RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 DDX17Q92841 729 aaKnown RBP8.82□□□□□ -1
SF3B1-206ENST00000462613 KIF20BQ96Q89 1820 aa8.82□□□□□ -1
SF3B1-206ENST00000462613 USP6P35125 1406 aa8.81□□□□□ -1
SF3B1-206ENST00000462613 ANKRD36BQ8N2N9 1353 aa8.81□□□□□ -1
SF3B1-206ENST00000462613 NRKQ7Z2Y5 1582 aa8.81□□□□□ -1
SF3B1-206ENST00000462613 SPATA31A3Q5VYP0 1347 aa8.8□□□□□ -1
SF3B1-206ENST00000462613 TTC21AQ8NDW8 1320 aa8.8□□□□□ -1
SF3B1-206ENST00000462613 MEX3CQ5U5Q3 659 aaKnown RBP8.8□□□□□ -1
SF3B1-206ENST00000462613 ABTB2Q8N961 1025 aa8.8□□□□□ -1
SF3B1-206ENST00000462613 SLC12A5Q9H2X9 1139 aa8.8□□□□□ -1
SF3B1-206ENST00000462613 PNPLA6Q8IY17 1366 aa8.8□□□□□ -1
SF3B1-206ENST00000462613 ABCA3Q99758 1704 aa8.8□□□□□ -1
SF3B1-206ENST00000462613 EDC4Q6P2E9 1401 aaKnown RBP8.8□□□□□ -1
SF3B1-206ENST00000462613 A0A1W2PP64 1363 aa8.79□□□□□ -1
SF3B1-206ENST00000462613 NLRP13Q86W25 1043 aa8.79□□□□□ -1
SF3B1-206ENST00000462613 CPSF1Q10570 1443 aaKnown RBP8.79□□□□□ -1
SF3B1-206ENST00000462613 MED1Q15648 1581 aaPredicted RBP8.78□□□□□ -1
SF3B1-206ENST00000462613 NUTM2BA6NNL0 878 aaPredicted RBP8.78□□□□□ -1
SF3B1-206ENST00000462613 NUTM2EB1AL46 878 aaPredicted RBP8.78□□□□□ -1
SF3B1-206ENST00000462613 NUTM2AQ8IVF1 878 aaPredicted RBP8.78□□□□□ -1
SF3B1-206ENST00000462613 PHRF1Q9P1Y6 1649 aaKnown RBP8.78□□□□□ -1
SF3B1-206ENST00000462613 PIK3C2AO00443 1686 aa8.78□□□□□ -1
SF3B1-206ENST00000462613 ANKRD26Q9UPS8 1709 aa8.77□□□□□ -1
SF3B1-206ENST00000462613 CRYBG1Q9Y4K1 1723 aa8.77□□□□□ -1
SF3B1-206ENST00000462613 NLRP6P59044 892 aa8.77□□□□□ -1.01
SF3B1-206ENST00000462613 PHF23Q9BUL5 403 aaPredicted RBP8.77□□□□□ -1.01
SF3B1-206ENST00000462613 USP54Q70EL1 1684 aa8.77□□□□□ -1.01
SF3B1-206ENST00000462613 KIF7Q2M1P5 1343 aa8.77□□□□□ -1.01
SF3B1-206ENST00000462613 TTC21BQ7Z4L5 1316 aa8.77□□□□□ -1.01
SF3B1-206ENST00000462613 CD163L1Q9NR16 1453 aa8.77□□□□□ -1.01
SF3B1-206ENST00000462613 CCDC7Q96M83 1385 aa8.76□□□□□ -1.01
SF3B1-206ENST00000462613 PLEKHG5O94827 1062 aa8.76□□□□□ -1.01
SF3B1-206ENST00000462613 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.76□□□□□ -1.01
SF3B1-206ENST00000462613 KCNH5Q8NCM2 988 aa8.76□□□□□ -1.01
SF3B1-206ENST00000462613 CGNL1Q0VF96 1302 aa8.76□□□□□ -1.01
SF3B1-206ENST00000462613 LTN1O94822 1766 aa8.76□□□□□ -1.01
SF3B1-206ENST00000462613 NWD2Q9ULI1 1742 aa8.75□□□□□ -1.01
SF3B1-206ENST00000462613 COG3Q96JB2 828 aa8.75□□□□□ -1.01
SF3B1-206ENST00000462613 KNSTRNQ9Y448 316 aa8.75□□□□□ -1.01
SF3B1-206ENST00000462613 COL14A1Q05707 1796 aaKnown RBP8.75□□□□□ -1.01
SF3B1-206ENST00000462613 SSH2Q76I76 1423 aa8.74□□□□□ -1.01
SF3B1-206ENST00000462613 NSD3Q9BZ95 1437 aa8.74□□□□□ -1.01
SF3B1-206ENST00000462613 ADAMTS2O95450 1211 aa8.74□□□□□ -1.01
SF3B1-206ENST00000462613 NUTM2GQ5VZR2 741 aa8.74□□□□□ -1.01
SF3B1-206ENST00000462613 PANK3Q9H999 370 aa8.74□□□□□ -1.01
SF3B1-206ENST00000462613 MAP2P11137 1827 aaKnown RBP8.74□□□□□ -1.01
SF3B1-206ENST00000462613 PLCH1Q4KWH8 1693 aa8.74□□□□□ -1.01
SF3B1-206ENST00000462613 NGLY1Q96IV0 654 aa8.73□□□□□ -1.01
SF3B1-206ENST00000462613 C8orf37Q96NL8 207 aa8.73□□□□□ -1.01
SF3B1-206ENST00000462613 PRDM11Q9NQV5 511 aa8.73□□□□□ -1.01
SF3B1-206ENST00000462613 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.73□□□□□ -1.01
SF3B1-206ENST00000462613 WASHC2AQ641Q2 1341 aa8.73□□□□□ -1.01
SF3B1-206ENST00000462613 NSD2O96028 1365 aa8.73□□□□□ -1.01
SF3B1-206ENST00000462613 USP31Q70CQ4 1352 aa8.73□□□□□ -1.01
SF3B1-206ENST00000462613 SLIT3O75094 1523 aa8.72□□□□□ -1.01
SF3B1-206ENST00000462613 C11orf95C9JLR9 678 aaPredicted RBP8.72□□□□□ -1.01
SF3B1-206ENST00000462613 ZNF772Q68DY9 489 aaPredicted RBP8.72□□□□□ -1.01
SF3B1-206ENST00000462613 NME9Q86XW9 330 aa8.72□□□□□ -1.01
SF3B1-206ENST00000462613 CABLES1Q8TDN4 633 aa8.72□□□□□ -1.01
SF3B1-206ENST00000462613 USP19O94966 1318 aa8.72□□□□□ -1.01
SF3B1-206ENST00000462613 LRP6O75581 1613 aa8.72□□□□□ -1.01
SF3B1-206ENST00000462613 RGPD5Q99666 1765 aa8.71□□□□□ -1.01
SF3B1-206ENST00000462613 GCP02774 474 aa8.71□□□□□ -1.02
SF3B1-206ENST00000462613 ZBTB7CA1YPR0 619 aa8.7□□□□□ -1.02
SF3B1-206ENST00000462613 SOX12O15370 315 aa8.7□□□□□ -1.02
SF3B1-206ENST00000462613 ZC3H6P61129 1189 aaKnown RBP8.7□□□□□ -1.02
SF3B1-206ENST00000462613 GGNBP2Q9H3C7 697 aa8.7□□□□□ -1.02
SF3B1-206ENST00000462613 CPDO75976 1380 aa8.7□□□□□ -1.02
SF3B1-206ENST00000462613 OVOS2A0A0J9YW53 1432 aa8.7□□□□□ -1.02
SF3B1-206ENST00000462613 OVOS2Q6IE36 1432 aa8.7□□□□□ -1.02
SF3B1-206ENST00000462613 ABCC6O95255 1503 aa8.7□□□□□ -1.02
SF3B1-206ENST00000462613 FAM208AQ9UK61 1670 aaKnown RBP8.69□□□□□ -1.02
SF3B1-206ENST00000462613 ZNF316A6NFI3 1004 aaPredicted RBP8.69□□□□□ -1.02
SF3B1-206ENST00000462613 FYB1O15117 783 aa8.69□□□□□ -1.02
SF3B1-206ENST00000462613 USP21Q9UK80 565 aa8.69□□□□□ -1.02
SF3B1-206ENST00000462613 AFF2P51816 1311 aa8.69□□□□□ -1.02
SF3B1-206ENST00000462613 KIAA0232Q92628 1395 aa8.69□□□□□ -1.02
SF3B1-206ENST00000462613 NRAPQ86VF7 1730 aa8.68□□□□□ -1.02
SF3B1-206ENST00000462613 EVA1CP58658 441 aa8.68□□□□□ -1.02
SF3B1-206ENST00000462613 MORC1Q86VD1 984 aa8.68□□□□□ -1.02
SF3B1-206ENST00000462613 CARD14Q9BXL6 1004 aa8.68□□□□□ -1.02
SF3B1-206ENST00000462613 NFAT5O94916 1531 aa8.68□□□□□ -1.02
SF3B1-206ENST00000462613 AMPHP49418 695 aa8.67□□□□□ -1.02
SF3B1-206ENST00000462613 FNBP4Q8N3X1 1017 aaPredicted RBP8.67□□□□□ -1.02
SF3B1-206ENST00000462613 BTG4Q9NY30 223 aa8.67□□□□□ -1.02
SF3B1-206ENST00000462613 TRPC5Q9UL62 973 aaPredicted RBP8.67□□□□□ -1.02
SF3B1-206ENST00000462613 CCDC9Q9Y3X0 531 aaKnown RBP8.67□□□□□ -1.02
SF3B1-206ENST00000462613 COL18A1P39060 1754 aa8.66□□□□□ -1.02
SF3B1-206ENST00000462613 LMO7Q8WWI1 1683 aa8.66□□□□□ -1.02
SF3B1-206ENST00000462613 SLIT2O94813 1529 aa8.66□□□□□ -1.02
SF3B1-206ENST00000462613 SMG6Q86US8 1419 aaKnown RBP8.66□□□□□ -1.02
SF3B1-206ENST00000462613 RTL1A6NKG5 1358 aa8.66□□□□□ -1.02
SF3B1-206ENST00000462613 KIF24Q5T7B8 1368 aa8.66□□□□□ -1.02
SF3B1-206ENST00000462613 AATKQ6ZMQ8 1374 aa8.66□□□□□ -1.02
SF3B1-206ENST00000462613 NPC1L1Q9UHC9 1359 aa8.66□□□□□ -1.02
SF3B1-206ENST00000462613 FAM83GA6ND36 823 aa8.66□□□□□ -1.02
SF3B1-206ENST00000462613 DDX10Q13206 875 aaKnown RBP8.66□□□□□ -1.02
SF3B1-206ENST00000462613 CHRNA2Q15822 529 aa8.66□□□□□ -1.02
SF3B1-206ENST00000462613 ARHGEF25Q86VW2 580 aa8.66□□□□□ -1.02
SF3B1-206ENST00000462613 UNC5CLQ8IV45 518 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms