RNA–Protein interactions for RNA: ENST00000464940.1

KPNA1-202, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-202ENST00000464940 GOPCQ9HD26 462 aa10.69□□□□□ -0.7
KPNA1-202ENST00000464940 LCE2CQ5TA81 110 aa10.68□□□□□ -0.7
KPNA1-202ENST00000464940 KIFC2Q96AC6 838 aa10.68□□□□□ -0.7
KPNA1-202ENST00000464940 CC2D2AQ9P2K1 1620 aa10.67□□□□□ -0.7
KPNA1-202ENST00000464940 HOXA2O43364 376 aa10.67□□□□□ -0.7
KPNA1-202ENST00000464940 HRCP23327 699 aa10.67□□□□□ -0.7
KPNA1-202ENST00000464940 ARID3CA6NKF2 412 aa10.66□□□□□ -0.7
KPNA1-202ENST00000464940 HPS1Q92902 700 aa10.66□□□□□ -0.7
KPNA1-202ENST00000464940 EIF4G1Q04637 1599 aaKnown RBP10.65□□□□□ -0.7
KPNA1-202ENST00000464940 GJA5P36382 358 aa10.65□□□□□ -0.7
KPNA1-202ENST00000464940 USB1Q9BQ65 265 aaKnown RBP10.65□□□□□ -0.7
KPNA1-202ENST00000464940 MOXD2PA6NHM9 499 aa10.64□□□□□ -0.71
KPNA1-202ENST00000464940 DXOO77932 396 aaKnown RBP10.64□□□□□ -0.71
KPNA1-202ENST00000464940 MYSM1Q5VVJ2 828 aa10.64□□□□□ -0.71
KPNA1-202ENST00000464940 NDUFV2P19404 249 aa10.63□□□□□ -0.71
KPNA1-202ENST00000464940 SPTLC1O15269 473 aa10.62□□□□□ -0.71
KPNA1-202ENST00000464940 SKIV2LQ15477 1246 aaKnown RBP10.62□□□□□ -0.71
KPNA1-202ENST00000464940 RC3H1Q5TC82 1133 aaKnown RBP10.62□□□□□ -0.71
KPNA1-202ENST00000464940 RIC3Q7Z5B4 369 aa10.62□□□□□ -0.71
KPNA1-202ENST00000464940 CECR2Q9BXF3 1484 aa10.61□□□□□ -0.71
KPNA1-202ENST00000464940 A6NJR5 290 aa10.61□□□□□ -0.71
KPNA1-202ENST00000464940 FDX1P10109 184 aa10.61□□□□□ -0.71
KPNA1-202ENST00000464940 WNT7BP56706 349 aa10.61□□□□□ -0.71
KPNA1-202ENST00000464940 RSBN1LQ6PCB5 846 aaPredicted RBP10.61□□□□□ -0.71
KPNA1-202ENST00000464940 CCDC24Q8N4L8 307 aa10.61□□□□□ -0.71
KPNA1-202ENST00000464940 HLA-CQ95604 372 aa10.61□□□□□ -0.71
KPNA1-202ENST00000464940 PCMTD1Q96MG8 357 aaPredicted RBP10.61□□□□□ -0.71
KPNA1-202ENST00000464940 SKOR1P84550 965 aa10.6□□□□□ -0.71
KPNA1-202ENST00000464940 TUSC1Q2TAM9 212 aa10.6□□□□□ -0.71
KPNA1-202ENST00000464940 SH3D19Q5HYK7 790 aa10.6□□□□□ -0.71
KPNA1-202ENST00000464940 GUCA2AQ02747 115 aa10.59□□□□□ -0.71
KPNA1-202ENST00000464940 SLC16A10Q8TF71 515 aa10.59□□□□□ -0.71
KPNA1-202ENST00000464940 POLR3EQ9NVU0 708 aa10.59□□□□□ -0.71
KPNA1-202ENST00000464940 PCDHGC3Q9UN70 934 aa10.59□□□□□ -0.71
KPNA1-202ENST00000464940 PDIA4P13667 645 aaKnown RBP10.58□□□□□ -0.72
KPNA1-202ENST00000464940 FAM181BA6NEQ2 426 aa10.57□□□□□ -0.72
KPNA1-202ENST00000464940 TRAK2O60296 914 aa10.57□□□□□ -0.72
KPNA1-202ENST00000464940 LIMD1Q9UGP4 676 aa10.57□□□□□ -0.72
KPNA1-202ENST00000464940 PCDHB15Q9Y5E8 787 aa10.57□□□□□ -0.72
KPNA1-202ENST00000464940 ALDH1A1P00352 501 aa10.56□□□□□ -0.72
KPNA1-202ENST00000464940 CLK2P49760 499 aaKnown RBP10.56□□□□□ -0.72
KPNA1-202ENST00000464940 NXF1Q9UBU9 619 aaKnown RBP10.56□□□□□ -0.72
KPNA1-202ENST00000464940 PRPF38BQ5VTL8 546 aaKnown RBP10.55□□□□□ -0.72
KPNA1-202ENST00000464940 NPM2Q86SE8 214 aaKnown RBP10.54□□□□□ -0.72
KPNA1-202ENST00000464940 PROCA1Q8NCQ7 364 aaPredicted RBP10.54□□□□□ -0.72
KPNA1-202ENST00000464940 CLUAP1Q96AJ1 413 aa10.54□□□□□ -0.72
KPNA1-202ENST00000464940 ZBTB7CA1YPR0 619 aa10.53□□□□□ -0.72
KPNA1-202ENST00000464940 SPDYE5A6NIY4 337 aa10.53□□□□□ -0.72
KPNA1-202ENST00000464940 NPAS3Q8IXF0 933 aa10.53□□□□□ -0.72
KPNA1-202ENST00000464940 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.53□□□□□ -0.72
KPNA1-202ENST00000464940 LILRB3O75022 631 aa10.52□□□□□ -0.73
KPNA1-202ENST00000464940 MTMR2Q13614 643 aa10.52□□□□□ -0.73
KPNA1-202ENST00000464940 SYMPKQ92797 1274 aaKnown RBP10.52□□□□□ -0.73
KPNA1-202ENST00000464940 C6orf229H3BNL8 230 aa10.51□□□□□ -0.73
KPNA1-202ENST00000464940 JUNDP17535 347 aa10.51□□□□□ -0.73
KPNA1-202ENST00000464940 GMPRP36959 345 aa10.51□□□□□ -0.73
KPNA1-202ENST00000464940 RETREG3Q86VR2 466 aa10.51□□□□□ -0.73
KPNA1-202ENST00000464940 CCDC82Q8N4S0 544 aa10.51□□□□□ -0.73
KPNA1-202ENST00000464940 IRF7Q92985 503 aa10.51□□□□□ -0.73
KPNA1-202ENST00000464940 ZBTB3Q9H5J0 574 aa10.51□□□□□ -0.73
KPNA1-202ENST00000464940 SIAH2O43255 324 aa10.5□□□□□ -0.73
KPNA1-202ENST00000464940 BMP1P13497 986 aa10.49□□□□□ -0.73
KPNA1-202ENST00000464940 CSPP1Q1MSJ5 1256 aa10.49□□□□□ -0.73
KPNA1-202ENST00000464940 TRIM46Q7Z4K8 759 aa10.49□□□□□ -0.73
KPNA1-202ENST00000464940 ZSCAN1Q8NBB4 408 aa10.49□□□□□ -0.73
KPNA1-202ENST00000464940 ATP1B4Q9UN42 357 aaPredicted RBP10.49□□□□□ -0.73
KPNA1-202ENST00000464940 NUTM2BA6NNL0 878 aaPredicted RBP10.48□□□□□ -0.73
KPNA1-202ENST00000464940 NUTM2EB1AL46 878 aaPredicted RBP10.48□□□□□ -0.73
KPNA1-202ENST00000464940 CAPN5O15484 640 aaPredicted RBP10.48□□□□□ -0.73
KPNA1-202ENST00000464940 QPCTQ16769 361 aa10.48□□□□□ -0.73
KPNA1-202ENST00000464940 NUTM2DQ5VT03 806 aaPredicted RBP10.48□□□□□ -0.73
KPNA1-202ENST00000464940 PPP2R2DQ66LE6 453 aa10.48□□□□□ -0.73
KPNA1-202ENST00000464940 NUTM2AQ8IVF1 878 aaPredicted RBP10.48□□□□□ -0.73
KPNA1-202ENST00000464940 EHBP1Q8NDI1 1231 aa10.48□□□□□ -0.73
KPNA1-202ENST00000464940 WASF2Q9Y6W5 498 aa10.48□□□□□ -0.73
KPNA1-202ENST00000464940 LORP23490 312 aaPredicted RBP10.47□□□□□ -0.73
KPNA1-202ENST00000464940 MCM6Q14566 821 aa10.47□□□□□ -0.73
KPNA1-202ENST00000464940 CABLES1Q8TDN4 633 aa10.47□□□□□ -0.73
KPNA1-202ENST00000464940 NUDT12Q9BQG2 462 aa10.47□□□□□ -0.73
KPNA1-202ENST00000464940 RTL5Q5HYW3 569 aaPredicted RBP10.46□□□□□ -0.73
KPNA1-202ENST00000464940 DESI1Q6ICB0 168 aa10.45□□□□□ -0.74
KPNA1-202ENST00000464940 PTCRAQ6ISU1 281 aaPredicted RBP10.45□□□□□ -0.74
KPNA1-202ENST00000464940 PRR7Q8TB68 274 aa10.45□□□□□ -0.74
KPNA1-202ENST00000464940 H3BM21 787 aa10.44□□□□□ -0.74
KPNA1-202ENST00000464940 CCDC9Q9Y3X0 531 aaKnown RBP10.44□□□□□ -0.74
KPNA1-202ENST00000464940 RAD21O60216 631 aa10.43□□□□□ -0.74
KPNA1-202ENST00000464940 VEGFBP49765 207 aa10.43□□□□□ -0.74
KPNA1-202ENST00000464940 FBXO31Q5XUX0 539 aaPredicted RBP10.43□□□□□ -0.74
KPNA1-202ENST00000464940 PROSER2Q86WR7 435 aaPredicted RBP10.43□□□□□ -0.74
KPNA1-202ENST00000464940 ZNF777Q9ULD5 760 aaPredicted RBP10.43□□□□□ -0.74
KPNA1-202ENST00000464940 CFAP99D6REC4 459 aa10.41□□□□□ -0.74
KPNA1-202ENST00000464940 SH3BP2P78314 561 aa10.41□□□□□ -0.74
KPNA1-202ENST00000464940 SERPINA10Q9UK55 444 aa10.4□□□□□ -0.74
KPNA1-202ENST00000464940 ERBB4Q15303 1308 aa10.39□□□□□ -0.75
KPNA1-202ENST00000464940 RFC5P40937 340 aa10.39□□□□□ -0.75
KPNA1-202ENST00000464940 CCDC97Q96F63 343 aaPredicted RBP10.39□□□□□ -0.75
KPNA1-202ENST00000464940 ZFP42Q96MM3 310 aa10.39□□□□□ -0.75
KPNA1-202ENST00000464940 CCNYL3P0C7X3 344 aa10.38□□□□□ -0.75
KPNA1-202ENST00000464940 LYPD8Q6UX82 237 aa10.38□□□□□ -0.75
KPNA1-202ENST00000464940 TMEM259Q4ZIN3 620 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms