RNA–Protein interactions for RNA: ENST00000464050.5

COMMD6-207, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 790 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-207ENST00000464050 ABCA3Q99758 1704 aa19.2■□□□□ 0.66
COMMD6-207ENST00000464050 ALS2Q96Q42 1657 aa19.19■□□□□ 0.66
COMMD6-207ENST00000464050 PLEKHG3A1L390 1219 aa19.18■□□□□ 0.66
COMMD6-207ENST00000464050 POLR3AO14802 1390 aaPredicted RBP19.18■□□□□ 0.66
COMMD6-207ENST00000464050 BCL9LQ86UU0 1499 aa19.17■□□□□ 0.66
COMMD6-207ENST00000464050 PCGF6Q9BYE7 350 aa19.17■□□□□ 0.66
COMMD6-207ENST00000464050 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.17■□□□□ 0.66
COMMD6-207ENST00000464050 RALGAPBQ86X10 1494 aa19.16■□□□□ 0.66
COMMD6-207ENST00000464050 SLIT2O94813 1529 aa19.16■□□□□ 0.66
COMMD6-207ENST00000464050 NUTM2GQ5VZR2 741 aa19.16■□□□□ 0.66
COMMD6-207ENST00000464050 GJD4Q96KN9 370 aaPredicted RBP19.16■□□□□ 0.66
COMMD6-207ENST00000464050 PLCH1Q4KWH8 1693 aa19.15■□□□□ 0.66
COMMD6-207ENST00000464050 PRDM11Q9NQV5 511 aa19.15■□□□□ 0.66
COMMD6-207ENST00000464050 ABTB2Q8N961 1025 aa19.14■□□□□ 0.65
COMMD6-207ENST00000464050 CABP1Q9NZU7 370 aa19.14■□□□□ 0.65
COMMD6-207ENST00000464050 NWD2Q9ULI1 1742 aa19.14■□□□□ 0.65
COMMD6-207ENST00000464050 ATAD2Q6PL18 1390 aa19.12■□□□□ 0.65
COMMD6-207ENST00000464050 A0A0G2JS52 829 aa19.12■□□□□ 0.65
COMMD6-207ENST00000464050 FAM83GA6ND36 823 aa19.12■□□□□ 0.65
COMMD6-207ENST00000464050 MYT1Q01538 1121 aa19.12■□□□□ 0.65
COMMD6-207ENST00000464050 UPF1Q92900 1129 aaKnown RBP eCLIP19.11■□□□□ 0.65
COMMD6-207ENST00000464050 BTG4Q9NY30 223 aa19.11■□□□□ 0.65
COMMD6-207ENST00000464050 COL14A1Q05707 1796 aaKnown RBP19.11■□□□□ 0.65
COMMD6-207ENST00000464050 BRD4O60885 1362 aaPredicted RBP19.1■□□□□ 0.65
COMMD6-207ENST00000464050 VPS72Q15906 364 aa19.1■□□□□ 0.65
COMMD6-207ENST00000464050 NLRP13Q86W25 1043 aa19.1■□□□□ 0.65
COMMD6-207ENST00000464050 ZC3H6P61129 1189 aaKnown RBP19.08■□□□□ 0.64
COMMD6-207ENST00000464050 USP6P35125 1406 aa19.08■□□□□ 0.64
COMMD6-207ENST00000464050 KIAA0232Q92628 1395 aa19.07■□□□□ 0.64
COMMD6-207ENST00000464050 PHRF1Q9P1Y6 1649 aaKnown RBP19.07■□□□□ 0.64
COMMD6-207ENST00000464050 SBNO2Q9Y2G9 1366 aa19.07■□□□□ 0.64
COMMD6-207ENST00000464050 CRYBG1Q9Y4K1 1723 aa19.06■□□□□ 0.64
COMMD6-207ENST00000464050 ZBTB7CA1YPR0 619 aa19.06■□□□□ 0.64
COMMD6-207ENST00000464050 TMC1Q8TDI8 760 aa19.06■□□□□ 0.64
COMMD6-207ENST00000464050 ZNF692Q9BU19 519 aaPredicted RBP19.06■□□□□ 0.64
COMMD6-207ENST00000464050 GLI3P10071 1580 aa19.06■□□□□ 0.64
COMMD6-207ENST00000464050 NLRP6P59044 892 aa19.05■□□□□ 0.64
COMMD6-207ENST00000464050 CHRNA2Q15822 529 aa19.05■□□□□ 0.64
COMMD6-207ENST00000464050 CLSPNQ9HAW4 1339 aa19.04■□□□□ 0.64
COMMD6-207ENST00000464050 STRN4Q9NRL3 753 aa19.04■□□□□ 0.64
COMMD6-207ENST00000464050 NRAPQ86VF7 1730 aa19.03■□□□□ 0.64
COMMD6-207ENST00000464050 EVA1CP58658 441 aa19.03■□□□□ 0.64
COMMD6-207ENST00000464050 SEPT12Q8IYM1 358 aa19.03■□□□□ 0.64
COMMD6-207ENST00000464050 CCER1Q8TC90 406 aaPredicted RBP19.03■□□□□ 0.64
COMMD6-207ENST00000464050 USP19O94966 1318 aa19.02■□□□□ 0.64
COMMD6-207ENST00000464050 SLC24A1O60721 1099 aa19.02■□□□□ 0.64
COMMD6-207ENST00000464050 KTN1Q86UP2 1357 aaKnown RBP19.02■□□□□ 0.64
COMMD6-207ENST00000464050 NRKQ7Z2Y5 1582 aa19.02■□□□□ 0.63
COMMD6-207ENST00000464050 FAM98CQ17RN3 349 aaKnown RBP19.01■□□□□ 0.63
COMMD6-207ENST00000464050 HDGFL2Q7Z4V5 671 aaPredicted RBP19.01■□□□□ 0.63
COMMD6-207ENST00000464050 GCP02774 474 aa19■□□□□ 0.63
COMMD6-207ENST00000464050 TIMELESSQ9UNS1 1208 aa19■□□□□ 0.63
COMMD6-207ENST00000464050 AKAP12Q02952 1782 aa19■□□□□ 0.63
COMMD6-207ENST00000464050 TTC21BQ7Z4L5 1316 aa19■□□□□ 0.63
COMMD6-207ENST00000464050 TTC21AQ8NDW8 1320 aa19■□□□□ 0.63
COMMD6-207ENST00000464050 ST20-MTHFSA0A0A6YYL1 179 aa18.99■□□□□ 0.63
COMMD6-207ENST00000464050 CPDO75976 1380 aa18.98■□□□□ 0.63
COMMD6-207ENST00000464050 TERF2IPQ9NYB0 399 aa18.98■□□□□ 0.63
COMMD6-207ENST00000464050 SPATA31A5Q5VU36 1347 aa18.98■□□□□ 0.63
COMMD6-207ENST00000464050 SPATA31A7Q8IWB4 1347 aa18.98■□□□□ 0.63
COMMD6-207ENST00000464050 USP47Q96K76 1375 aa18.97■□□□□ 0.63
COMMD6-207ENST00000464050 SOX12O15370 315 aa18.97■□□□□ 0.63
COMMD6-207ENST00000464050 SF3B2Q13435 895 aaKnown RBP18.97■□□□□ 0.63
COMMD6-207ENST00000464050 KRT27Q7Z3Y8 459 aa18.97■□□□□ 0.63
COMMD6-207ENST00000464050 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.97■□□□□ 0.633e-6■■□□□ 14
COMMD6-207ENST00000464050 BRWD3Q6RI45 1802 aa18.97■□□□□ 0.63
COMMD6-207ENST00000464050 USP35Q9P2H5 1018 aa18.96■□□□□ 0.63
COMMD6-207ENST00000464050 PIK3C2AO00443 1686 aa18.95■□□□□ 0.62
COMMD6-207ENST00000464050 CCDC125Q86Z20 511 aa18.95■□□□□ 0.62
COMMD6-207ENST00000464050 KCNH5Q8NCM2 988 aa18.95■□□□□ 0.62
COMMD6-207ENST00000464050 CPSF1Q10570 1443 aaKnown RBP18.94■□□□□ 0.62
COMMD6-207ENST00000464050 SSH2Q76I76 1423 aa18.94■□□□□ 0.62
COMMD6-207ENST00000464050 TMF1P82094 1093 aa18.94■□□□□ 0.62
COMMD6-207ENST00000464050 PUS7Q96PZ0 661 aaKnown RBP18.94■□□□□ 0.62
COMMD6-207ENST00000464050 SLC12A5Q9H2X9 1139 aa18.94■□□□□ 0.62
COMMD6-207ENST00000464050 MON2Q7Z3U7 1717 aa18.94■□□□□ 0.62
COMMD6-207ENST00000464050 NINLQ9Y2I6 1382 aa18.93■□□□□ 0.62
COMMD6-207ENST00000464050 ONECUT3O60422 494 aaPredicted RBP18.93■□□□□ 0.62
COMMD6-207ENST00000464050 SLIT3O75094 1523 aa18.93■□□□□ 0.62
COMMD6-207ENST00000464050 SPATA31A1Q5TZJ5 1347 aa18.93■□□□□ 0.62
COMMD6-207ENST00000464050 CDCA8Q53HL2 280 aa18.92■□□□□ 0.62
COMMD6-207ENST00000464050 TESK2Q96S53 571 aa18.91■□□□□ 0.62
COMMD6-207ENST00000464050 CAMTA1Q9Y6Y1 1673 aa18.91■□□□□ 0.62
COMMD6-207ENST00000464050 LARP1Q6PKG0 1096 aaKnown RBP18.9■□□□□ 0.62
COMMD6-207ENST00000464050 AATKQ6ZMQ8 1374 aa18.9■□□□□ 0.62
COMMD6-207ENST00000464050 BLMP54132 1417 aaPredicted RBP18.9■□□□□ 0.62
COMMD6-207ENST00000464050 EDC4Q6P2E9 1401 aaKnown RBP18.9■□□□□ 0.62
COMMD6-207ENST00000464050 LMO7Q8WWI1 1683 aa18.89■□□□□ 0.61
COMMD6-207ENST00000464050 CSB-PGBD3P0DP91 1061 aa18.89■□□□□ 0.61
COMMD6-207ENST00000464050 TCP11L2Q8N4U5 519 aa18.89■□□□□ 0.61
COMMD6-207ENST00000464050 A0A1W2PP64 1363 aa18.89■□□□□ 0.61
COMMD6-207ENST00000464050 TOM1L2Q6ZVM7 507 aa18.88■□□□□ 0.61
COMMD6-207ENST00000464050 NME9Q86XW9 330 aa18.88■□□□□ 0.61
COMMD6-207ENST00000464050 COL5A2P05997 1499 aaPredicted RBP18.88■□□□□ 0.61
COMMD6-207ENST00000464050 PDE3BQ13370 1112 aa18.87■□□□□ 0.61
COMMD6-207ENST00000464050 CD163L1Q9NR16 1453 aa18.86■□□□□ 0.61
COMMD6-207ENST00000464050 THSD7AQ9UPZ6 1657 aa18.85■□□□□ 0.61
COMMD6-207ENST00000464050 CRB1P82279 1406 aa18.85■□□□□ 0.61
COMMD6-207ENST00000464050 BARGINQ6ZT62 677 aa18.85■□□□□ 0.61
COMMD6-207ENST00000464050 THRAP3Q9Y2W1 955 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms