RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 RUNDC1Q96C34 613 aa25.81■■□□□ 1.72
POLR2J3-203ENST00000464525 PRR36Q9H6K5 1346 aa25.8■■□□□ 1.72
POLR2J3-203ENST00000464525 PPIP5K1Q6PFW1 1433 aa25.8■■□□□ 1.72
POLR2J3-203ENST00000464525 U2AF1L5P0DN76 240 aaPredicted RBP25.79■■□□□ 1.72
POLR2J3-203ENST00000464525 U2AF1Q01081 240 aaKnown RBP eCLIP25.79■■□□□ 1.72
POLR2J3-203ENST00000464525 E9PSI1 815 aa25.79■■□□□ 1.72
POLR2J3-203ENST00000464525 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.78■■□□□ 1.72
POLR2J3-203ENST00000464525 PTCH1Q13635 1447 aa25.78■■□□□ 1.72
POLR2J3-203ENST00000464525 RBM33Q96EV2 1170 aaKnown RBP25.78■■□□□ 1.72
POLR2J3-203ENST00000464525 XRN1Q8IZH2 1706 aaKnown RBP25.77■■□□□ 1.72
POLR2J3-203ENST00000464525 KDM4FA0A1W2PPD8 638 aa25.77■■□□□ 1.72
POLR2J3-203ENST00000464525 NPHP4O75161 1426 aaPredicted RBP25.77■■□□□ 1.72
POLR2J3-203ENST00000464525 FBLN1P23142 703 aa25.77■■□□□ 1.72
POLR2J3-203ENST00000464525 CCDC61Q9Y6R9 512 aa25.77■■□□□ 1.72
POLR2J3-203ENST00000464525 BCAR3O75815 825 aa25.76■■□□□ 1.71
POLR2J3-203ENST00000464525 NKTRP30414 1462 aaKnown RBP25.76■■□□□ 1.71
POLR2J3-203ENST00000464525 ATP7BP35670 1465 aa25.74■■□□□ 1.71
POLR2J3-203ENST00000464525 PIK3R4Q99570 1358 aa25.74■■□□□ 1.71
POLR2J3-203ENST00000464525 U2SURPO15042 1029 aaKnown RBP25.73■■□□□ 1.71
POLR2J3-203ENST00000464525 NGEFQ8N5V2 710 aa25.73■■□□□ 1.71
POLR2J3-203ENST00000464525 ADGRB2O60241 1585 aa25.73■■□□□ 1.71
POLR2J3-203ENST00000464525 HSPA2P54652 639 aa25.72■■□□□ 1.71
POLR2J3-203ENST00000464525 IQSEC2Q5JU85 1478 aa25.72■■□□□ 1.71
POLR2J3-203ENST00000464525 CHD2O14647 1828 aaKnown RBP25.7■■□□□ 1.71
POLR2J3-203ENST00000464525 CPSF1Q10570 1443 aaKnown RBP25.69■■□□□ 1.7
POLR2J3-203ENST00000464525 PHF23Q9BUL5 403 aaPredicted RBP25.69■■□□□ 1.7
POLR2J3-203ENST00000464525 SKAP1Q86WV1 359 aa25.68■■□□□ 1.7
POLR2J3-203ENST00000464525 ANKRD26Q9UPS8 1709 aa25.67■■□□□ 1.7
POLR2J3-203ENST00000464525 PPM1GO15355 546 aaPredicted RBP25.66■■□□□ 1.7
POLR2J3-203ENST00000464525 MSH5O43196 834 aa25.66■■□□□ 1.7
POLR2J3-203ENST00000464525 CDC42BPGQ6DT37 1551 aa25.66■■□□□ 1.7
POLR2J3-203ENST00000464525 ERICH6Q7L0X2 663 aa25.65■■□□□ 1.7
POLR2J3-203ENST00000464525 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.65■■□□□ 1.7
POLR2J3-203ENST00000464525 COL3A1P02461 1466 aaPredicted RBP25.65■■□□□ 1.7
POLR2J3-203ENST00000464525 ZRANB1Q9UGI0 708 aa25.65■■□□□ 1.7
POLR2J3-203ENST00000464525 PMFBP1Q8TBY8 1022 aa25.64■■□□□ 1.7
POLR2J3-203ENST00000464525 NME9Q86XW9 330 aa25.63■■□□□ 1.69
POLR2J3-203ENST00000464525 ACEP12821 1306 aa25.63■■□□□ 1.69
POLR2J3-203ENST00000464525 FANCIQ9NVI1 1328 aa25.63■■□□□ 1.69
POLR2J3-203ENST00000464525 KIF20BQ96Q89 1820 aa25.63■■□□□ 1.69
POLR2J3-203ENST00000464525 PLEKHF1Q96S99 279 aa25.63■■□□□ 1.69
POLR2J3-203ENST00000464525 RGPD8O14715 1765 aaPredicted RBP25.62■■□□□ 1.69
POLR2J3-203ENST00000464525 EDC4Q6P2E9 1401 aaKnown RBP25.61■■□□□ 1.69
POLR2J3-203ENST00000464525 WDR63Q8IWG1 891 aa25.61■■□□□ 1.69
POLR2J3-203ENST00000464525 DIAPH1O60610 1272 aaKnown RBP25.61■■□□□ 1.69
POLR2J3-203ENST00000464525 TOPAZ1Q8N9V7 1692 aa25.61■■□□□ 1.69
POLR2J3-203ENST00000464525 POLKQ9UBT6 870 aa25.6■■□□□ 1.69
POLR2J3-203ENST00000464525 ITSN1Q15811 1721 aa25.6■■□□□ 1.69
POLR2J3-203ENST00000464525 CCDC27Q2M243 656 aa25.6■■□□□ 1.69
POLR2J3-203ENST00000464525 PLEKHG3A1L390 1219 aa25.59■■□□□ 1.69
POLR2J3-203ENST00000464525 AKAP12Q02952 1782 aa25.58■■□□□ 1.69
POLR2J3-203ENST00000464525 ZNF692Q9BU19 519 aaPredicted RBP25.58■■□□□ 1.69
POLR2J3-203ENST00000464525 MON2Q7Z3U7 1717 aa25.58■■□□□ 1.69
POLR2J3-203ENST00000464525 NALCNQ8IZF0 1738 aa25.58■■□□□ 1.69
POLR2J3-203ENST00000464525 C14orf37Q86TY3 774 aa25.58■■□□□ 1.69
POLR2J3-203ENST00000464525 PNPLA6Q8IY17 1366 aa25.58■■□□□ 1.68
POLR2J3-203ENST00000464525 TMPOP42166 694 aaKnown RBP25.57■■□□□ 1.68
POLR2J3-203ENST00000464525 EMILIN1Q9Y6C2 1016 aa25.57■■□□□ 1.68
POLR2J3-203ENST00000464525 BCL2L13Q9BXK5 485 aa25.56■■□□□ 1.68
POLR2J3-203ENST00000464525 FRAT1Q92837 279 aaPredicted RBP25.55■■□□□ 1.68
POLR2J3-203ENST00000464525 NGDNQ8NEJ9 315 aaKnown RBP25.55■■□□□ 1.68
POLR2J3-203ENST00000464525 TRIM35Q9UPQ4 493 aa25.55■■□□□ 1.68
POLR2J3-203ENST00000464525 MAPK8IP3Q9UPT6 1336 aa25.54■■□□□ 1.68
POLR2J3-203ENST00000464525 RARSP54136 660 aaKnown RBP25.54■■□□□ 1.68
POLR2J3-203ENST00000464525 TSR2Q969E8 191 aaKnown RBP25.54■■□□□ 1.68
POLR2J3-203ENST00000464525 MAP2P11137 1827 aaKnown RBP25.54■■□□□ 1.68
POLR2J3-203ENST00000464525 PANK1Q8TE04 598 aa25.54■■□□□ 1.68
POLR2J3-203ENST00000464525 KDM2BQ8NHM5 1336 aa25.53■■□□□ 1.68
POLR2J3-203ENST00000464525 CANXP27824 592 aaKnown RBP25.53■■□□□ 1.68
POLR2J3-203ENST00000464525 PROSER2Q86WR7 435 aaPredicted RBP25.53■■□□□ 1.68
POLR2J3-203ENST00000464525 TTC21BQ7Z4L5 1316 aa25.52■■□□□ 1.68
POLR2J3-203ENST00000464525 FMN2Q9NZ56 1722 aa25.52■■□□□ 1.68
POLR2J3-203ENST00000464525 USP6P35125 1406 aa25.52■■□□□ 1.68
POLR2J3-203ENST00000464525 LMTK3Q96Q04 1460 aa25.51■■□□□ 1.67
POLR2J3-203ENST00000464525 TCERG1O14776 1098 aaKnown RBP25.51■■□□□ 1.67
POLR2J3-203ENST00000464525 TNNQ9UQP3 1299 aa25.51■■□□□ 1.67
POLR2J3-203ENST00000464525 ADGRL3Q9HAR2 1447 aa25.5■■□□□ 1.67
POLR2J3-203ENST00000464525 RIPK4P57078 832 aa25.5■■□□□ 1.67
POLR2J3-203ENST00000464525 RRS1Q15050 365 aaKnown RBP25.5■■□□□ 1.67
POLR2J3-203ENST00000464525 COG3Q96JB2 828 aa25.5■■□□□ 1.67
POLR2J3-203ENST00000464525 HMOX1P09601 288 aa25.49■■□□□ 1.67
POLR2J3-203ENST00000464525 MYH16Q9H6N6 1097 aa25.49■■□□□ 1.67
POLR2J3-203ENST00000464525 COG6Q9Y2V7 657 aa25.49■■□□□ 1.67
POLR2J3-203ENST00000464525 ANKARQ7Z5J8 1434 aa25.48■■□□□ 1.67
POLR2J3-203ENST00000464525 NWD1Q149M9 1564 aa25.48■■□□□ 1.67
POLR2J3-203ENST00000464525 PRKAR2BP31323 418 aa25.47■■□□□ 1.67
POLR2J3-203ENST00000464525 NCBP3Q53F19 620 aaKnown RBP25.47■■□□□ 1.67
POLR2J3-203ENST00000464525 NRKQ7Z2Y5 1582 aa25.47■■□□□ 1.67
POLR2J3-203ENST00000464525 PDE3AQ14432 1141 aa25.46■■□□□ 1.67
POLR2J3-203ENST00000464525 ANP32EQ9BTT0 268 aa25.45■■□□□ 1.67
POLR2J3-203ENST00000464525 RSPH6AQ9H0K4 717 aa25.45■■□□□ 1.67
POLR2J3-203ENST00000464525 FCHSD2O94868 740 aa25.45■■□□□ 1.66
POLR2J3-203ENST00000464525 CENPQQ7L2Z9 268 aaPredicted RBP25.45■■□□□ 1.66
POLR2J3-203ENST00000464525 PHACTR3Q96KR7 559 aa25.45■■□□□ 1.66
POLR2J3-203ENST00000464525 PDE4AP27815 886 aa25.44■■□□□ 1.66
POLR2J3-203ENST00000464525 EXOSC9Q06265 439 aaKnown RBP25.44■■□□□ 1.66
POLR2J3-203ENST00000464525 RLBP1P12271 317 aa25.44■■□□□ 1.66
POLR2J3-203ENST00000464525 SOX12O15370 315 aa25.43■■□□□ 1.66
POLR2J3-203ENST00000464525 ESCO1Q5FWF5 840 aa25.43■■□□□ 1.66
POLR2J3-203ENST00000464525 LRRC7Q96NW7 1537 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 290.8 ms