RNA–Protein interactions for RNA: ENST00000465887.2

POLR1D-204, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 2

Gene POLR1D, Length 2,118 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-204ENST00000465887 NGDNQ8NEJ9 315 aaKnown RBP21.52■■□□□ 1.04
POLR1D-204ENST00000465887 ZNF692Q9BU19 519 aaPredicted RBP21.52■■□□□ 1.04
POLR1D-204ENST00000465887 RALBP1Q15311 655 aa21.51■■□□□ 1.03
POLR1D-204ENST00000465887 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.51■■□□□ 1.03
POLR1D-204ENST00000465887 NSD2O96028 1365 aa21.51■■□□□ 1.03
POLR1D-204ENST00000465887 MAP2P11137 1827 aaKnown RBP21.5■■□□□ 1.03
POLR1D-204ENST00000465887 USP54Q70EL1 1684 aa21.49■■□□□ 1.03
POLR1D-204ENST00000465887 FYB1O15117 783 aa21.49■■□□□ 1.03
POLR1D-204ENST00000465887 CCDC184Q52MB2 194 aa21.48■■□□□ 1.03
POLR1D-204ENST00000465887 GGNBP2Q9H3C7 697 aa21.48■■□□□ 1.03
POLR1D-204ENST00000465887 CCER2I3L3R5 266 aa21.47■■□□□ 1.03
POLR1D-204ENST00000465887 TTC21BQ7Z4L5 1316 aa21.47■■□□□ 1.03
POLR1D-204ENST00000465887 MYBBP1AQ9BQG0 1328 aaKnown RBP21.47■■□□□ 1.03
POLR1D-204ENST00000465887 NME9Q86XW9 330 aa21.47■■□□□ 1.03
POLR1D-204ENST00000465887 NHSL1Q5SYE7 1610 aa21.45■■□□□ 1.02
POLR1D-204ENST00000465887 ALS2Q96Q42 1657 aa21.45■■□□□ 1.02
POLR1D-204ENST00000465887 ZRANB1Q9UGI0 708 aa21.45■■□□□ 1.02
POLR1D-204ENST00000465887 FOXO3O43524 673 aa21.44■■□□□ 1.02
POLR1D-204ENST00000465887 ROBO1Q9Y6N7 1651 aa21.43■■□□□ 1.02
POLR1D-204ENST00000465887 MORC1Q86VD1 984 aa21.43■■□□□ 1.02
POLR1D-204ENST00000465887 SLAIN2Q9P270 581 aa21.43■■□□□ 1.02
POLR1D-204ENST00000465887 OVOS2A0A0J9YW53 1432 aa21.42■■□□□ 1.02
POLR1D-204ENST00000465887 PPP2R1AP30153 589 aa21.42■■□□□ 1.02
POLR1D-204ENST00000465887 OVOS2Q6IE36 1432 aa21.42■■□□□ 1.02
POLR1D-204ENST00000465887 TTC21AQ8NDW8 1320 aa21.41■■□□□ 1.02
POLR1D-204ENST00000465887 XPCQ01831 940 aaPredicted RBP21.41■■□□□ 1.02
POLR1D-204ENST00000465887 BRINP3Q76B58 766 aa21.41■■□□□ 1.02
POLR1D-204ENST00000465887 DDX17Q92841 729 aaKnown RBP21.41■■□□□ 1.02
POLR1D-204ENST00000465887 PXDNQ92626 1479 aa21.4■■□□□ 1.02
POLR1D-204ENST00000465887 TNNT2P45379 298 aaPredicted RBP21.4■■□□□ 1.02
POLR1D-204ENST00000465887 PSME1Q06323 249 aa21.4■■□□□ 1.02
POLR1D-204ENST00000465887 BRD4O60885 1362 aaPredicted RBP21.39■■□□□ 1.02
POLR1D-204ENST00000465887 NLRP13Q86W25 1043 aa21.39■■□□□ 1.01
POLR1D-204ENST00000465887 MRS2Q9HD23 443 aa21.38■■□□□ 1.01
POLR1D-204ENST00000465887 PAK3O75914 559 aaPredicted RBP21.37■■□□□ 1.01
POLR1D-204ENST00000465887 LTN1O94822 1766 aa21.36■■□□□ 1.01
POLR1D-204ENST00000465887 CRYBG1Q9Y4K1 1723 aa21.36■■□□□ 1.01
POLR1D-204ENST00000465887 KRT28Q7Z3Y7 464 aa21.36■■□□□ 1.01
POLR1D-204ENST00000465887 USP31Q70CQ4 1352 aa21.36■■□□□ 1.01
POLR1D-204ENST00000465887 SHPRHQ149N8 1683 aa21.36■■□□□ 1.01
POLR1D-204ENST00000465887 COG3Q96JB2 828 aa21.35■■□□□ 1.01
POLR1D-204ENST00000465887 BCL11AQ9H165 835 aa21.35■■□□□ 1.01
POLR1D-204ENST00000465887 NPHP3Q7Z494 1330 aa21.34■■□□□ 1.01
POLR1D-204ENST00000465887 FBLN1P23142 703 aa21.34■■□□□ 1.01
POLR1D-204ENST00000465887 IQSEC2Q5JU85 1478 aa21.33■■□□□ 1.01
POLR1D-204ENST00000465887 PEAK1Q9H792 1746 aa21.33■■□□□ 1.01
POLR1D-204ENST00000465887 NUTM2GQ5VZR2 741 aa21.33■■□□□ 1.01
POLR1D-204ENST00000465887 ABTB2Q8N961 1025 aa21.33■■□□□ 1.01
POLR1D-204ENST00000465887 PHRF1Q9P1Y6 1649 aaKnown RBP21.32■■□□□ 1
POLR1D-204ENST00000465887 AHDC1Q5TGY3 1603 aaPredicted RBP21.31■■□□□ 1
POLR1D-204ENST00000465887 SBNO1A3KN83 1393 aa21.3■■□□□ 1
POLR1D-204ENST00000465887 ABCA3Q99758 1704 aa21.3■■□□□ 1
POLR1D-204ENST00000465887 NLRP6P59044 892 aa21.3■■□□□ 1
POLR1D-204ENST00000465887 TNS3Q68CZ2 1445 aa21.3■■□□□ 1
POLR1D-204ENST00000465887 SLIT3O75094 1523 aa21.29■■□□□ 1
POLR1D-204ENST00000465887 MTHFSP49914 203 aa21.29■■□□□ 1
POLR1D-204ENST00000465887 MED1Q15648 1581 aaPredicted RBP21.29■■□□□ 1
POLR1D-204ENST00000465887 AATKQ6ZMQ8 1374 aa21.29■■□□□ 1
POLR1D-204ENST00000465887 PHLPP1O60346 1717 aa21.29■■□□□ 1
POLR1D-204ENST00000465887 SMG6Q86US8 1419 aaKnown RBP21.29■■□□□ 1
POLR1D-204ENST00000465887 NFAT5O94916 1531 aa21.28■■□□□ 1
POLR1D-204ENST00000465887 SOS2Q07890 1332 aaPredicted RBP21.28■■□□□ 1
POLR1D-204ENST00000465887 COL3A1P02461 1466 aaPredicted RBP21.28■■□□□ 1
POLR1D-204ENST00000465887 ANP32EQ9BTT0 268 aa21.28■■□□□ 1
POLR1D-204ENST00000465887 PNISRQ8TF01 805 aaKnown RBP21.26■□□□□ 0.99
POLR1D-204ENST00000465887 SOX12O15370 315 aa21.26■□□□□ 0.99
POLR1D-204ENST00000465887 POLKQ9UBT6 870 aa21.26■□□□□ 0.99
POLR1D-204ENST00000465887 SPATA31A3Q5VYP0 1347 aa21.25■□□□□ 0.99
POLR1D-204ENST00000465887 LMOD2Q6P5Q4 547 aa21.25■□□□□ 0.99
POLR1D-204ENST00000465887 CERKQ8TCT0 537 aa21.25■□□□□ 0.99
POLR1D-204ENST00000465887 CDK12Q9NYV4 1490 aaPredicted RBP21.25■□□□□ 0.99
POLR1D-204ENST00000465887 RRS1Q15050 365 aaKnown RBP21.25■□□□□ 0.99
POLR1D-204ENST00000465887 EMILIN1Q9Y6C2 1016 aa21.25■□□□□ 0.99
POLR1D-204ENST00000465887 COL16A1Q07092 1604 aaPredicted RBP21.25■□□□□ 0.99
POLR1D-204ENST00000465887 RGPD5Q99666 1765 aa21.24■□□□□ 0.99
POLR1D-204ENST00000465887 FAM9BQ8IZU0 186 aa21.24■□□□□ 0.99
POLR1D-204ENST00000465887 TOM1O60784 492 aa21.23■□□□□ 0.99
POLR1D-204ENST00000465887 USP19O94966 1318 aa21.23■□□□□ 0.99
POLR1D-204ENST00000465887 YTHDC1Q96MU7 727 aaKnown RBP21.23■□□□□ 0.99
POLR1D-204ENST00000465887 UBAP1LF5GYI3 381 aa21.22■□□□□ 0.99
POLR1D-204ENST00000465887 PNPLA6Q8IY17 1366 aa21.21■□□□□ 0.99
POLR1D-204ENST00000465887 PLEKHG5O94827 1062 aa21.2■□□□□ 0.98
POLR1D-204ENST00000465887 PIP4K2BP78356 416 aa21.2■□□□□ 0.98
POLR1D-204ENST00000465887 PPM1GO15355 546 aaPredicted RBP21.2■□□□□ 0.98
POLR1D-204ENST00000465887 ARHGEF10O15013 1369 aa21.2■□□□□ 0.98
POLR1D-204ENST00000465887 MAP3K19Q56UN5 1328 aa21.19■□□□□ 0.98
POLR1D-204ENST00000465887 COL22A1Q8NFW1 1626 aaPredicted RBP21.18■□□□□ 0.98
POLR1D-204ENST00000465887 INSRP06213 1382 aa21.18■□□□□ 0.98
POLR1D-204ENST00000465887 RGPD2P0DJD1 1756 aa21.17■□□□□ 0.98
POLR1D-204ENST00000465887 CFAP53Q96M91 514 aa21.17■□□□□ 0.98
POLR1D-204ENST00000465887 COL18A1P39060 1754 aa21.17■□□□□ 0.98
POLR1D-204ENST00000465887 RGPD1P0DJD0 1748 aa21.17■□□□□ 0.98
POLR1D-204ENST00000465887 GCP02774 474 aa21.16■□□□□ 0.98
POLR1D-204ENST00000465887 CABLES1Q8TDN4 633 aa21.16■□□□□ 0.98
POLR1D-204ENST00000465887 KCNH5Q8NCM2 988 aa21.15■□□□□ 0.98
POLR1D-204ENST00000465887 ADAMTS8Q9UP79 889 aa21.13■□□□□ 0.97
POLR1D-204ENST00000465887 FLT4P35916 1363 aa21.13■□□□□ 0.97
POLR1D-204ENST00000465887 BLMP54132 1417 aaPredicted RBP21.13■□□□□ 0.97
POLR1D-204ENST00000465887 WDR43Q15061 677 aaKnown RBP eCLIP21.13■□□□□ 0.97
POLR1D-204ENST00000465887 HSP90AB2PQ58FF8 381 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms