa19.16■□□□□ 0.66
HDAC6-217ENST00000469223 WNK3Q9BYP7 1800 aa19.16■□□□□ 0.66
HDAC6-217ENST00000469223 OVOS2A0A0G2JMS6 1433 aa19.16■□□□□ 0.66
HDAC6-217ENST00000469223 OVOS2A0A0J9YW53 1432 aa19.16■□□□□ 0.66
HDAC6-217ENST00000469223 OVOS2Q6IE36 1432 aa19.16■□□□□ 0.66
HDAC6-217ENST00000469223 SPATA31E1Q6ZUB1 1445 aa19.16■□□□□ 0.66
HDAC6-217ENST00000469223 TULP4Q9NRJ4 1543 aa19.15■□□□□ 0.66
HDAC6-217ENST00000469223 AKAP12Q02952 1782 aa19.15■□□□□ 0.66
HDAC6-217ENST00000469223 SYT17Q9BSW7 474 aa19.15■□□□□ 0.66
HDAC6-217ENST00000469223 ATF5Q9Y2D1 282 aaPredicted RBP19.15■□□□□ 0.66
HDAC6-217ENST00000469223 PAK3O75914 559 aaPredicted RBP19.13■□□□□ 0.65
HDAC6-217ENST00000469223 RGL3Q3MIN7 710 aa19.13■□□□□ 0.65
HDAC6-217ENST00000469223 SIRT1Q96EB6 747 aa19.13■□□□□ 0.65
HDAC6-217ENST00000469223 PRAM1Q96QH2 718 aa19.13■□□□□ 0.65
HDAC6-217ENST00000469223 PRR36Q9H6K5 1346 aa19.11■□□□□ 0.65
HDAC6-217ENST00000469223 BCL11BQ9C0K0 894 aaPredicted RBP19.11■□□□□ 0.65
HDAC6-217ENST00000469223 ATP7BP35670 1465 aa19.1■□□□□ 0.65
HDAC6-217ENST00000469223 ZC3H6P61129 1189 aaKnown RBP19.1■□□□□ 0.65
HDAC6-217ENST00000469223 LARP1Q6PKG0 1096 aaKnown RBP19.1■□□□□ 0.65
HDAC6-217ENST00000469223 TCP11L2Q8N4U5 519 aa19.1■□□□□ 0.65
HDAC6-217ENST00000469223 EIF3AQ14152 1382 aaKnown RBP19.07■□□□□ 0.64
HDAC6-217ENST00000469223 DHX57Q6P158 1386 aaKnown RBP19.07■□□□□ 0.64
HDAC6-217ENST00000469223 PLSCR1O15162 318 aa19.07■□□□□ 0.64
HDAC6-217ENST00000469223 EVA1CP58658 441 aa19.07■□□□□ 0.64
HDAC6-217ENST00000469223 HIRIP3Q9BW71 556 aaPredicted RBP19.07■□□□□ 0.64
HDAC6-217ENST00000469223 SLC4A1APQ9BWU0 796 aaKnown RBP19.07■□□□□ 0.64
HDAC6-217ENST00000469223 TOPAZ1Q8N9V7 1692 aa19.06■□□□□ 0.64
HDAC6-217ENST00000469223 NGDNQ8NEJ9 315 aaKnown RBP19.06■□□□□ 0.64
HDAC6-217ENST00000469223 PTF1AQ7RTS3 328 aa19.05■□□□□ 0.64
HDAC6-217ENST00000469223 SGIP1Q9BQI5 828 aa19.05■□□□□ 0.64
HDAC6-217ENST00000469223 POGKQ9P215 609 aa19.05■□□□□ 0.64
HDAC6-217ENST00000469223 MAP3K5Q99683 1374 aa19.05■□□□□ 0.64
HDAC6-217ENST00000469223 COL5A2P05997 1499 aaPredicted RBP19.04■□□□□ 0.64
HDAC6-217ENST00000469223 NUTM2GQ5VZR2 741 aa19.04■□□□□ 0.64
HDAC6-217ENST00000469223 MTFR1LQ9H019 292 aa19.04■□□□□ 0.64
HDAC6-217ENST00000469223 STK32BQ9NY57 414 aa19.04■□□□□ 0.64
HDAC6-217ENST00000469223 C11orf95C9JLR9 678 aaPredicted RBP19.03■□□□□ 0.64
HDAC6-217ENST00000469223 PAPPAQ13219 1627 aa19.03■□□□□ 0.64
HDAC6-217ENST00000469223 GPR162Q16538 588 aa19.02■□□□□ 0.64
HDAC6-217ENST00000469223 PROM2Q8N271 834 aa19.02■□□□□ 0.64
HDAC6-217ENST00000469223 C14orf93Q9H972 538 aaKnown RBP19.02■□□□□ 0.64
HDAC6-217ENST00000469223 MINK1Q8N4C8 1332 aaPredicted RBP19.01■□□□□ 0.63
HDAC6-217ENST00000469223 CFAP70Q5T0N1 1121 aa19.01■□□□□ 0.63
HDAC6-217ENST00000469223 ARXQ96QS3 562 aa19.01■□□□□ 0.63
HDAC6-217ENST00000469223 THRAP3Q9Y2W1 955 aaKnown RBP19.01■□□□□ 0.63
HDAC6-217ENST00000469223 ADGRB1O14514 1584 aa19.01■□□□□ 0.63
HDAC6-217ENST00000469223 SLC15A2Q16348 729 aa18.99■□□□□ 0.63
HDAC6-217ENST00000469223 CRB1P82279 1406 aa18.99■□□□□ 0.63
HDAC6-217ENST00000469223 CPDO75976 1380 aa18.98■□□□□ 0.63
HDAC6-217ENST00000469223 PELP1Q8IZL8 1130 aaKnown RBP18.97■□□□□ 0.63
HDAC6-217ENST00000469223 NHSQ6T4R5 1651 aa18.97■□□□□ 0.63
HDAC6-217ENST00000469223 ARHGEF28Q8N1W1 1705 aaKnown RBP18.97■□□□□ 0.63
HDAC6-217ENST00000469223 TXNRD1Q16881 649 aa18.96■□□□□ 0.63
HDAC6-217ENST00000469223 COL24A1Q17RW2 1714 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms