RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 NBPF14Q5TI25 921 aa17.67■□□□□ 0.42
SCAF8-205ENST00000464628 FAM196AQ6ZSG2 479 aa17.67■□□□□ 0.42
SCAF8-205ENST00000464628 WAPLQ7Z5K2 1190 aa17.67■□□□□ 0.42
SCAF8-205ENST00000464628 PSME1Q06323 249 aa17.64■□□□□ 0.41
SCAF8-205ENST00000464628 PHF8Q9UPP1 1060 aa17.64■□□□□ 0.41
SCAF8-205ENST00000464628 SBF2Q86WG5 1849 aa17.63■□□□□ 0.41
SCAF8-205ENST00000464628 PHRF1Q9P1Y6 1649 aaKnown RBP17.63■□□□□ 0.41
SCAF8-205ENST00000464628 PEAK1Q9H792 1746 aa17.62■□□□□ 0.41
SCAF8-205ENST00000464628 SPATA31A1Q5TZJ5 1347 aa17.62■□□□□ 0.41
SCAF8-205ENST00000464628 LMOD2Q6P5Q4 547 aa17.61■□□□□ 0.41
SCAF8-205ENST00000464628 SHANK3Q9BYB0 1731 aa17.61■□□□□ 0.41
SCAF8-205ENST00000464628 PARP4Q9UKK3 1724 aaKnown RBP17.61■□□□□ 0.41
SCAF8-205ENST00000464628 RPGRIP1LQ68CZ1 1315 aa17.6■□□□□ 0.41
SCAF8-205ENST00000464628 ABCC11Q96J66 1382 aa17.6■□□□□ 0.41
SCAF8-205ENST00000464628 DLC1Q96QB1 1528 aa17.58■□□□□ 0.41
SCAF8-205ENST00000464628 PTGER2P43116 358 aa17.58■□□□□ 0.4
SCAF8-205ENST00000464628 ANO8Q9HCE9 1232 aaPredicted RBP17.58■□□□□ 0.4
SCAF8-205ENST00000464628 APLP2Q06481 763 aa17.57■□□□□ 0.4
SCAF8-205ENST00000464628 PDGFDQ9GZP0 370 aaPredicted RBP17.57■□□□□ 0.4
SCAF8-205ENST00000464628 STK26Q9P289 416 aa17.57■□□□□ 0.4
SCAF8-205ENST00000464628 GIGYF1O75420 1035 aaPredicted RBP17.54■□□□□ 0.4
SCAF8-205ENST00000464628 YTHDC2Q9H6S0 1430 aaKnown RBP17.54■□□□□ 0.4
SCAF8-205ENST00000464628 ADGRF5Q8IZF2 1346 aa17.53■□□□□ 0.4
SCAF8-205ENST00000464628 SYT17Q9BSW7 474 aa17.53■□□□□ 0.4
SCAF8-205ENST00000464628 FHDC1Q9C0D6 1143 aaPredicted RBP17.53■□□□□ 0.4
SCAF8-205ENST00000464628 ANKARQ7Z5J8 1434 aa17.52■□□□□ 0.4
SCAF8-205ENST00000464628 LMO7Q8WWI1 1683 aa17.52■□□□□ 0.39
SCAF8-205ENST00000464628 ZBTB7AO95365 584 aa17.51■□□□□ 0.39
SCAF8-205ENST00000464628 LRRC37A3O60309 1634 aa17.5■□□□□ 0.39
SCAF8-205ENST00000464628 PIK3C2GO75747 1445 aa17.5■□□□□ 0.39
SCAF8-205ENST00000464628 TMEM132EQ6IEE7 984 aa17.5■□□□□ 0.39
SCAF8-205ENST00000464628 BARGINQ6ZT62 677 aa17.5■□□□□ 0.39
SCAF8-205ENST00000464628 SSH2Q76I76 1423 aa17.49■□□□□ 0.39
SCAF8-205ENST00000464628 PMFBP1Q8TBY8 1022 aa17.49■□□□□ 0.39
SCAF8-205ENST00000464628 PRDM11Q9NQV5 511 aa17.49■□□□□ 0.39
SCAF8-205ENST00000464628 KIAA0232Q92628 1395 aa17.49■□□□□ 0.39
SCAF8-205ENST00000464628 WNK3Q9BYP7 1800 aa17.49■□□□□ 0.39
SCAF8-205ENST00000464628 PDE3BQ13370 1112 aa17.48■□□□□ 0.39
SCAF8-205ENST00000464628 SGIP1Q9BQI5 828 aa17.48■□□□□ 0.39
SCAF8-205ENST00000464628 LOC105371045A0A1W2PR82 267 aa17.47■□□□□ 0.39
SCAF8-205ENST00000464628 GOLGB1Q14789 3259 aaKnown RBP17.47■□□□□ 0.39
SCAF8-205ENST00000464628 MAP3K5Q99683 1374 aa17.46■□□□□ 0.39
SCAF8-205ENST00000464628 SIRT1Q96EB6 747 aa17.46■□□□□ 0.39
SCAF8-205ENST00000464628 STRN4Q9NRL3 753 aa17.46■□□□□ 0.39
SCAF8-205ENST00000464628 ATF5Q9Y2D1 282 aaPredicted RBP17.46■□□□□ 0.39
SCAF8-205ENST00000464628 PLSCR1O15162 318 aa17.45■□□□□ 0.38
SCAF8-205ENST00000464628 OVOS2A0A0G2JMS6 1433 aa17.45■□□□□ 0.38
SCAF8-205ENST00000464628 OVOS2A0A0J9YW53 1432 aa17.45■□□□□ 0.38
SCAF8-205ENST00000464628 OVOS2Q6IE36 1432 aa17.45■□□□□ 0.38
SCAF8-205ENST00000464628 ACIN1Q9UKV3 1341 aaKnown RBP17.45■□□□□ 0.38
SCAF8-205ENST00000464628 CHRNA2Q15822 529 aa17.44■□□□□ 0.38
SCAF8-205ENST00000464628 USP35Q9P2H5 1018 aa17.44■□□□□ 0.38
SCAF8-205ENST00000464628 ATP7BP35670 1465 aa17.44■□□□□ 0.38
SCAF8-205ENST00000464628 AKAP12Q02952 1782 aa17.43■□□□□ 0.38
SCAF8-205ENST00000464628 SPATA31E1Q6ZUB1 1445 aa17.43■□□□□ 0.38
SCAF8-205ENST00000464628 TULP4Q9NRJ4 1543 aa17.42■□□□□ 0.38
SCAF8-205ENST00000464628 ITSN1Q15811 1721 aa17.42■□□□□ 0.38
SCAF8-205ENST00000464628 COL24A1Q17RW2 1714 aa17.42■□□□□ 0.38
SCAF8-205ENST00000464628 PAPPAQ13219 1627 aa17.42■□□□□ 0.38
SCAF8-205ENST00000464628 GPRASP1Q5JY77 1395 aa17.41■□□□□ 0.38
SCAF8-205ENST00000464628 PROM2Q8N271 834 aa17.41■□□□□ 0.38
SCAF8-205ENST00000464628 PRR36Q9H6K5 1346 aa17.4■□□□□ 0.38
SCAF8-205ENST00000464628 DHX57Q6P158 1386 aaKnown RBP17.4■□□□□ 0.38
SCAF8-205ENST00000464628 PTF1AQ7RTS3 328 aa17.39■□□□□ 0.37
SCAF8-205ENST00000464628 MTFR1LQ9H019 292 aa17.39■□□□□ 0.37
SCAF8-205ENST00000464628 ANKRD30BQ9BXX2 1392 aa17.39■□□□□ 0.37
SCAF8-205ENST00000464628 LARP1Q6PKG0 1096 aaKnown RBP17.38■□□□□ 0.37
SCAF8-205ENST00000464628 TCP11L2Q8N4U5 519 aa17.38■□□□□ 0.37
SCAF8-205ENST00000464628 TOPAZ1Q8N9V7 1692 aa17.38■□□□□ 0.37
SCAF8-205ENST00000464628 ITGAEP38570 1179 aa17.37■□□□□ 0.37
SCAF8-205ENST00000464628 BCL11BQ9C0K0 894 aaPredicted RBP17.37■□□□□ 0.37
SCAF8-205ENST00000464628 C11orf95C9JLR9 678 aaPredicted RBP17.36■□□□□ 0.37
SCAF8-205ENST00000464628 PRAM1Q96QH2 718 aa17.36■□□□□ 0.37
SCAF8-205ENST00000464628 SAFB2Q14151 953 aaKnown RBP eCLIP17.35■□□□□ 0.37
SCAF8-205ENST00000464628 SLC15A2Q16348 729 aa17.35■□□□□ 0.37
SCAF8-205ENST00000464628 ARXQ96QS3 562 aa17.35■□□□□ 0.37
SCAF8-205ENST00000464628 THRAP3Q9Y2W1 955 aaKnown RBP17.35■□□□□ 0.37
SCAF8-205ENST00000464628 COL5A2P05997 1499 aaPredicted RBP17.35■□□□□ 0.37
SCAF8-205ENST00000464628 ZC3H6P61129 1189 aaKnown RBP17.34■□□□□ 0.37
SCAF8-205ENST00000464628 QSER1Q2KHR3 1735 aa17.34■□□□□ 0.37
SCAF8-205ENST00000464628 ADRA2BP18089 450 aa17.33■□□□□ 0.36
SCAF8-205ENST00000464628 BCL9O00512 1426 aa17.32■□□□□ 0.36
SCAF8-205ENST00000464628 AATKQ6ZMQ8 1374 aa17.32■□□□□ 0.36
SCAF8-205ENST00000464628 HSPA6P17066 643 aa17.32■□□□□ 0.36
SCAF8-205ENST00000464628 GPR162Q16538 588 aa17.32■□□□□ 0.36
SCAF8-205ENST00000464628 STK32BQ9NY57 414 aa17.32■□□□□ 0.36
SCAF8-205ENST00000464628 CPDO75976 1380 aa17.31■□□□□ 0.36
SCAF8-205ENST00000464628 PAK3O75914 559 aaPredicted RBP17.31■□□□□ 0.36
SCAF8-205ENST00000464628 EVA1CP58658 441 aa17.31■□□□□ 0.36
SCAF8-205ENST00000464628 NHSQ6T4R5 1651 aa17.31■□□□□ 0.36
SCAF8-205ENST00000464628 ADGRB1O14514 1584 aa17.31■□□□□ 0.36
SCAF8-205ENST00000464628 CRB1P82279 1406 aa17.3■□□□□ 0.36
SCAF8-205ENST00000464628 ATP10DQ9P241 1426 aa17.3■□□□□ 0.36
SCAF8-205ENST00000464628 EIF3AQ14152 1382 aaKnown RBP17.3■□□□□ 0.36
SCAF8-205ENST00000464628 TXNRD1Q16881 649 aa17.3■□□□□ 0.36
SCAF8-205ENST00000464628 C14orf93Q9H972 538 aaKnown RBP17.3■□□□□ 0.36
SCAF8-205ENST00000464628 TUBGCP6Q96RT7 1819 aa17.29■□□□□ 0.36
SCAF8-205ENST00000464628 RGL3Q3MIN7 710 aa17.29■□□□□ 0.36
SCAF8-205ENST00000464628 PIAS4Q8N2W9 510 aaPredicted RBP17.29■□□□□ 0.36
SCAF8-205ENST00000464628 NGDNQ8NEJ9 315 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms