RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 TTC21BQ7Z4L5 1316 aa20.82■□□□□ 0.92
GYPC-205ENST00000464053 PHF8Q9UPP1 1060 aa20.82■□□□□ 0.92
GYPC-205ENST00000464053 SSH2Q76I76 1423 aa20.82■□□□□ 0.92
GYPC-205ENST00000464053 ESCO1Q5FWF5 840 aa20.81■□□□□ 0.92
GYPC-205ENST00000464053 ORAI2Q96SN7 254 aa20.8■□□□□ 0.92
GYPC-205ENST00000464053 C1orf167Q5SNV9 1468 aa20.79■□□□□ 0.92
GYPC-205ENST00000464053 ATF3P18847 181 aa20.78■□□□□ 0.92
GYPC-205ENST00000464053 DCCP43146 1447 aa20.78■□□□□ 0.92
GYPC-205ENST00000464053 MST1RQ04912 1400 aa20.78■□□□□ 0.92
GYPC-205ENST00000464053 MSH6P52701 1360 aa20.76■□□□□ 0.91
GYPC-205ENST00000464053 MTHFSP49914 203 aa20.76■□□□□ 0.91
GYPC-205ENST00000464053 FBLN1P23142 703 aa20.75■□□□□ 0.91
GYPC-205ENST00000464053 COG3Q96JB2 828 aa20.74■□□□□ 0.91
GYPC-205ENST00000464053 CADPS2Q86UW7 1296 aa20.74■□□□□ 0.91
GYPC-205ENST00000464053 TTC21AQ8NDW8 1320 aa20.73■□□□□ 0.91
GYPC-205ENST00000464053 PIK3C2AO00443 1686 aa20.73■□□□□ 0.91
GYPC-205ENST00000464053 HNRNPUQ00839 825 aaKnown RBP eCLIP20.73■□□□□ 0.91
GYPC-205ENST00000464053 OVOS2A0A0J9YW53 1432 aa20.72■□□□□ 0.91
GYPC-205ENST00000464053 OVOS2Q6IE36 1432 aa20.72■□□□□ 0.91
GYPC-205ENST00000464053 FOXO3O43524 673 aa20.71■□□□□ 0.91
GYPC-205ENST00000464053 MAP2P11137 1827 aaKnown RBP20.71■□□□□ 0.91
GYPC-205ENST00000464053 KIF1AQ12756 1690 aa20.71■□□□□ 0.91
GYPC-205ENST00000464053 CENPBP07199 599 aaPredicted RBP20.71■□□□□ 0.91
GYPC-205ENST00000464053 SCAF1Q9H7N4 1312 aaKnown RBP20.71■□□□□ 0.91
GYPC-205ENST00000464053 PSME1Q06323 249 aa20.7■□□□□ 0.9
GYPC-205ENST00000464053 PAK3O75914 559 aaPredicted RBP20.69■□□□□ 0.9
GYPC-205ENST00000464053 ADAMTS8Q9UP79 889 aa20.69■□□□□ 0.9
GYPC-205ENST00000464053 SHPRHQ149N8 1683 aa20.69■□□□□ 0.9
GYPC-205ENST00000464053 XPCQ01831 940 aaPredicted RBP20.69■□□□□ 0.9
GYPC-205ENST00000464053 POLKQ9UBT6 870 aa20.68■□□□□ 0.9
GYPC-205ENST00000464053 MARF1Q9Y4F3 1742 aaKnown RBP20.68■□□□□ 0.9
GYPC-205ENST00000464053 SENP3-EIF4A1A0A087X0R7 540 aa20.67■□□□□ 0.9
GYPC-205ENST00000464053 NUTM2GQ5VZR2 741 aa20.67■□□□□ 0.9
GYPC-205ENST00000464053 USP31Q70CQ4 1352 aa20.67■□□□□ 0.9
GYPC-205ENST00000464053 WDR43Q15061 677 aaKnown RBP eCLIP20.67■□□□□ 0.9
GYPC-205ENST00000464053 AATKQ6ZMQ8 1374 aa20.67■□□□□ 0.9
GYPC-205ENST00000464053 LTBP4Q8N2S1 1624 aa20.66■□□□□ 0.9
GYPC-205ENST00000464053 ABTB2Q8N961 1025 aa20.66■□□□□ 0.9
GYPC-205ENST00000464053 DDX17Q92841 729 aaKnown RBP20.65■□□□□ 0.9
GYPC-205ENST00000464053 CFAP53Q96M91 514 aa20.65■□□□□ 0.9
GYPC-205ENST00000464053 EMILIN1Q9Y6C2 1016 aa20.65■□□□□ 0.9
GYPC-205ENST00000464053 TRPM3Q9HCF6 1732 aaPredicted RBP20.65■□□□□ 0.9
GYPC-205ENST00000464053 COL3A1P02461 1466 aaPredicted RBP20.65■□□□□ 0.9
GYPC-205ENST00000464053 NLRP6P59044 892 aa20.64■□□□□ 0.9
GYPC-205ENST00000464053 RRS1Q15050 365 aaKnown RBP20.64■□□□□ 0.9
GYPC-205ENST00000464053 USP54Q70EL1 1684 aa20.64■□□□□ 0.89
GYPC-205ENST00000464053 PPM1GO15355 546 aaPredicted RBP20.64■□□□□ 0.89
GYPC-205ENST00000464053 KRT28Q7Z3Y7 464 aa20.64■□□□□ 0.89
GYPC-205ENST00000464053 BLMP54132 1417 aaPredicted RBP20.63■□□□□ 0.89
GYPC-205ENST00000464053 SLAIN2Q9P270 581 aa20.63■□□□□ 0.89
GYPC-205ENST00000464053 PNPLA6Q8IY17 1366 aa20.63■□□□□ 0.89
GYPC-205ENST00000464053 SOX12O15370 315 aa20.62■□□□□ 0.89
GYPC-205ENST00000464053 SMG6Q86US8 1419 aaKnown RBP20.62■□□□□ 0.89
GYPC-205ENST00000464053 AEBP2Q6ZN18 517 aaPredicted RBP20.62■□□□□ 0.89
GYPC-205ENST00000464053 BRINP3Q76B58 766 aa20.62■□□□□ 0.89
GYPC-205ENST00000464053 INSRP06213 1382 aa20.61■□□□□ 0.89
GYPC-205ENST00000464053 ZBED9Q6R2W3 1325 aa20.58■□□□□ 0.89
GYPC-205ENST00000464053 PEAK1Q9H792 1746 aa20.58■□□□□ 0.89
GYPC-205ENST00000464053 CDK12Q9NYV4 1490 aaPredicted RBP20.58■□□□□ 0.89
GYPC-205ENST00000464053 NPHP3Q7Z494 1330 aa20.57■□□□□ 0.88
GYPC-205ENST00000464053 ALS2Q96Q42 1657 aa20.57■□□□□ 0.88
GYPC-205ENST00000464053 CCDC146Q8IYE0 955 aa20.57■□□□□ 0.88
GYPC-205ENST00000464053 PXDNQ92626 1479 aa20.56■□□□□ 0.88
GYPC-205ENST00000464053 DIAPH1O60610 1272 aaKnown RBP20.56■□□□□ 0.88
GYPC-205ENST00000464053 LMOD2Q6P5Q4 547 aa20.55■□□□□ 0.88
GYPC-205ENST00000464053 MAP3K19Q56UN5 1328 aa20.55■□□□□ 0.88
GYPC-205ENST00000464053 U2SURPO15042 1029 aaKnown RBP20.53■□□□□ 0.88
GYPC-205ENST00000464053 U2AF1L5P0DN76 240 aaPredicted RBP20.53■□□□□ 0.88
GYPC-205ENST00000464053 U2AF1Q01081 240 aaKnown RBP eCLIP20.53■□□□□ 0.88
GYPC-205ENST00000464053 NUDCQ9Y266 331 aa20.53■□□□□ 0.88
GYPC-205ENST00000464053 SALL2Q9Y467 1007 aaPredicted RBP20.53■□□□□ 0.88
GYPC-205ENST00000464053 SBNO1A3KN83 1393 aa20.53■□□□□ 0.88
GYPC-205ENST00000464053 PLEKHG5O94827 1062 aa20.53■□□□□ 0.88
GYPC-205ENST00000464053 NFAT5O94916 1531 aa20.52■□□□□ 0.88
GYPC-205ENST00000464053 IL13P35225 146 aa20.52■□□□□ 0.88
GYPC-205ENST00000464053 HSP90AB2PQ58FF8 381 aa20.5■□□□□ 0.87
GYPC-205ENST00000464053 SLIT3O75094 1523 aa20.5■□□□□ 0.87
GYPC-205ENST00000464053 LTN1O94822 1766 aa20.5■□□□□ 0.87
GYPC-205ENST00000464053 USP19O94966 1318 aa20.5■□□□□ 0.87
GYPC-205ENST00000464053 TNS3Q68CZ2 1445 aa20.5■□□□□ 0.87
GYPC-205ENST00000464053 NHSL1Q5SYE7 1610 aa20.48■□□□□ 0.87
GYPC-205ENST00000464053 MED1Q15648 1581 aaPredicted RBP20.48■□□□□ 0.87
GYPC-205ENST00000464053 SOS2Q07890 1332 aaPredicted RBP20.48■□□□□ 0.87
GYPC-205ENST00000464053 SPATA31A3Q5VYP0 1347 aa20.48■□□□□ 0.87
GYPC-205ENST00000464053 FLT4P35916 1363 aa20.48■□□□□ 0.87
GYPC-205ENST00000464053 APAF1O14727 1248 aa20.48■□□□□ 0.87
GYPC-205ENST00000464053 AMPHP49418 695 aa20.48■□□□□ 0.87
GYPC-205ENST00000464053 EIF4A2Q14240 407 aaKnown RBP20.48■□□□□ 0.87
GYPC-205ENST00000464053 GCP02774 474 aa20.47■□□□□ 0.87
GYPC-205ENST00000464053 KCNH5Q8NCM2 988 aa20.47■□□□□ 0.87
GYPC-205ENST00000464053 RUNDC1Q96C34 613 aa20.47■□□□□ 0.87
GYPC-205ENST00000464053 ROBO1Q9Y6N7 1651 aa20.46■□□□□ 0.87
GYPC-205ENST00000464053 HOXC9P31274 260 aa20.46■□□□□ 0.87
GYPC-205ENST00000464053 PLEKHF1Q96S99 279 aa20.45■□□□□ 0.86
GYPC-205ENST00000464053 IQSEC2Q5JU85 1478 aa20.44■□□□□ 0.86
GYPC-205ENST00000464053 PHRF1Q9P1Y6 1649 aaKnown RBP20.44■□□□□ 0.86
GYPC-205ENST00000464053 HMOX1P09601 288 aa20.43■□□□□ 0.86
GYPC-205ENST00000464053 CRYBG1Q9Y4K1 1723 aa20.43■□□□□ 0.86
GYPC-205ENST00000464053 KIF24Q5T7B8 1368 aa20.43■□□□□ 0.86
GYPC-205ENST00000464053 CABLES1Q8TDN4 633 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms