RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 NEUROD1Q13562 356 aa22.25■■□□□ 1.15
HOXB3-204ENST00000465120 CCDC125Q86Z20 511 aa22.25■■□□□ 1.15
HOXB3-204ENST00000465120 CCDC61Q9Y6R9 512 aa22.25■■□□□ 1.15
HOXB3-204ENST00000465120 ALS2Q96Q42 1657 aa22.25■■□□□ 1.15
HOXB3-204ENST00000465120 L3MBTL2Q969R5 705 aa22.24■■□□□ 1.15
HOXB3-204ENST00000465120 SIN3AQ96ST3 1273 aa22.24■■□□□ 1.15
HOXB3-204ENST00000465120 NUTM2GQ5VZR2 741 aa22.23■■□□□ 1.15
HOXB3-204ENST00000465120 PRDM11Q9NQV5 511 aa22.23■■□□□ 1.15
HOXB3-204ENST00000465120 ACEP12821 1306 aa22.23■■□□□ 1.15
HOXB3-204ENST00000465120 CENPJQ9HC77 1338 aaPredicted RBP22.23■■□□□ 1.15
HOXB3-204ENST00000465120 NBPF8Q3BBV2 869 aa22.21■■□□□ 1.15
HOXB3-204ENST00000465120 EP400Q96L91 3159 aa22.2■■□□□ 1.14
HOXB3-204ENST00000465120 SF3B2Q13435 895 aaKnown RBP22.19■■□□□ 1.14
HOXB3-204ENST00000465120 FAM98CQ17RN3 349 aaKnown RBP22.19■■□□□ 1.14
HOXB3-204ENST00000465120 KRT27Q7Z3Y8 459 aa22.19■■□□□ 1.14
HOXB3-204ENST00000465120 CABP2Q9NPB3 220 aa22.19■■□□□ 1.14
HOXB3-204ENST00000465120 COL14A1Q05707 1796 aaKnown RBP22.19■■□□□ 1.14
HOXB3-204ENST00000465120 BRWD3Q6RI45 1802 aa22.19■■□□□ 1.14
HOXB3-204ENST00000465120 PLEKHG3A1L390 1219 aa22.18■■□□□ 1.14
HOXB3-204ENST00000465120 ONECUT3O60422 494 aaPredicted RBP22.18■■□□□ 1.14
HOXB3-204ENST00000465120 ZRANB1Q9UGI0 708 aa22.18■■□□□ 1.14
HOXB3-204ENST00000465120 ZC3H6P61129 1189 aaKnown RBP22.17■■□□□ 1.14
HOXB3-204ENST00000465120 ABTB2Q8N961 1025 aa22.17■■□□□ 1.14
HOXB3-204ENST00000465120 POLR3AO14802 1390 aaPredicted RBP22.16■■□□□ 1.14
HOXB3-204ENST00000465120 CHRNA2Q15822 529 aa22.16■■□□□ 1.14
HOXB3-204ENST00000465120 KIAA0232Q92628 1395 aa22.15■■□□□ 1.14
HOXB3-204ENST00000465120 STRN4Q9NRL3 753 aa22.15■■□□□ 1.14
HOXB3-204ENST00000465120 BLMP54132 1417 aaPredicted RBP22.14■■□□□ 1.14
HOXB3-204ENST00000465120 PPIP5K1Q6PFW1 1433 aa22.14■■□□□ 1.14
HOXB3-204ENST00000465120 NRAPQ86VF7 1730 aa22.14■■□□□ 1.14
HOXB3-204ENST00000465120 TOPAZ1Q8N9V7 1692 aa22.14■■□□□ 1.13
HOXB3-204ENST00000465120 CRYBG1Q9Y4K1 1723 aa22.13■■□□□ 1.13
HOXB3-204ENST00000465120 QRICH2Q9H0J4 1663 aa22.12■■□□□ 1.13
HOXB3-204ENST00000465120 EVA1CP58658 441 aa22.12■■□□□ 1.13
HOXB3-204ENST00000465120 SPATA31A5Q5VU36 1347 aa22.11■■□□□ 1.13
HOXB3-204ENST00000465120 SPATA31A7Q8IWB4 1347 aa22.11■■□□□ 1.13
HOXB3-204ENST00000465120 DEFB132Q7Z7B7 95 aa22.11■■□□□ 1.13
HOXB3-204ENST00000465120 CABP1Q9NZU7 370 aa22.11■■□□□ 1.13
HOXB3-204ENST00000465120 ROCK2O75116 1388 aaKnown RBP22.11■■□□□ 1.13
HOXB3-204ENST00000465120 NLRP13Q86W25 1043 aa22.1■■□□□ 1.13
HOXB3-204ENST00000465120 PHRF1Q9P1Y6 1649 aaKnown RBP22.09■■□□□ 1.13
HOXB3-204ENST00000465120 EVC2Q86UK5 1308 aa22.09■■□□□ 1.13
HOXB3-204ENST00000465120 USP35Q9P2H5 1018 aa22.08■■□□□ 1.13
HOXB3-204ENST00000465120 TRPM1Q7Z4N2 1603 aa22.07■■□□□ 1.12
HOXB3-204ENST00000465120 ZBTB7CA1YPR0 619 aa22.07■■□□□ 1.12
HOXB3-204ENST00000465120 FAM182BQ5T319 152 aa22.06■■□□□ 1.12
HOXB3-204ENST00000465120 SPATA31A1Q5TZJ5 1347 aa22.06■■□□□ 1.12
HOXB3-204ENST00000465120 GCP02774 474 aa22.04■■□□□ 1.12
HOXB3-204ENST00000465120 NLRP6P59044 892 aa22.04■■□□□ 1.12
HOXB3-204ENST00000465120 BAG6P46379 1132 aa22.03■■□□□ 1.12
HOXB3-204ENST00000465120 BRD4O60885 1362 aaPredicted RBP22.02■■□□□ 1.12
HOXB3-204ENST00000465120 USP19O94966 1318 aa22.02■■□□□ 1.12
HOXB3-204ENST00000465120 NRKQ7Z2Y5 1582 aa22.01■■□□□ 1.11
HOXB3-204ENST00000465120 USP6P35125 1406 aa22■■□□□ 1.11
HOXB3-204ENST00000465120 LARP1Q6PKG0 1096 aaKnown RBP22■■□□□ 1.11
HOXB3-204ENST00000465120 CPDO75976 1380 aa21.99■■□□□ 1.11
HOXB3-204ENST00000465120 SSH2Q76I76 1423 aa21.99■■□□□ 1.11
HOXB3-204ENST00000465120 CARD11Q9BXL7 1154 aa21.99■■□□□ 1.11
HOXB3-204ENST00000465120 PDE3BQ13370 1112 aa21.98■■□□□ 1.11
HOXB3-204ENST00000465120 ZNF692Q9BU19 519 aaPredicted RBP21.98■■□□□ 1.11
HOXB3-204ENST00000465120 TONSLQ96HA7 1378 aa21.98■■□□□ 1.11
HOXB3-204ENST00000465120 CAMTA1Q9Y6Y1 1673 aa21.98■■□□□ 1.11
HOXB3-204ENST00000465120 THSD7AQ9UPZ6 1657 aa21.97■■□□□ 1.11
HOXB3-204ENST00000465120 EN1Q05925 392 aaPredicted RBP21.96■■□□□ 1.11
HOXB3-204ENST00000465120 TCP11L2Q8N4U5 519 aa21.96■■□□□ 1.11
HOXB3-204ENST00000465120 FAM196AQ6ZSG2 479 aa21.95■■□□□ 1.1
HOXB3-204ENST00000465120 BARGINQ6ZT62 677 aa21.95■■□□□ 1.1
HOXB3-204ENST00000465120 SOX12O15370 315 aa21.94■■□□□ 1.1
HOXB3-204ENST00000465120 SRCAPQ6ZRS2 3230 aa21.94■■□□□ 1.1
HOXB3-204ENST00000465120 TRIM37O94972 964 aa21.93■■□□□ 1.1
HOXB3-204ENST00000465120 TTC21BQ7Z4L5 1316 aa21.93■■□□□ 1.1
HOXB3-204ENST00000465120 RGPD1P0DJD0 1748 aa21.92■■□□□ 1.1
HOXB3-204ENST00000465120 THRAP3Q9Y2W1 955 aaKnown RBP21.92■■□□□ 1.1
HOXB3-204ENST00000465120 LMO7Q8WWI1 1683 aa21.91■■□□□ 1.1
HOXB3-204ENST00000465120 KTN1Q86UP2 1357 aaKnown RBP21.91■■□□□ 1.1
HOXB3-204ENST00000465120 TMC1Q8TDI8 760 aa21.91■■□□□ 1.1
HOXB3-204ENST00000465120 PSDA5PKW4 1024 aaPredicted RBP21.9■■□□□ 1.1
HOXB3-204ENST00000465120 COL5A2P05997 1499 aaPredicted RBP21.9■■□□□ 1.1
HOXB3-204ENST00000465120 AATKQ6ZMQ8 1374 aa21.89■■□□□ 1.1
HOXB3-204ENST00000465120 PIK3C2AO00443 1686 aa21.89■■□□□ 1.1
HOXB3-204ENST00000465120 TTC21AQ8NDW8 1320 aa21.89■■□□□ 1.1
HOXB3-204ENST00000465120 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.09
HOXB3-204ENST00000465120 TOM1L2Q6ZVM7 507 aa21.89■■□□□ 1.09
HOXB3-204ENST00000465120 KCNH5Q8NCM2 988 aa21.89■■□□□ 1.09
HOXB3-204ENST00000465120 APBA3O96018 575 aa21.88■■□□□ 1.09
HOXB3-204ENST00000465120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.88■■□□□ 1.09
HOXB3-204ENST00000465120 SLIT3O75094 1523 aa21.88■■□□□ 1.09
HOXB3-204ENST00000465120 CRB1P82279 1406 aa21.88■■□□□ 1.09
HOXB3-204ENST00000465120 EZH2Q15910 746 aaKnown RBP21.87■■□□□ 1.09
HOXB3-204ENST00000465120 AKAP12Q02952 1782 aa21.87■■□□□ 1.09
HOXB3-204ENST00000465120 CSB-PGBD3P0DP91 1061 aa21.85■■□□□ 1.09
HOXB3-204ENST00000465120 AXIN2Q9Y2T1 843 aa21.85■■□□□ 1.09
HOXB3-204ENST00000465120 CPSF1Q10570 1443 aaKnown RBP21.85■■□□□ 1.09
HOXB3-204ENST00000465120 SBNO2Q9Y2G9 1366 aa21.85■■□□□ 1.09
HOXB3-204ENST00000465120 HDGFL2Q7Z4V5 671 aaPredicted RBP21.84■■□□□ 1.09
HOXB3-204ENST00000465120 ARHGEF25Q86VW2 580 aa21.84■■□□□ 1.09
HOXB3-204ENST00000465120 TNS1Q9HBL0 1735 aaKnown RBP21.83■■□□□ 1.08
HOXB3-204ENST00000465120 R3HDM1Q15032 1099 aaKnown RBP21.82■■□□□ 1.08
HOXB3-204ENST00000465120 DDB1Q16531 1140 aa21.82■■□□□ 1.08
HOXB3-204ENST00000465120 SLC12A5Q9H2X9 1139 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms