RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 HDGFL2Q7Z4V5 671 aaPredicted RBP23.57■■□□□ 1.36
USP39-211ENST00000465282 KTN1Q86UP2 1357 aaKnown RBP23.55■■□□□ 1.36
USP39-211ENST00000465282 PAK3O75914 559 aaPredicted RBP23.55■■□□□ 1.36
USP39-211ENST00000465282 CD163L1Q9NR16 1453 aa23.55■■□□□ 1.36
USP39-211ENST00000465282 SSH2Q76I76 1423 aa23.54■■□□□ 1.36
USP39-211ENST00000465282 MYOM1P52179 1685 aa23.53■■□□□ 1.36
USP39-211ENST00000465282 ANKRD36BQ8N2N9 1353 aa23.52■■□□□ 1.36
USP39-211ENST00000465282 TTC21AQ8NDW8 1320 aa23.52■■□□□ 1.36
USP39-211ENST00000465282 NRKQ7Z2Y5 1582 aa23.52■■□□□ 1.36
USP39-211ENST00000465282 LMOD2Q6P5Q4 547 aa23.51■■□□□ 1.35
USP39-211ENST00000465282 A0A1W2PP64 1363 aa23.51■■□□□ 1.35
USP39-211ENST00000465282 EDC4Q6P2E9 1401 aaKnown RBP23.5■■□□□ 1.35
USP39-211ENST00000465282 MED1Q15648 1581 aaPredicted RBP23.49■■□□□ 1.35
USP39-211ENST00000465282 ABTB2Q8N961 1025 aa23.49■■□□□ 1.35
USP39-211ENST00000465282 TTC21BQ7Z4L5 1316 aa23.49■■□□□ 1.35
USP39-211ENST00000465282 C11orf95C9JLR9 678 aaPredicted RBP23.47■■□□□ 1.35
USP39-211ENST00000465282 MARF1Q9Y4F3 1742 aaKnown RBP23.47■■□□□ 1.35
USP39-211ENST00000465282 NLRP13Q86W25 1043 aa23.46■■□□□ 1.35
USP39-211ENST00000465282 ABCA3Q99758 1704 aa23.46■■□□□ 1.35
USP39-211ENST00000465282 CRYBG1Q9Y4K1 1723 aa23.45■■□□□ 1.34
USP39-211ENST00000465282 KIF7Q2M1P5 1343 aa23.45■■□□□ 1.34
USP39-211ENST00000465282 NUTM2BA6NNL0 878 aaPredicted RBP23.45■■□□□ 1.34
USP39-211ENST00000465282 NUTM2EB1AL46 878 aaPredicted RBP23.45■■□□□ 1.34
USP39-211ENST00000465282 NUTM2AQ8IVF1 878 aaPredicted RBP23.45■■□□□ 1.34
USP39-211ENST00000465282 POLR3GLQ9BT43 218 aa23.45■■□□□ 1.34
USP39-211ENST00000465282 PIK3C2AO00443 1686 aa23.44■■□□□ 1.34
USP39-211ENST00000465282 LRP6O75581 1613 aa23.44■■□□□ 1.34
USP39-211ENST00000465282 USP54Q70EL1 1684 aa23.42■■□□□ 1.34
USP39-211ENST00000465282 HAP1P54257 671 aaPredicted RBP23.42■■□□□ 1.34
USP39-211ENST00000465282 MEX3CQ5U5Q3 659 aaKnown RBP23.42■■□□□ 1.34
USP39-211ENST00000465282 CCDC7Q96M83 1385 aa23.41■■□□□ 1.34
USP39-211ENST00000465282 NLRP6P59044 892 aa23.41■■□□□ 1.34
USP39-211ENST00000465282 PHRF1Q9P1Y6 1649 aaKnown RBP23.41■■□□□ 1.34
USP39-211ENST00000465282 USP19O94966 1318 aa23.4■■□□□ 1.34
USP39-211ENST00000465282 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.4■■□□□ 1.34
USP39-211ENST00000465282 CABLES1Q8TDN4 633 aa23.4■■□□□ 1.34
USP39-211ENST00000465282 USP31Q70CQ4 1352 aa23.4■■□□□ 1.34
USP39-211ENST00000465282 NUTM2GQ5VZR2 741 aa23.38■■□□□ 1.33
USP39-211ENST00000465282 WASHC2AQ641Q2 1341 aa23.37■■□□□ 1.33
USP39-211ENST00000465282 ADAMTS2O95450 1211 aa23.37■■□□□ 1.33
USP39-211ENST00000465282 CARD14Q9BXL6 1004 aa23.36■■□□□ 1.33
USP39-211ENST00000465282 SLIT3O75094 1523 aa23.36■■□□□ 1.33
USP39-211ENST00000465282 KIF20BQ96Q89 1820 aa23.36■■□□□ 1.33
USP39-211ENST00000465282 KCNH5Q8NCM2 988 aa23.35■■□□□ 1.33
USP39-211ENST00000465282 PANK3Q9H999 370 aa23.35■■□□□ 1.33
USP39-211ENST00000465282 GCP02774 474 aa23.34■■□□□ 1.33
USP39-211ENST00000465282 NME9Q86XW9 330 aa23.34■■□□□ 1.33
USP39-211ENST00000465282 NGLY1Q96IV0 654 aa23.34■■□□□ 1.33
USP39-211ENST00000465282 PHF23Q9BUL5 403 aaPredicted RBP23.34■■□□□ 1.33
USP39-211ENST00000465282 NSD3Q9BZ95 1437 aa23.33■■□□□ 1.33
USP39-211ENST00000465282 CPDO75976 1380 aa23.32■■□□□ 1.32
USP39-211ENST00000465282 PLEKHG5O94827 1062 aa23.32■■□□□ 1.32
USP39-211ENST00000465282 FNBP4Q8N3X1 1017 aaPredicted RBP23.32■■□□□ 1.32
USP39-211ENST00000465282 C8orf37Q96NL8 207 aa23.32■■□□□ 1.32
USP39-211ENST00000465282 COL14A1Q05707 1796 aaKnown RBP23.32■■□□□ 1.32
USP39-211ENST00000465282 CGNL1Q0VF96 1302 aa23.32■■□□□ 1.32
USP39-211ENST00000465282 NWD2Q9ULI1 1742 aa23.31■■□□□ 1.32
USP39-211ENST00000465282 FYB1O15117 783 aa23.31■■□□□ 1.32
USP39-211ENST00000465282 OVOS2A0A0J9YW53 1432 aa23.31■■□□□ 1.32
USP39-211ENST00000465282 OVOS2Q6IE36 1432 aa23.31■■□□□ 1.32
USP39-211ENST00000465282 ZNF772Q68DY9 489 aaPredicted RBP23.3■■□□□ 1.32
USP39-211ENST00000465282 COG3Q96JB2 828 aa23.3■■□□□ 1.32
USP39-211ENST00000465282 PRDM11Q9NQV5 511 aa23.28■■□□□ 1.32
USP39-211ENST00000465282 AFF2P51816 1311 aa23.28■■□□□ 1.32
USP39-211ENST00000465282 KIAA0232Q92628 1395 aa23.27■■□□□ 1.32
USP39-211ENST00000465282 FAM83GA6ND36 823 aa23.27■■□□□ 1.32
USP39-211ENST00000465282 ZRANB1Q9UGI0 708 aa23.27■■□□□ 1.32
USP39-211ENST00000465282 KNSTRNQ9Y448 316 aa23.27■■□□□ 1.32
USP39-211ENST00000465282 PLCH1Q4KWH8 1693 aa23.27■■□□□ 1.32
USP39-211ENST00000465282 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.27■■□□□ 1.32
USP39-211ENST00000465282 ANKRD26Q9UPS8 1709 aa23.27■■□□□ 1.32
USP39-211ENST00000465282 SLIT2O94813 1529 aa23.27■■□□□ 1.32
USP39-211ENST00000465282 NSD2O96028 1365 aa23.27■■□□□ 1.31
USP39-211ENST00000465282 ZC3H6P61129 1189 aaKnown RBP23.26■■□□□ 1.31
USP39-211ENST00000465282 NFAT5O94916 1531 aa23.26■■□□□ 1.31
USP39-211ENST00000465282 GGNBP2Q9H3C7 697 aa23.24■■□□□ 1.31
USP39-211ENST00000465282 RGS17Q9UGC6 210 aaPredicted RBP23.24■■□□□ 1.31
USP39-211ENST00000465282 USP21Q9UK80 565 aa23.24■■□□□ 1.31
USP39-211ENST00000465282 ARHGEF25Q86VW2 580 aa23.23■■□□□ 1.31
USP39-211ENST00000465282 ABCC6O95255 1503 aa23.23■■□□□ 1.31
USP39-211ENST00000465282 LTN1O94822 1766 aa23.22■■□□□ 1.31
USP39-211ENST00000465282 PER1O15534 1290 aaPredicted RBP23.22■■□□□ 1.31
USP39-211ENST00000465282 UNC5CLQ8IV45 518 aa23.22■■□□□ 1.31
USP39-211ENST00000465282 AATKQ6ZMQ8 1374 aa23.22■■□□□ 1.31
USP39-211ENST00000465282 BCL9LQ86UU0 1499 aa23.22■■□□□ 1.31
USP39-211ENST00000465282 LMO7Q8WWI1 1683 aa23.21■■□□□ 1.31
USP39-211ENST00000465282 COL18A1P39060 1754 aa23.19■■□□□ 1.3
USP39-211ENST00000465282 NRAPQ86VF7 1730 aa23.19■■□□□ 1.3
USP39-211ENST00000465282 BTG4Q9NY30 223 aa23.19■■□□□ 1.3
USP39-211ENST00000465282 TRPC5Q9UL62 973 aaPredicted RBP23.19■■□□□ 1.3
USP39-211ENST00000465282 NPC1L1Q9UHC9 1359 aa23.18■■□□□ 1.3
USP39-211ENST00000465282 SOX12O15370 315 aa23.18■■□□□ 1.3
USP39-211ENST00000465282 CHRNA2Q15822 529 aa23.18■■□□□ 1.3
USP39-211ENST00000465282 AMER1Q5JTC6 1135 aaPredicted RBP23.17■■□□□ 1.3
USP39-211ENST00000465282 QTRT2Q9H974 415 aaKnown RBP23.17■■□□□ 1.3
USP39-211ENST00000465282 ATRNO75882 1429 aa23.16■■□□□ 1.3
USP39-211ENST00000465282 CAMTA1Q9Y6Y1 1673 aa23.16■■□□□ 1.3
USP39-211ENST00000465282 MAP2P11137 1827 aaKnown RBP23.15■■□□□ 1.3
USP39-211ENST00000465282 KIF24Q5T7B8 1368 aa23.14■■□□□ 1.3
USP39-211ENST00000465282 RGPD5Q99666 1765 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms