RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 NUDT16Q96DE0 195 aaKnown RBP25.06■■□□□ 1.6
SF1-212ENST00000463343 SEPT12Q8IYM1 358 aa25.04■■□□□ 1.6
SF1-212ENST00000463343 CABLES1Q8TDN4 633 aa25.04■■□□□ 1.6
SF1-212ENST00000463343 PMFBP1Q8TBY8 1022 aa25.03■■□□□ 1.6
SF1-212ENST00000463343 TULP4Q9NRJ4 1543 aa25.02■■□□□ 1.6
SF1-212ENST00000463343 CABP2Q9NPB3 220 aa25.02■■□□□ 1.6
SF1-212ENST00000463343 QRICH2Q9H0J4 1663 aa25.01■■□□□ 1.59
SF1-212ENST00000463343 BRWD3Q6RI45 1802 aa25.01■■□□□ 1.59
SF1-212ENST00000463343 ST20-MTHFSA0A0A6YYL1 179 aa25.01■■□□□ 1.59
SF1-212ENST00000463343 FAM83GA6ND36 823 aa25.01■■□□□ 1.59
SF1-212ENST00000463343 SRPK2P78362 688 aaKnown RBP25.01■■□□□ 1.59
SF1-212ENST00000463343 LMOD2Q6P5Q4 547 aa25■■□□□ 1.59
SF1-212ENST00000463343 EVC2Q86UK5 1308 aa25■■□□□ 1.59
SF1-212ENST00000463343 CCDC61Q9Y6R9 512 aa24.99■■□□□ 1.59
SF1-212ENST00000463343 ABCA3Q99758 1704 aa24.98■■□□□ 1.59
SF1-212ENST00000463343 PLCH1Q4KWH8 1693 aa24.98■■□□□ 1.59
SF1-212ENST00000463343 ATP7BP35670 1465 aa24.97■■□□□ 1.59
SF1-212ENST00000463343 SBNO2Q9Y2G9 1366 aa24.97■■□□□ 1.59
SF1-212ENST00000463343 SF3B2Q13435 895 aaKnown RBP24.97■■□□□ 1.59
SF1-212ENST00000463343 KRT27Q7Z3Y8 459 aa24.97■■□□□ 1.59
SF1-212ENST00000463343 TESK2Q96S53 571 aa24.96■■□□□ 1.59
SF1-212ENST00000463343 TRPM3Q9HCF6 1732 aaPredicted RBP24.95■■□□□ 1.59
SF1-212ENST00000463343 USP47Q96K76 1375 aa24.95■■□□□ 1.59
SF1-212ENST00000463343 CCDC9Q9Y3X0 531 aaKnown RBP24.95■■□□□ 1.58
SF1-212ENST00000463343 PLEKHG3A1L390 1219 aa24.94■■□□□ 1.58
SF1-212ENST00000463343 NGDNQ8NEJ9 315 aaKnown RBP24.94■■□□□ 1.58
SF1-212ENST00000463343 ALS2Q96Q42 1657 aa24.93■■□□□ 1.58
SF1-212ENST00000463343 DEFB132Q7Z7B7 95 aa24.91■■□□□ 1.58
SF1-212ENST00000463343 BTG4Q9NY30 223 aa24.91■■□□□ 1.58
SF1-212ENST00000463343 CABP1Q9NZU7 370 aa24.9■■□□□ 1.58
SF1-212ENST00000463343 ACEP12821 1306 aa24.89■■□□□ 1.58
SF1-212ENST00000463343 COL14A1Q05707 1796 aaKnown RBP24.89■■□□□ 1.57
SF1-212ENST00000463343 PLEKHG5O94827 1062 aa24.88■■□□□ 1.57
SF1-212ENST00000463343 NRAPQ86VF7 1730 aa24.88■■□□□ 1.57
SF1-212ENST00000463343 PPIP5K1Q6PFW1 1433 aa24.87■■□□□ 1.57
SF1-212ENST00000463343 SLC24A1O60721 1099 aa24.87■■□□□ 1.57
SF1-212ENST00000463343 POLR3AO14802 1390 aaPredicted RBP24.86■■□□□ 1.57
SF1-212ENST00000463343 FAM98CQ17RN3 349 aaKnown RBP24.85■■□□□ 1.57
SF1-212ENST00000463343 PUS7Q96PZ0 661 aaKnown RBP24.85■■□□□ 1.57
SF1-212ENST00000463343 SPATA31A5Q5VU36 1347 aa24.85■■□□□ 1.57
SF1-212ENST00000463343 SPATA31A7Q8IWB4 1347 aa24.85■■□□□ 1.57
SF1-212ENST00000463343 ITSN1Q15811 1721 aa24.84■■□□□ 1.57
SF1-212ENST00000463343 BAG6P46379 1132 aa24.84■■□□□ 1.57
SF1-212ENST00000463343 TOPAZ1Q8N9V7 1692 aa24.84■■□□□ 1.57
SF1-212ENST00000463343 EIF4G2P78344 907 aaKnown RBP eCLIP24.83■■□□□ 1.57
SF1-212ENST00000463343 HSPA5P11021 654 aaKnown RBP24.82■■□□□ 1.56
SF1-212ENST00000463343 TMF1P82094 1093 aa24.82■■□□□ 1.56
SF1-212ENST00000463343 CRYBG1Q9Y4K1 1723 aa24.82■■□□□ 1.56
SF1-212ENST00000463343 A0A0G2JS52 829 aa24.81■■□□□ 1.56
SF1-212ENST00000463343 MYT1Q01538 1121 aa24.81■■□□□ 1.56
SF1-212ENST00000463343 PAK3O75914 559 aaPredicted RBP24.8■■□□□ 1.56
SF1-212ENST00000463343 PRDM11Q9NQV5 511 aa24.8■■□□□ 1.56
SF1-212ENST00000463343 SLC12A5Q9H2X9 1139 aa24.78■■□□□ 1.56
SF1-212ENST00000463343 TMC1Q8TDI8 760 aa24.77■■□□□ 1.56
SF1-212ENST00000463343 ZNF692Q9BU19 519 aaPredicted RBP24.76■■□□□ 1.55
SF1-212ENST00000463343 LRP5O75197 1615 aa24.75■■□□□ 1.55
SF1-212ENST00000463343 SPATA31A1Q5TZJ5 1347 aa24.75■■□□□ 1.55
SF1-212ENST00000463343 DISP2A7MBM2 1401 aa24.75■■□□□ 1.55
SF1-212ENST00000463343 THSD7AQ9UPZ6 1657 aa24.75■■□□□ 1.55
SF1-212ENST00000463343 RGPD1P0DJD0 1748 aa24.73■■□□□ 1.55
SF1-212ENST00000463343 KIAA0232Q92628 1395 aa24.73■■□□□ 1.55
SF1-212ENST00000463343 CPSF1Q10570 1443 aaKnown RBP24.72■■□□□ 1.55
SF1-212ENST00000463343 CDCA8Q53HL2 280 aa24.72■■□□□ 1.55
SF1-212ENST00000463343 USP6P35125 1406 aa24.71■■□□□ 1.55
SF1-212ENST00000463343 BRD4O60885 1362 aaPredicted RBP24.71■■□□□ 1.55
SF1-212ENST00000463343 SSH2Q76I76 1423 aa24.7■■□□□ 1.55
SF1-212ENST00000463343 EN1Q05925 392 aaPredicted RBP24.7■■□□□ 1.54
SF1-212ENST00000463343 NUTM2GQ5VZR2 741 aa24.7■■□□□ 1.54
SF1-212ENST00000463343 FAM196AQ6ZSG2 479 aa24.7■■□□□ 1.54
SF1-212ENST00000463343 ABTB2Q8N961 1025 aa24.7■■□□□ 1.54
SF1-212ENST00000463343 BARGINQ6ZT62 677 aa24.69■■□□□ 1.54
SF1-212ENST00000463343 CD163L1Q9NR16 1453 aa24.69■■□□□ 1.54
SF1-212ENST00000463343 KTN1Q86UP2 1357 aaKnown RBP24.68■■□□□ 1.54
SF1-212ENST00000463343 PHRF1Q9P1Y6 1649 aaKnown RBP24.68■■□□□ 1.54
SF1-212ENST00000463343 TTC21BQ7Z4L5 1316 aa24.68■■□□□ 1.54
SF1-212ENST00000463343 ZC3H6P61129 1189 aaKnown RBP24.67■■□□□ 1.54
SF1-212ENST00000463343 CHRNA2Q15822 529 aa24.67■■□□□ 1.54
SF1-212ENST00000463343 HDGFL2Q7Z4V5 671 aaPredicted RBP24.67■■□□□ 1.54
SF1-212ENST00000463343 TERF2IPQ9NYB0 399 aa24.67■■□□□ 1.54
SF1-212ENST00000463343 CPDO75976 1380 aa24.67■■□□□ 1.54
SF1-212ENST00000463343 FAM182BQ5T319 152 aa24.66■■□□□ 1.54
SF1-212ENST00000463343 NINLQ9Y2I6 1382 aa24.66■■□□□ 1.54
SF1-212ENST00000463343 C11orf95C9JLR9 678 aaPredicted RBP24.65■■□□□ 1.54
SF1-212ENST00000463343 PSDA5PKW4 1024 aaPredicted RBP24.64■■□□□ 1.54
SF1-212ENST00000463343 EVA1CP58658 441 aa24.64■■□□□ 1.54
SF1-212ENST00000463343 STRN4Q9NRL3 753 aa24.64■■□□□ 1.54
SF1-212ENST00000463343 PARD3Q8TEW0 1356 aa24.64■■□□□ 1.53
SF1-212ENST00000463343 USP19O94966 1318 aa24.63■■□□□ 1.53
SF1-212ENST00000463343 AKAP12Q02952 1782 aa24.63■■□□□ 1.53
SF1-212ENST00000463343 NLRP13Q86W25 1043 aa24.63■■□□□ 1.53
SF1-212ENST00000463343 CAMKK2Q96RR4 588 aa24.63■■□□□ 1.53
SF1-212ENST00000463343 A0A1W2PP64 1363 aa24.63■■□□□ 1.53
SF1-212ENST00000463343 TNS1Q9HBL0 1735 aaKnown RBP24.63■■□□□ 1.53
SF1-212ENST00000463343 NLRP6P59044 892 aa24.62■■□□□ 1.53
SF1-212ENST00000463343 THRAP3Q9Y2W1 955 aaKnown RBP24.62■■□□□ 1.53
SF1-212ENST00000463343 TTC21AQ8NDW8 1320 aa24.61■■□□□ 1.53
SF1-212ENST00000463343 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.61■■□□□ 1.53
SF1-212ENST00000463343 POLR3GLQ9BT43 218 aa24.61■■□□□ 1.53
SF1-212ENST00000463343 CAMTA1Q9Y6Y1 1673 aa24.59■■□□□ 1.53
SF1-212ENST00000463343 TRIM37O94972 964 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms