RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-205ENST00000464870 LRP6O75581 1613 aa17.03■□□□□ 0.32
PTPN7-205ENST00000464870 ZNF692Q9BU19 519 aaPredicted RBP17.03■□□□□ 0.32
PTPN7-205ENST00000464870 ITSN1Q15811 1721 aa17.03■□□□□ 0.32
PTPN7-205ENST00000464870 PLEKHG5O94827 1062 aa17.02■□□□□ 0.32
PTPN7-205ENST00000464870 TMC1Q8TDI8 760 aa17.02■□□□□ 0.32
PTPN7-205ENST00000464870 C8orf37Q96NL8 207 aa17.01■□□□□ 0.31
PTPN7-205ENST00000464870 BRD4O60885 1362 aaPredicted RBP17.01■□□□□ 0.31
PTPN7-205ENST00000464870 CABLES1Q8TDN4 633 aa17■□□□□ 0.31
PTPN7-205ENST00000464870 NGLY1Q96IV0 654 aa17■□□□□ 0.31
PTPN7-205ENST00000464870 TOPAZ1Q8N9V7 1692 aa17■□□□□ 0.31
PTPN7-205ENST00000464870 ZNF772Q68DY9 489 aaPredicted RBP16.99■□□□□ 0.31
PTPN7-205ENST00000464870 HDGFL2Q7Z4V5 671 aaPredicted RBP16.99■□□□□ 0.31
PTPN7-205ENST00000464870 ABTB2Q8N961 1025 aa16.99■□□□□ 0.31
PTPN7-205ENST00000464870 SLC12A5Q9H2X9 1139 aa16.99■□□□□ 0.31
PTPN7-205ENST00000464870 DIEXFQ68CQ4 756 aaKnown RBP16.98■□□□□ 0.31
PTPN7-205ENST00000464870 TERF2IPQ9NYB0 399 aa16.98■□□□□ 0.31
PTPN7-205ENST00000464870 RGS17Q9UGC6 210 aaPredicted RBP16.98■□□□□ 0.31
PTPN7-205ENST00000464870 COL22A1Q8NFW1 1626 aaPredicted RBP16.98■□□□□ 0.31
PTPN7-205ENST00000464870 USP6P35125 1406 aa16.97■□□□□ 0.31
PTPN7-205ENST00000464870 PANK3Q9H999 370 aa16.97■□□□□ 0.31
PTPN7-205ENST00000464870 AFF2P51816 1311 aa16.96■□□□□ 0.31
PTPN7-205ENST00000464870 NUTM2GQ5VZR2 741 aa16.96■□□□□ 0.31
PTPN7-205ENST00000464870 NLRP13Q86W25 1043 aa16.96■□□□□ 0.31
PTPN7-205ENST00000464870 KTN1Q86UP2 1357 aaKnown RBP16.96■□□□□ 0.31
PTPN7-205ENST00000464870 NINLQ9Y2I6 1382 aa16.96■□□□□ 0.31
PTPN7-205ENST00000464870 CPSF1Q10570 1443 aaKnown RBP16.95■□□□□ 0.3
PTPN7-205ENST00000464870 TRPM3Q9HCF6 1732 aaPredicted RBP16.94■□□□□ 0.3
PTPN7-205ENST00000464870 TTC21BQ7Z4L5 1316 aa16.94■□□□□ 0.3
PTPN7-205ENST00000464870 TTC21AQ8NDW8 1320 aa16.94■□□□□ 0.3
PTPN7-205ENST00000464870 NLRP6P59044 892 aa16.93■□□□□ 0.3
PTPN7-205ENST00000464870 POTEAQ6S8J7 498 aa16.93■□□□□ 0.3
PTPN7-205ENST00000464870 FNBP4Q8N3X1 1017 aaPredicted RBP16.93■□□□□ 0.3
PTPN7-205ENST00000464870 USP21Q9UK80 565 aa16.93■□□□□ 0.3
PTPN7-205ENST00000464870 MYOM1P52179 1685 aa16.92■□□□□ 0.3
PTPN7-205ENST00000464870 ILDR2Q71H61 639 aa16.92■□□□□ 0.3
PTPN7-205ENST00000464870 SSH2Q76I76 1423 aa16.91■□□□□ 0.3
PTPN7-205ENST00000464870 QTRT2Q9H974 415 aaKnown RBP16.91■□□□□ 0.3
PTPN7-205ENST00000464870 ALS2Q96Q42 1657 aa16.91■□□□□ 0.3
PTPN7-205ENST00000464870 CNGB1Q14028 1251 aaPredicted RBP16.9■□□□□ 0.3
PTPN7-205ENST00000464870 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.9■□□□□ 0.3
PTPN7-205ENST00000464870 CARD14Q9BXL6 1004 aa16.9■□□□□ 0.3
PTPN7-205ENST00000464870 PER1O15534 1290 aaPredicted RBP16.89■□□□□ 0.29
PTPN7-205ENST00000464870 PRDM11Q9NQV5 511 aa16.89■□□□□ 0.29
PTPN7-205ENST00000464870 USP19O94966 1318 aa16.89■□□□□ 0.29
PTPN7-205ENST00000464870 A0A1W2PP64 1363 aa16.89■□□□□ 0.29
PTPN7-205ENST00000464870 CD163L1Q9NR16 1453 aa16.88■□□□□ 0.29
PTPN7-205ENST00000464870 FAM83GA6ND36 823 aa16.88■□□□□ 0.29
PTPN7-205ENST00000464870 GCP02774 474 aa16.88■□□□□ 0.29
PTPN7-205ENST00000464870 ZC3H6P61129 1189 aaKnown RBP16.88■□□□□ 0.29
PTPN7-205ENST00000464870 TRPC5Q9UL62 973 aaPredicted RBP16.88■□□□□ 0.29
PTPN7-205ENST00000464870 EDC4Q6P2E9 1401 aaKnown RBP16.87■□□□□ 0.29
PTPN7-205ENST00000464870 RXRBP28702 533 aa16.87■□□□□ 0.29
PTPN7-205ENST00000464870 ANKRD36BQ8N2N9 1353 aa16.87■□□□□ 0.29
PTPN7-205ENST00000464870 UNC5CLQ8IV45 518 aa16.86■□□□□ 0.29
PTPN7-205ENST00000464870 NME9Q86XW9 330 aa16.85■□□□□ 0.29
PTPN7-205ENST00000464870 KCNH5Q8NCM2 988 aa16.85■□□□□ 0.29
PTPN7-205ENST00000464870 KIAA0232Q92628 1395 aa16.85■□□□□ 0.29
PTPN7-205ENST00000464870 RBM6P78332 1123 aaKnown RBP16.84■□□□□ 0.29
PTPN7-205ENST00000464870 BTG4Q9NY30 223 aa16.84■□□□□ 0.29
PTPN7-205ENST00000464870 KNSTRNQ9Y448 316 aa16.84■□□□□ 0.29
PTPN7-205ENST00000464870 SLIT2O94813 1529 aa16.84■□□□□ 0.29
PTPN7-205ENST00000464870 CHRNA2Q15822 529 aa16.83■□□□□ 0.28
PTPN7-205ENST00000464870 BCL9LQ86UU0 1499 aa16.83■□□□□ 0.28
PTPN7-205ENST00000464870 NSD3Q9BZ95 1437 aa16.83■□□□□ 0.28
PTPN7-205ENST00000464870 AKAP12Q02952 1782 aa16.82■□□□□ 0.28
PTPN7-205ENST00000464870 CPDO75976 1380 aa16.82■□□□□ 0.28
PTPN7-205ENST00000464870 USP31Q70CQ4 1352 aa16.82■□□□□ 0.28
PTPN7-205ENST00000464870 CC2D1BQ5T0F9 858 aaKnown RBP16.82■□□□□ 0.28
PTPN7-205ENST00000464870 MIER1Q8N108 512 aa16.82■□□□□ 0.28
PTPN7-205ENST00000464870 ZRANB1Q9UGI0 708 aa16.82■□□□□ 0.28
PTPN7-205ENST00000464870 ZBTB7CA1YPR0 619 aa16.81■□□□□ 0.28
PTPN7-205ENST00000464870 SOX12O15370 315 aa16.81■□□□□ 0.28
PTPN7-205ENST00000464870 AMER1Q5JTC6 1135 aaPredicted RBP16.81■□□□□ 0.28
PTPN7-205ENST00000464870 CCDC9Q9Y3X0 531 aaKnown RBP16.81■□□□□ 0.28
PTPN7-205ENST00000464870 ATRNO75882 1429 aa16.8■□□□□ 0.28
PTPN7-205ENST00000464870 ABCA3Q99758 1704 aa16.8■□□□□ 0.28
PTPN7-205ENST00000464870 ANP32CO43423 234 aa16.8■□□□□ 0.28
PTPN7-205ENST00000464870 VPS72Q15906 364 aa16.8■□□□□ 0.28
PTPN7-205ENST00000464870 COG3Q96JB2 828 aa16.8■□□□□ 0.28
PTPN7-205ENST00000464870 GJD4Q96KN9 370 aaPredicted RBP16.8■□□□□ 0.28
PTPN7-205ENST00000464870 MON2Q7Z3U7 1717 aa16.79■□□□□ 0.28
PTPN7-205ENST00000464870 EVA1CP58658 441 aa16.79■□□□□ 0.28
PTPN7-205ENST00000464870 NRKQ7Z2Y5 1582 aa16.79■□□□□ 0.28
PTPN7-205ENST00000464870 MARF1Q9Y4F3 1742 aaKnown RBP16.79■□□□□ 0.28
PTPN7-205ENST00000464870 PIK3C2AO00443 1686 aa16.78■□□□□ 0.28
PTPN7-205ENST00000464870 SLIT3O75094 1523 aa16.78■□□□□ 0.28
PTPN7-205ENST00000464870 PHRF1Q9P1Y6 1649 aaKnown RBP16.78■□□□□ 0.28
PTPN7-205ENST00000464870 CRYBG1Q9Y4K1 1723 aa16.77■□□□□ 0.28
PTPN7-205ENST00000464870 FYB1O15117 783 aa16.77■□□□□ 0.28
PTPN7-205ENST00000464870 ARHGEF25Q86VW2 580 aa16.77■□□□□ 0.28
PTPN7-205ENST00000464870 PRKRIP1Q9H875 184 aaPredicted RBP16.77■□□□□ 0.28
PTPN7-205ENST00000464870 STRN4Q9NRL3 753 aa16.77■□□□□ 0.28
PTPN7-205ENST00000464870 AATKQ6ZMQ8 1374 aa16.77■□□□□ 0.27
PTPN7-205ENST00000464870 GGNBP2Q9H3C7 697 aa16.76■□□□□ 0.27
PTPN7-205ENST00000464870 COL14A1Q05707 1796 aaKnown RBP16.76■□□□□ 0.27
PTPN7-205ENST00000464870 CGNL1Q0VF96 1302 aa16.75■□□□□ 0.27
PTPN7-205ENST00000464870 CDK12Q9NYV4 1490 aaPredicted RBP16.75■□□□□ 0.27
PTPN7-205ENST00000464870 OVOS2A0A0J9YW53 1432 aa16.74■□□□□ 0.27
PTPN7-205ENST00000464870 OVOS2Q6IE36 1432 aa16.74■□□□□ 0.27
PTPN7-205ENST00000464870 SOCS7O14512 581 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms