RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 MYOM1P52179 1685 aa18.26■□□□□ 0.51
COL5A1-206ENST00000465877 PLEKHG3A1L390 1219 aa18.26■□□□□ 0.51
COL5A1-206ENST00000465877 C8orf37Q96NL8 207 aa18.26■□□□□ 0.51
COL5A1-206ENST00000465877 COL14A1Q05707 1796 aaKnown RBP18.26■□□□□ 0.51
COL5A1-206ENST00000465877 USP6P35125 1406 aa18.25■□□□□ 0.51
COL5A1-206ENST00000465877 LMOD2Q6P5Q4 547 aa18.25■□□□□ 0.51
COL5A1-206ENST00000465877 USP54Q70EL1 1684 aa18.25■□□□□ 0.51
COL5A1-206ENST00000465877 ZNF772Q68DY9 489 aaPredicted RBP18.23■□□□□ 0.51
COL5A1-206ENST00000465877 POTEAQ6S8J7 498 aa18.23■□□□□ 0.51
COL5A1-206ENST00000465877 CD163L1Q9NR16 1453 aa18.21■□□□□ 0.51
COL5A1-206ENST00000465877 BRD4O60885 1362 aaPredicted RBP18.21■□□□□ 0.51
COL5A1-206ENST00000465877 ST20-MTHFSA0A0A6YYL1 179 aa18.21■□□□□ 0.51
COL5A1-206ENST00000465877 PAK3O75914 559 aaPredicted RBP18.21■□□□□ 0.51
COL5A1-206ENST00000465877 TESK2Q96S53 571 aa18.21■□□□□ 0.51
COL5A1-206ENST00000465877 SLIT2O94813 1529 aa18.21■□□□□ 0.51
COL5A1-206ENST00000465877 HAP1P54257 671 aaPredicted RBP18.2■□□□□ 0.5
COL5A1-206ENST00000465877 CABLES1Q8TDN4 633 aa18.2■□□□□ 0.5
COL5A1-206ENST00000465877 CABP1Q9NZU7 370 aa18.2■□□□□ 0.5
COL5A1-206ENST00000465877 CPSF1Q10570 1443 aaKnown RBP18.2■□□□□ 0.5
COL5A1-206ENST00000465877 SSH2Q76I76 1423 aa18.2■□□□□ 0.5
COL5A1-206ENST00000465877 SLIT3O75094 1523 aa18.19■□□□□ 0.5
COL5A1-206ENST00000465877 PLEKHG5O94827 1062 aa18.19■□□□□ 0.5
COL5A1-206ENST00000465877 NGLY1Q96IV0 654 aa18.19■□□□□ 0.5
COL5A1-206ENST00000465877 BCL9LQ86UU0 1499 aa18.18■□□□□ 0.5
COL5A1-206ENST00000465877 CDK12Q9NYV4 1490 aaPredicted RBP18.18■□□□□ 0.5
COL5A1-206ENST00000465877 ATRNO75882 1429 aa18.17■□□□□ 0.5
COL5A1-206ENST00000465877 LMO7Q8WWI1 1683 aa18.17■□□□□ 0.5
COL5A1-206ENST00000465877 GLI3P10071 1580 aa18.17■□□□□ 0.5
COL5A1-206ENST00000465877 FNBP4Q8N3X1 1017 aaPredicted RBP18.16■□□□□ 0.5
COL5A1-206ENST00000465877 KIF20BQ96Q89 1820 aa18.16■□□□□ 0.5
COL5A1-206ENST00000465877 NINLQ9Y2I6 1382 aa18.16■□□□□ 0.5
COL5A1-206ENST00000465877 USP21Q9UK80 565 aa18.15■□□□□ 0.5
COL5A1-206ENST00000465877 USP19O94966 1318 aa18.15■□□□□ 0.5
COL5A1-206ENST00000465877 KTN1Q86UP2 1357 aaKnown RBP18.15■□□□□ 0.5
COL5A1-206ENST00000465877 RGS12O14924 1447 aa18.15■□□□□ 0.5
COL5A1-206ENST00000465877 A0A1W2PP64 1363 aa18.14■□□□□ 0.49
COL5A1-206ENST00000465877 LTN1O94822 1766 aa18.14■□□□□ 0.49
COL5A1-206ENST00000465877 NUTM2GQ5VZR2 741 aa18.13■□□□□ 0.49
COL5A1-206ENST00000465877 SLC24A1O60721 1099 aa18.12■□□□□ 0.49
COL5A1-206ENST00000465877 ABTB2Q8N961 1025 aa18.12■□□□□ 0.49
COL5A1-206ENST00000465877 PUS7Q96PZ0 661 aaKnown RBP18.12■□□□□ 0.49
COL5A1-206ENST00000465877 EDC4Q6P2E9 1401 aaKnown RBP18.12■□□□□ 0.49
COL5A1-206ENST00000465877 SOCS7O14512 581 aa18.11■□□□□ 0.49
COL5A1-206ENST00000465877 TMF1P82094 1093 aa18.11■□□□□ 0.49
COL5A1-206ENST00000465877 NFAT5O94916 1531 aa18.11■□□□□ 0.49
COL5A1-206ENST00000465877 KIAA0232Q92628 1395 aa18.1■□□□□ 0.49
COL5A1-206ENST00000465877 TTC21BQ7Z4L5 1316 aa18.1■□□□□ 0.49
COL5A1-206ENST00000465877 TTC21AQ8NDW8 1320 aa18.1■□□□□ 0.49
COL5A1-206ENST00000465877 TMC1Q8TDI8 760 aa18.1■□□□□ 0.49
COL5A1-206ENST00000465877 ZNF692Q9BU19 519 aaPredicted RBP18.1■□□□□ 0.49
COL5A1-206ENST00000465877 BRWD3Q6RI45 1802 aa18.09■□□□□ 0.49
COL5A1-206ENST00000465877 COL18A1P39060 1754 aa18.09■□□□□ 0.49
COL5A1-206ENST00000465877 RGPD5Q99666 1765 aa18.09■□□□□ 0.49
COL5A1-206ENST00000465877 QTRT2Q9H974 415 aaKnown RBP18.09■□□□□ 0.49
COL5A1-206ENST00000465877 TRPC5Q9UL62 973 aaPredicted RBP18.09■□□□□ 0.49
COL5A1-206ENST00000465877 WNK3Q9BYP7 1800 aa18.09■□□□□ 0.49
COL5A1-206ENST00000465877 EP400Q96L91 3159 aa18.08■□□□□ 0.49
COL5A1-206ENST00000465877 RXRBP28702 533 aa18.08■□□□□ 0.48
COL5A1-206ENST00000465877 RBM6P78332 1123 aaKnown RBP18.08■□□□□ 0.48
COL5A1-206ENST00000465877 CPDO75976 1380 aa18.07■□□□□ 0.48
COL5A1-206ENST00000465877 ANKRD36BQ8N2N9 1353 aa18.07■□□□□ 0.48
COL5A1-206ENST00000465877 HDGFL2Q7Z4V5 671 aaPredicted RBP18.07■□□□□ 0.48
COL5A1-206ENST00000465877 NLRP13Q86W25 1043 aa18.07■□□□□ 0.48
COL5A1-206ENST00000465877 UNC5CLQ8IV45 518 aa18.07■□□□□ 0.48
COL5A1-206ENST00000465877 SLC12A5Q9H2X9 1139 aa18.07■□□□□ 0.48
COL5A1-206ENST00000465877 PRDM11Q9NQV5 511 aa18.06■□□□□ 0.48
COL5A1-206ENST00000465877 ABCC6O95255 1503 aa18.06■□□□□ 0.48
COL5A1-206ENST00000465877 OVOS2A0A0J9YW53 1432 aa18.06■□□□□ 0.48
COL5A1-206ENST00000465877 OVOS2Q6IE36 1432 aa18.06■□□□□ 0.48
COL5A1-206ENST00000465877 EIF4G2P78344 907 aaKnown RBP eCLIP18.05■□□□□ 0.48
COL5A1-206ENST00000465877 TERF2IPQ9NYB0 399 aa18.05■□□□□ 0.48
COL5A1-206ENST00000465877 ANKRD26Q9UPS8 1709 aa18.05■□□□□ 0.48
COL5A1-206ENST00000465877 THSD7AQ9UPZ6 1657 aa18.05■□□□□ 0.48
COL5A1-206ENST00000465877 CAMTA1Q9Y6Y1 1673 aa18.05■□□□□ 0.48
COL5A1-206ENST00000465877 FAM83GA6ND36 823 aa18.04■□□□□ 0.48
COL5A1-206ENST00000465877 NLRP6P59044 892 aa18.04■□□□□ 0.48
COL5A1-206ENST00000465877 CDCA8Q53HL2 280 aa18.04■□□□□ 0.48
COL5A1-206ENST00000465877 HSPA5P11021 654 aaKnown RBP18.03■□□□□ 0.48
COL5A1-206ENST00000465877 ZC3H6P61129 1189 aaKnown RBP18.03■□□□□ 0.48
COL5A1-206ENST00000465877 BTG4Q9NY30 223 aa18.03■□□□□ 0.48
COL5A1-206ENST00000465877 USP31Q70CQ4 1352 aa18.03■□□□□ 0.48
COL5A1-206ENST00000465877 COL5A2P05997 1499 aaPredicted RBP18.02■□□□□ 0.48
COL5A1-206ENST00000465877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.02■□□□□ 0.48
COL5A1-206ENST00000465877 GCP02774 474 aa18.01■□□□□ 0.47
COL5A1-206ENST00000465877 CHRNA2Q15822 529 aa18.01■□□□□ 0.47
COL5A1-206ENST00000465877 VPS72Q15906 364 aa18.01■□□□□ 0.47
COL5A1-206ENST00000465877 GJD4Q96KN9 370 aaPredicted RBP18.01■□□□□ 0.47
COL5A1-206ENST00000465877 NME9Q86XW9 330 aa18■□□□□ 0.47
COL5A1-206ENST00000465877 FAM208AQ9UK61 1670 aaKnown RBP17.99■□□□□ 0.47
COL5A1-206ENST00000465877 CCDC9Q9Y3X0 531 aaKnown RBP17.98■□□□□ 0.47
COL5A1-206ENST00000465877 PARP4Q9UKK3 1724 aaKnown RBP17.98■□□□□ 0.47
COL5A1-206ENST00000465877 AATKQ6ZMQ8 1374 aa17.97■□□□□ 0.47
COL5A1-206ENST00000465877 ZRANB1Q9UGI0 708 aa17.97■□□□□ 0.47
COL5A1-206ENST00000465877 NSD3Q9BZ95 1437 aa17.97■□□□□ 0.47
COL5A1-206ENST00000465877 KCNH5Q8NCM2 988 aa17.96■□□□□ 0.47
COL5A1-206ENST00000465877 LRRC37A3O60309 1634 aa17.95■□□□□ 0.46
COL5A1-206ENST00000465877 ZBTB7CA1YPR0 619 aa17.95■□□□□ 0.46
COL5A1-206ENST00000465877 SOX12O15370 315 aa17.95■□□□□ 0.46
COL5A1-206ENST00000465877 SPATA31A5Q5VU36 1347 aa17.94■□□□□ 0.46
COL5A1-206ENST00000465877 SPATA31A7Q8IWB4 1347 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms