RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 PHLPP1O60346 1717 aa20.24■□□□□ 0.83
HLA-F-223ENST00000465459 SPATA31A3Q5VYP0 1347 aa20.24■□□□□ 0.83
HLA-F-223ENST00000465459 TTC21BQ7Z4L5 1316 aa20.24■□□□□ 0.83
HLA-F-223ENST00000465459 CARD14Q9BXL6 1004 aa20.23■□□□□ 0.83
HLA-F-223ENST00000465459 TRPM3Q9HCF6 1732 aaPredicted RBP20.22■□□□□ 0.83
HLA-F-223ENST00000465459 COL16A1Q07092 1604 aaPredicted RBP20.22■□□□□ 0.83
HLA-F-223ENST00000465459 ARHGEF10O15013 1369 aa20.21■□□□□ 0.83
HLA-F-223ENST00000465459 TNS3Q68CZ2 1445 aa20.21■□□□□ 0.83
HLA-F-223ENST00000465459 PAK3O75914 559 aaPredicted RBP20.21■□□□□ 0.83
HLA-F-223ENST00000465459 HSPA1LP34931 641 aa20.21■□□□□ 0.83
HLA-F-223ENST00000465459 NRKQ7Z2Y5 1582 aa20.21■□□□□ 0.83
HLA-F-223ENST00000465459 KNSTRNQ9Y448 316 aa20.2■□□□□ 0.82
HLA-F-223ENST00000465459 NSD3Q9BZ95 1437 aa20.19■□□□□ 0.82
HLA-F-223ENST00000465459 PER1O15534 1290 aaPredicted RBP20.19■□□□□ 0.82
HLA-F-223ENST00000465459 CGNL1Q0VF96 1302 aa20.19■□□□□ 0.82
HLA-F-223ENST00000465459 ABTB2Q8N961 1025 aa20.18■□□□□ 0.82
HLA-F-223ENST00000465459 ALS2Q96Q42 1657 aa20.17■□□□□ 0.82
HLA-F-223ENST00000465459 DDX10Q13206 875 aaKnown RBP20.17■□□□□ 0.82
HLA-F-223ENST00000465459 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.17■□□□□ 0.82
HLA-F-223ENST00000465459 JCADQ9P266 1359 aa20.17■□□□□ 0.82
HLA-F-223ENST00000465459 USP31Q70CQ4 1352 aa20.16■□□□□ 0.82
HLA-F-223ENST00000465459 NLRP13Q86W25 1043 aa20.15■□□□□ 0.82
HLA-F-223ENST00000465459 NSD2O96028 1365 aa20.15■□□□□ 0.82
HLA-F-223ENST00000465459 NPC1L1Q9UHC9 1359 aa20.15■□□□□ 0.82
HLA-F-223ENST00000465459 PNPLA6Q8IY17 1366 aa20.14■□□□□ 0.81
HLA-F-223ENST00000465459 FYB1O15117 783 aa20.14■□□□□ 0.81
HLA-F-223ENST00000465459 LMOD2Q6P5Q4 547 aa20.14■□□□□ 0.81
HLA-F-223ENST00000465459 NLRP6P59044 892 aa20.13■□□□□ 0.81
HLA-F-223ENST00000465459 NME9Q86XW9 330 aa20.13■□□□□ 0.81
HLA-F-223ENST00000465459 AMER1Q5JTC6 1135 aaPredicted RBP20.12■□□□□ 0.81
HLA-F-223ENST00000465459 PIK3C2AO00443 1686 aa20.12■□□□□ 0.81
HLA-F-223ENST00000465459 MED1Q15648 1581 aaPredicted RBP20.12■□□□□ 0.81
HLA-F-223ENST00000465459 USP19O94966 1318 aa20.11■□□□□ 0.81
HLA-F-223ENST00000465459 SHPRHQ149N8 1683 aa20.11■□□□□ 0.81
HLA-F-223ENST00000465459 COG3Q96JB2 828 aa20.11■□□□□ 0.81
HLA-F-223ENST00000465459 COL22A1Q8NFW1 1626 aaPredicted RBP20.11■□□□□ 0.81
HLA-F-223ENST00000465459 USP54Q70EL1 1684 aa20.1■□□□□ 0.81
HLA-F-223ENST00000465459 OVOS2A0A0J9YW53 1432 aa20.1■□□□□ 0.81
HLA-F-223ENST00000465459 OVOS2Q6IE36 1432 aa20.1■□□□□ 0.81
HLA-F-223ENST00000465459 SPATA31A6Q5VVP1 1343 aa20.09■□□□□ 0.81
HLA-F-223ENST00000465459 KIF20BQ96Q89 1820 aa20.09■□□□□ 0.81
HLA-F-223ENST00000465459 NUTM2GQ5VZR2 741 aa20.08■□□□□ 0.81
HLA-F-223ENST00000465459 KCNH5Q8NCM2 988 aa20.08■□□□□ 0.81
HLA-F-223ENST00000465459 GGNBP2Q9H3C7 697 aa20.08■□□□□ 0.81
HLA-F-223ENST00000465459 ZRANB1Q9UGI0 708 aa20.06■□□□□ 0.8
HLA-F-223ENST00000465459 SLIT3O75094 1523 aa20.06■□□□□ 0.8
HLA-F-223ENST00000465459 GCP02774 474 aa20.05■□□□□ 0.8
HLA-F-223ENST00000465459 ANKRD26Q9UPS8 1709 aa20.03■□□□□ 0.8
HLA-F-223ENST00000465459 MARF1Q9Y4F3 1742 aaKnown RBP20.03■□□□□ 0.8
HLA-F-223ENST00000465459 HAP1P54257 671 aaPredicted RBP20.03■□□□□ 0.8
HLA-F-223ENST00000465459 ILDR1Q86SU0 546 aaPredicted RBP20.03■□□□□ 0.8
HLA-F-223ENST00000465459 MORC1Q86VD1 984 aa20.03■□□□□ 0.8
HLA-F-223ENST00000465459 CABLES1Q8TDN4 633 aa20.03■□□□□ 0.8
HLA-F-223ENST00000465459 CRYBG1Q9Y4K1 1723 aa20.02■□□□□ 0.8
HLA-F-223ENST00000465459 CC2D1BQ5T0F9 858 aaKnown RBP20.01■□□□□ 0.79
HLA-F-223ENST00000465459 CPDO75976 1380 aa20■□□□□ 0.79
HLA-F-223ENST00000465459 AATKQ6ZMQ8 1374 aa20■□□□□ 0.79
HLA-F-223ENST00000465459 PHRF1Q9P1Y6 1649 aaKnown RBP20■□□□□ 0.79
HLA-F-223ENST00000465459 ABCA3Q99758 1704 aa19.99■□□□□ 0.79
HLA-F-223ENST00000465459 NFAT5O94916 1531 aa19.99■□□□□ 0.79
HLA-F-223ENST00000465459 NUTM2BA6NNL0 878 aaPredicted RBP19.97■□□□□ 0.79
HLA-F-223ENST00000465459 NUTM2EB1AL46 878 aaPredicted RBP19.97■□□□□ 0.79
HLA-F-223ENST00000465459 RALBP1Q15311 655 aa19.97■□□□□ 0.79
HLA-F-223ENST00000465459 ARHGEF25Q86VW2 580 aa19.97■□□□□ 0.79
HLA-F-223ENST00000465459 NUTM2AQ8IVF1 878 aaPredicted RBP19.97■□□□□ 0.79
HLA-F-223ENST00000465459 PARD3Q8TEW0 1356 aa19.96■□□□□ 0.79
HLA-F-223ENST00000465459 PLEKHG5O94827 1062 aa19.96■□□□□ 0.79
HLA-F-223ENST00000465459 KIF24Q5T7B8 1368 aa19.95■□□□□ 0.79
HLA-F-223ENST00000465459 ZC3H6P61129 1189 aaKnown RBP19.95■□□□□ 0.78
HLA-F-223ENST00000465459 KIAA0232Q92628 1395 aa19.95■□□□□ 0.78
HLA-F-223ENST00000465459 SOX12O15370 315 aa19.94■□□□□ 0.78
HLA-F-223ENST00000465459 PRDM11Q9NQV5 511 aa19.94■□□□□ 0.78
HLA-F-223ENST00000465459 LRP6O75581 1613 aa19.94■□□□□ 0.78
HLA-F-223ENST00000465459 ABCC6O95255 1503 aa19.93■□□□□ 0.78
HLA-F-223ENST00000465459 ADAMTS2O95450 1211 aa19.93■□□□□ 0.78
HLA-F-223ENST00000465459 TNNT2P45379 298 aaPredicted RBP19.92■□□□□ 0.78
HLA-F-223ENST00000465459 PRKRIP1Q9H875 184 aaPredicted RBP19.92■□□□□ 0.78
HLA-F-223ENST00000465459 POLKQ9UBT6 870 aa19.92■□□□□ 0.78
HLA-F-223ENST00000465459 MAP3K19Q56UN5 1328 aa19.92■□□□□ 0.78
HLA-F-223ENST00000465459 RTL1A6NKG5 1358 aa19.92■□□□□ 0.78
HLA-F-223ENST00000465459 FAM83GA6ND36 823 aa19.91■□□□□ 0.78
HLA-F-223ENST00000465459 CNGB1Q14028 1251 aaPredicted RBP19.91■□□□□ 0.78
HLA-F-223ENST00000465459 ANP32CO43423 234 aa19.9■□□□□ 0.78
HLA-F-223ENST00000465459 RRS1Q15050 365 aaKnown RBP19.9■□□□□ 0.78
HLA-F-223ENST00000465459 MEX3CQ5U5Q3 659 aaKnown RBP19.9■□□□□ 0.78
HLA-F-223ENST00000465459 SMG6Q86US8 1419 aaKnown RBP19.9■□□□□ 0.78
HLA-F-223ENST00000465459 FBLN1P23142 703 aa19.89■□□□□ 0.77
HLA-F-223ENST00000465459 AMPHP49418 695 aa19.89■□□□□ 0.77
HLA-F-223ENST00000465459 COL14A1Q05707 1796 aaKnown RBP19.89■□□□□ 0.77
HLA-F-223ENST00000465459 IP6K1Q92551 441 aa19.89■□□□□ 0.77
HLA-F-223ENST00000465459 FLT4P35916 1363 aa19.88■□□□□ 0.77
HLA-F-223ENST00000465459 PPP2R1AP30153 589 aa19.88■□□□□ 0.77
HLA-F-223ENST00000465459 DIEXFQ68CQ4 756 aaKnown RBP19.88■□□□□ 0.77
HLA-F-223ENST00000465459 FNBP4Q8N3X1 1017 aaPredicted RBP19.88■□□□□ 0.77
HLA-F-223ENST00000465459 MAP2P11137 1827 aaKnown RBP19.88■□□□□ 0.77
HLA-F-223ENST00000465459 BLMP54132 1417 aaPredicted RBP19.87■□□□□ 0.77
HLA-F-223ENST00000465459 MYBBP1AQ9BQG0 1328 aaKnown RBP19.87■□□□□ 0.77
HLA-F-223ENST00000465459 CHRNA2Q15822 529 aa19.87■□□□□ 0.77
HLA-F-223ENST00000465459 NGLY1Q96IV0 654 aa19.87■□□□□ 0.77
HLA-F-223ENST00000465459 EMILIN1Q9Y6C2 1016 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms