RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 NUTM2AQ8IVF1 878 aaPredicted RBP6.44□□□□□ -1.38
TMEM39A-204ENST00000468545 SCUBE3Q8IX30 993 aa6.44□□□□□ -1.38
TMEM39A-204ENST00000468545 CABLES1Q8TDN4 633 aa6.44□□□□□ -1.38
TMEM39A-204ENST00000468545 TTBK1Q5TCY1 1321 aaPredicted RBP6.44□□□□□ -1.38
TMEM39A-204ENST00000468545 TNIKQ9UKE5 1360 aa6.44□□□□□ -1.38
TMEM39A-204ENST00000468545 KIF21BO75037 1637 aa6.43□□□□□ -1.38
TMEM39A-204ENST00000468545 CUL7Q14999 1698 aa6.43□□□□□ -1.38
TMEM39A-204ENST00000468545 RGS20O76081 388 aa6.43□□□□□ -1.38
TMEM39A-204ENST00000468545 FMNL1O95466 1100 aaPredicted RBP6.43□□□□□ -1.38
TMEM39A-204ENST00000468545 TJAP1Q5JTD0 557 aa6.43□□□□□ -1.38
TMEM39A-204ENST00000468545 FBXO31Q5XUX0 539 aaPredicted RBP6.43□□□□□ -1.38
TMEM39A-204ENST00000468545 BRICD5Q6PL45 260 aa6.43□□□□□ -1.38
TMEM39A-204ENST00000468545 RNF19BQ6ZMZ0 732 aa6.43□□□□□ -1.38
TMEM39A-204ENST00000468545 RETREG3Q86VR2 466 aa6.43□□□□□ -1.38
TMEM39A-204ENST00000468545 THAP11Q96EK4 314 aa6.43□□□□□ -1.38
TMEM39A-204ENST00000468545 IL21Q9HBE4 155 aa6.43□□□□□ -1.38
TMEM39A-204ENST00000468545 MAGI1Q96QZ7 1491 aaPredicted RBP6.42□□□□□ -1.38
TMEM39A-204ENST00000468545 ZPR1O75312 459 aa6.42□□□□□ -1.38
TMEM39A-204ENST00000468545 RTL5Q5HYW3 569 aaPredicted RBP6.42□□□□□ -1.38
TMEM39A-204ENST00000468545 SYMPKQ92797 1274 aaKnown RBP6.42□□□□□ -1.38
TMEM39A-204ENST00000468545 ADAMTS12P58397 1594 aa6.42□□□□□ -1.38
TMEM39A-204ENST00000468545 SYNJ2O15056 1496 aa6.41□□□□□ -1.38
TMEM39A-204ENST00000468545 TMEM259Q4ZIN3 620 aa6.41□□□□□ -1.38
TMEM39A-204ENST00000468545 USB1Q9BQ65 265 aaKnown RBP6.41□□□□□ -1.38
TMEM39A-204ENST00000468545 GRIN2AQ12879 1464 aa6.41□□□□□ -1.38
TMEM39A-204ENST00000468545 CFAP99D6REC4 459 aa6.4□□□□□ -1.38
TMEM39A-204ENST00000468545 TLL1O43897 1013 aa6.4□□□□□ -1.38
TMEM39A-204ENST00000468545 ADH1BP00325 375 aa6.4□□□□□ -1.38
TMEM39A-204ENST00000468545 MSS51Q4VC12 460 aa6.4□□□□□ -1.38
TMEM39A-204ENST00000468545 HELBQ8NG08 1087 aaPredicted RBP6.4□□□□□ -1.38
TMEM39A-204ENST00000468545 PRR7Q8TB68 274 aa6.4□□□□□ -1.38
TMEM39A-204ENST00000468545 SPSB2Q99619 263 aa6.4□□□□□ -1.38
TMEM39A-204ENST00000468545 FLIIQ13045 1269 aa6.39□□□□□ -1.39
TMEM39A-204ENST00000468545 DESI1Q6ICB0 168 aa6.39□□□□□ -1.39
TMEM39A-204ENST00000468545 BANK1Q8NDB2 785 aa6.39□□□□□ -1.39
TMEM39A-204ENST00000468545 ZNF516Q92618 1163 aa6.39□□□□□ -1.39
TMEM39A-204ENST00000468545 CLIP1P30622 1438 aa6.39□□□□□ -1.39
TMEM39A-204ENST00000468545 CEP162Q5TB80 1403 aa6.39□□□□□ -1.39
TMEM39A-204ENST00000468545 AP1G2O75843 785 aa6.38□□□□□ -1.39
TMEM39A-204ENST00000468545 CHD1O14646 1710 aa6.37□□□□□ -1.39
TMEM39A-204ENST00000468545 USP17L8P0C7I0 530 aa6.37□□□□□ -1.39
TMEM39A-204ENST00000468545 JUNDP17535 347 aa6.37□□□□□ -1.39
TMEM39A-204ENST00000468545 MCM6Q14566 821 aa6.37□□□□□ -1.39
TMEM39A-204ENST00000468545 PPARGC1BQ86YN6 1023 aaKnown RBP6.37□□□□□ -1.39
TMEM39A-204ENST00000468545 FAM160A2Q8N612 972 aaPredicted RBP6.37□□□□□ -1.39
TMEM39A-204ENST00000468545 TSC1Q92574 1164 aa6.37□□□□□ -1.39
TMEM39A-204ENST00000468545 IRX2Q9BZI1 471 aaPredicted RBP6.37□□□□□ -1.39
TMEM39A-204ENST00000468545 CEP170Q5SW79 1584 aa6.36□□□□□ -1.39
TMEM39A-204ENST00000468545 SOCS7O14512 581 aa6.36□□□□□ -1.39
TMEM39A-204ENST00000468545 MMP16P51512 607 aa6.36□□□□□ -1.39
TMEM39A-204ENST00000468545 PRDM9Q9NQV7 894 aa6.36□□□□□ -1.39
TMEM39A-204ENST00000468545 KIAA0586Q9BVV6 1533 aa6.35□□□□□ -1.39
TMEM39A-204ENST00000468545 NUP160Q12769 1436 aa6.35□□□□□ -1.39
TMEM39A-204ENST00000468545 DXOO77932 396 aaKnown RBP6.35□□□□□ -1.39
TMEM39A-204ENST00000468545 CTDSPL2Q05D32 466 aa6.35□□□□□ -1.39
TMEM39A-204ENST00000468545 ERICH6Q7L0X2 663 aa6.35□□□□□ -1.39
TMEM39A-204ENST00000468545 SLC6A16Q9GZN6 736 aa6.35□□□□□ -1.39
TMEM39A-204ENST00000468545 CTTNBP2Q8WZ74 1663 aa6.34□□□□□ -1.39
TMEM39A-204ENST00000468545 ARID3CA6NKF2 412 aa6.34□□□□□ -1.39
TMEM39A-204ENST00000468545 APBB1O00213 710 aa6.34□□□□□ -1.39
TMEM39A-204ENST00000468545 PTPRNQ16849 979 aa6.34□□□□□ -1.39
TMEM39A-204ENST00000468545 LYPD8Q6UX82 237 aa6.34□□□□□ -1.39
TMEM39A-204ENST00000468545 NKX2-3Q8TAU0 364 aa6.34□□□□□ -1.39
TMEM39A-204ENST00000468545 IQGAP2Q13576 1575 aa6.34□□□□□ -1.39
TMEM39A-204ENST00000468545 FHOD3Q2V2M9 1422 aa6.33□□□□□ -1.4
TMEM39A-204ENST00000468545 PER1O15534 1290 aaPredicted RBP6.33□□□□□ -1.4
TMEM39A-204ENST00000468545 S1PR4O95977 384 aa6.33□□□□□ -1.4
TMEM39A-204ENST00000468545 PPP1R18Q6NYC8 613 aa6.33□□□□□ -1.4
TMEM39A-204ENST00000468545 MTMR14Q8NCE2 650 aa6.33□□□□□ -1.4
TMEM39A-204ENST00000468545 SNRKQ9NRH2 765 aa6.33□□□□□ -1.4
TMEM39A-204ENST00000468545 ARHGAP35Q9NRY4 1499 aa6.33□□□□□ -1.4
TMEM39A-204ENST00000468545 PRG4Q92954 1404 aaPredicted RBP6.33□□□□□ -1.4
TMEM39A-204ENST00000468545 C14orf37Q86TY3 774 aa6.32□□□□□ -1.4
TMEM39A-204ENST00000468545 LRRN4Q8WUT4 740 aa6.32□□□□□ -1.4
TMEM39A-204ENST00000468545 CARMIL2Q6F5E8 1435 aa6.32□□□□□ -1.4
TMEM39A-204ENST00000468545 ARAP1Q96P48 1450 aa6.31□□□□□ -1.4
TMEM39A-204ENST00000468545 CCNYL3P0C7X3 344 aa6.31□□□□□ -1.4
TMEM39A-204ENST00000468545 GGCXP38435 758 aa6.31□□□□□ -1.4
TMEM39A-204ENST00000468545 NUDT12Q9BQG2 462 aa6.31□□□□□ -1.4
TMEM39A-204ENST00000468545 HMX1Q9NP08 348 aaPredicted RBP6.31□□□□□ -1.4
TMEM39A-204ENST00000468545 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.31□□□□□ -1.4
TMEM39A-204ENST00000468545 F12P00748 615 aaPredicted RBP6.3□□□□□ -1.4
TMEM39A-204ENST00000468545 GJD4Q96KN9 370 aaPredicted RBP6.3□□□□□ -1.4
TMEM39A-204ENST00000468545 PRKD2Q9BZL6 878 aa6.3□□□□□ -1.4
TMEM39A-204ENST00000468545 UGGT2Q9NYU1 1516 aa6.3□□□□□ -1.4
TMEM39A-204ENST00000468545 PTPRGP23470 1445 aa6.29□□□□□ -1.4
TMEM39A-204ENST00000468545 TRIM34Q9BYJ4 488 aa6.29□□□□□ -1.4
TMEM39A-204ENST00000468545 PRM3Q9NNZ6 103 aa6.29□□□□□ -1.4
TMEM39A-204ENST00000468545 TIMELESSQ9UNS1 1208 aa6.29□□□□□ -1.4
TMEM39A-204ENST00000468545 NDUFB9Q9Y6M9 179 aa6.29□□□□□ -1.4
TMEM39A-204ENST00000468545 DISP1Q96F81 1524 aa6.29□□□□□ -1.4
TMEM39A-204ENST00000468545 VPS8Q8N3P4 1428 aa6.28□□□□□ -1.4
TMEM39A-204ENST00000468545 RNF223E7ERA6 249 aa6.28□□□□□ -1.4
TMEM39A-204ENST00000468545 ANKLE1Q8NAG6 615 aa6.28□□□□□ -1.4
TMEM39A-204ENST00000468545 EVA1BQ9NVM1 165 aa6.28□□□□□ -1.4
TMEM39A-204ENST00000468545 MAP10Q9P2G4 905 aa6.28□□□□□ -1.4
TMEM39A-204ENST00000468545 FCF1Q9Y324 198 aaKnown RBP6.28□□□□□ -1.4
TMEM39A-204ENST00000468545 EFCAB5A4FU69 1503 aa6.28□□□□□ -1.4
TMEM39A-204ENST00000468545 CLASP1Q7Z460 1538 aa6.28□□□□□ -1.4
TMEM39A-204ENST00000468545 ERCC6L2Q5T890 1561 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms