RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 VSIG8P0DPA2 414 aa8.57□□□□□ -1.04
KDM3A-208ENST00000463013 RETREG3Q86VR2 466 aa8.57□□□□□ -1.04
KDM3A-208ENST00000463013 SPIRE2Q8WWL2 714 aa8.57□□□□□ -1.04
KDM3A-208ENST00000463013 MRPL14Q6P1L8 145 aaKnown RBP8.56□□□□□ -1.04
KDM3A-208ENST00000463013 TMEM151AQ8N4L1 468 aa8.56□□□□□ -1.04
KDM3A-208ENST00000463013 MPNDQ8N594 471 aa8.56□□□□□ -1.04
KDM3A-208ENST00000463013 FAM117AQ9C073 453 aa8.56□□□□□ -1.04
KDM3A-208ENST00000463013 VARSP26640 1264 aaKnown RBP8.55□□□□□ -1.04
KDM3A-208ENST00000463013 DIXDC1Q155Q3 683 aa8.55□□□□□ -1.04
KDM3A-208ENST00000463013 DDRGK1Q96HY6 314 aa8.55□□□□□ -1.04
KDM3A-208ENST00000463013 TBC1D2Q9BYX2 928 aa8.55□□□□□ -1.04
KDM3A-208ENST00000463013 RNF225M0QZC1 329 aaPredicted RBP8.54□□□□□ -1.04
KDM3A-208ENST00000463013 CCNYL3P0C7X3 344 aa8.54□□□□□ -1.04
KDM3A-208ENST00000463013 SH3BP2P78314 561 aa8.54□□□□□ -1.04
KDM3A-208ENST00000463013 PTCRAQ6ISU1 281 aaPredicted RBP8.54□□□□□ -1.04
KDM3A-208ENST00000463013 KCTD17Q8N5Z5 321 aa8.53□□□□□ -1.04
KDM3A-208ENST00000463013 HLA-CQ95604 372 aa8.53□□□□□ -1.04
KDM3A-208ENST00000463013 MOXD2PA6NHM9 499 aa8.52□□□□□ -1.05
KDM3A-208ENST00000463013 ADH1CP00326 375 aa8.52□□□□□ -1.05
KDM3A-208ENST00000463013 NNTQ13423 1086 aa8.52□□□□□ -1.05
KDM3A-208ENST00000463013 PURBQ96QR8 312 aaKnown RBP8.52□□□□□ -1.05
KDM3A-208ENST00000463013 MAN1A2O60476 641 aa8.51□□□□□ -1.05
KDM3A-208ENST00000463013 GDF11O95390 407 aa8.51□□□□□ -1.05
KDM3A-208ENST00000463013 RSPH6AQ9H0K4 717 aa8.51□□□□□ -1.05
KDM3A-208ENST00000463013 FDX1P10109 184 aa8.5□□□□□ -1.05
KDM3A-208ENST00000463013 NDUFV2P19404 249 aa8.5□□□□□ -1.05
KDM3A-208ENST00000463013 GJA5P36382 358 aa8.5□□□□□ -1.05
KDM3A-208ENST00000463013 WDR4P57081 412 aaKnown RBP8.5□□□□□ -1.05
KDM3A-208ENST00000463013 GUCA2AQ02747 115 aa8.5□□□□□ -1.05
KDM3A-208ENST00000463013 PTPRNQ16849 979 aa8.5□□□□□ -1.05
KDM3A-208ENST00000463013 MYSM1Q5VVJ2 828 aa8.5□□□□□ -1.05
KDM3A-208ENST00000463013 EVA1BQ9NVM1 165 aa8.5□□□□□ -1.05
KDM3A-208ENST00000463013 C6orf229H3BNL8 230 aa8.49□□□□□ -1.05
KDM3A-208ENST00000463013 UPP2O95045 317 aa8.49□□□□□ -1.05
KDM3A-208ENST00000463013 RSBN1LQ6PCB5 846 aaPredicted RBP8.49□□□□□ -1.05
KDM3A-208ENST00000463013 IL27Q8NEV9 243 aa8.49□□□□□ -1.05
KDM3A-208ENST00000463013 SYMPKQ92797 1274 aaKnown RBP8.49□□□□□ -1.05
KDM3A-208ENST00000463013 SPTLC1O15269 473 aa8.48□□□□□ -1.05
KDM3A-208ENST00000463013 RIC3Q7Z5B4 369 aa8.48□□□□□ -1.05
KDM3A-208ENST00000463013 BAP1Q92560 729 aa8.48□□□□□ -1.05
KDM3A-208ENST00000463013 UNC93B1Q9H1C4 597 aa8.48□□□□□ -1.05
KDM3A-208ENST00000463013 PCDHGC3Q9UN70 934 aa8.48□□□□□ -1.05
KDM3A-208ENST00000463013 TIMP2P16035 220 aa8.47□□□□□ -1.05
KDM3A-208ENST00000463013 RASSF7Q02833 373 aa8.47□□□□□ -1.05
KDM3A-208ENST00000463013 SH3D19Q5HYK7 790 aa8.47□□□□□ -1.05
KDM3A-208ENST00000463013 FAM174AQ8TBP5 190 aa8.47□□□□□ -1.05
KDM3A-208ENST00000463013 KCNH2Q12809 1159 aa8.46□□□□□ -1.06
KDM3A-208ENST00000463013 LINC01559Q495D7 138 aa8.46□□□□□ -1.06
KDM3A-208ENST00000463013 ZNF511Q8NB15 262 aa8.46□□□□□ -1.06
KDM3A-208ENST00000463013 TLL2Q9Y6L7 1015 aa8.46□□□□□ -1.06
KDM3A-208ENST00000463013 CLK2P49760 499 aaKnown RBP8.45□□□□□ -1.06
KDM3A-208ENST00000463013 SKIV2LQ15477 1246 aaKnown RBP8.45□□□□□ -1.06
KDM3A-208ENST00000463013 TUSC1Q2TAM9 212 aa8.45□□□□□ -1.06
KDM3A-208ENST00000463013 LIMD1Q9UGP4 676 aa8.45□□□□□ -1.06
KDM3A-208ENST00000463013 SPDYE5A6NIY4 337 aa8.44□□□□□ -1.06
KDM3A-208ENST00000463013 PPFIA3O75145 1194 aa8.44□□□□□ -1.06
KDM3A-208ENST00000463013 POLR3EQ9NVU0 708 aa8.44□□□□□ -1.06
KDM3A-208ENST00000463013 PCDHB15Q9Y5E8 787 aa8.44□□□□□ -1.06
KDM3A-208ENST00000463013 SOBPA7XYQ1 873 aa8.43□□□□□ -1.06
KDM3A-208ENST00000463013 IGHA1P01876 353 aa8.43□□□□□ -1.06
KDM3A-208ENST00000463013 GOPCQ9HD26 462 aa8.43□□□□□ -1.06
KDM3A-208ENST00000463013 GSK3AP49840 483 aa8.42□□□□□ -1.06
KDM3A-208ENST00000463013 NR5A1Q13285 461 aa8.42□□□□□ -1.06
KDM3A-208ENST00000463013 MTMR2Q13614 643 aa8.42□□□□□ -1.06
KDM3A-208ENST00000463013 CSPP1Q1MSJ5 1256 aa8.42□□□□□ -1.06
KDM3A-208ENST00000463013 PRPF38BQ5VTL8 546 aaKnown RBP8.42□□□□□ -1.06
KDM3A-208ENST00000463013 DESI1Q6ICB0 168 aa8.42□□□□□ -1.06
KDM3A-208ENST00000463013 KLF16Q9BXK1 252 aaPredicted RBP8.42□□□□□ -1.06
KDM3A-208ENST00000463013 ZIC2O95409 532 aaPredicted RBP8.41□□□□□ -1.06
KDM3A-208ENST00000463013 BMP2P12643 396 aa8.41□□□□□ -1.06
KDM3A-208ENST00000463013 C6orf118Q5T5N4 469 aa8.41□□□□□ -1.06
KDM3A-208ENST00000463013 CDK15Q96Q40 435 aa8.41□□□□□ -1.06
KDM3A-208ENST00000463013 ZBTB3Q9H5J0 574 aa8.41□□□□□ -1.06
KDM3A-208ENST00000463013 ADAMTS8Q9UP79 889 aa8.41□□□□□ -1.06
KDM3A-208ENST00000463013 HRCP23327 699 aa8.4□□□□□ -1.06
KDM3A-208ENST00000463013 ARID5BQ14865 1188 aa8.4□□□□□ -1.06
KDM3A-208ENST00000463013 LILRB3O75022 631 aa8.39□□□□□ -1.07
KDM3A-208ENST00000463013 QPCTQ16769 361 aa8.39□□□□□ -1.07
KDM3A-208ENST00000463013 PROCA1Q8NCQ7 364 aaPredicted RBP8.39□□□□□ -1.07
KDM3A-208ENST00000463013 CABLES1Q8TDN4 633 aa8.39□□□□□ -1.07
KDM3A-208ENST00000463013 PCMTD1Q96MG8 357 aaPredicted RBP8.39□□□□□ -1.07
KDM3A-208ENST00000463013 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.39□□□□□ -1.07
KDM3A-208ENST00000463013 FOXK2Q01167 660 aa8.38□□□□□ -1.07
KDM3A-208ENST00000463013 PRR7Q8TB68 274 aa8.38□□□□□ -1.07
KDM3A-208ENST00000463013 NUTM2BA6NNL0 878 aaPredicted RBP8.37□□□□□ -1.07
KDM3A-208ENST00000463013 NUTM2EB1AL46 878 aaPredicted RBP8.37□□□□□ -1.07
KDM3A-208ENST00000463013 CTHP32929 405 aa8.37□□□□□ -1.07
KDM3A-208ENST00000463013 NUTM2DQ5VT03 806 aaPredicted RBP8.37□□□□□ -1.07
KDM3A-208ENST00000463013 NUTM2AQ8IVF1 878 aaPredicted RBP8.37□□□□□ -1.07
KDM3A-208ENST00000463013 ATP1B4Q9UN42 357 aaPredicted RBP8.37□□□□□ -1.07
KDM3A-208ENST00000463013 DNMT3AQ9Y6K1 912 aaPredicted RBP8.37□□□□□ -1.07
KDM3A-208ENST00000463013 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.36□□□□□ -1.07
KDM3A-208ENST00000463013 ITPKCQ96DU7 683 aa8.36□□□□□ -1.07
KDM3A-208ENST00000463013 CNTNAP3BQ96NU0 1288 aa8.36□□□□□ -1.07
KDM3A-208ENST00000463013 CNTNAP3Q9BZ76 1288 aa8.36□□□□□ -1.07
KDM3A-208ENST00000463013 ZFAND3Q9H8U3 227 aa8.36□□□□□ -1.07
KDM3A-208ENST00000463013 CFAP99D6REC4 459 aa8.35□□□□□ -1.07
KDM3A-208ENST00000463013 AGERQ15109 404 aa8.35□□□□□ -1.07
KDM3A-208ENST00000463013 RTL5Q5HYW3 569 aaPredicted RBP8.35□□□□□ -1.07
KDM3A-208ENST00000463013 KANK3Q6NY19 840 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms