RNA–Protein interactions for RNA: ENST00000462488.1

PGBD2-203, Transcript of piggyBac transposable element derived 2, humanhuman

TSL 5

Gene PGBD2, Length 282 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-203ENST00000462488 PLEKHG3A1L390 1219 aa11.73□□□□□ -0.53
PGBD2-203ENST00000462488 COL22A1Q8NFW1 1626 aaPredicted RBP11.73□□□□□ -0.53
PGBD2-203ENST00000462488 TRPC5Q9UL62 973 aaPredicted RBP11.73□□□□□ -0.53
PGBD2-203ENST00000462488 ST20-MTHFSA0A0A6YYL1 179 aa11.72□□□□□ -0.53
PGBD2-203ENST00000462488 ZBTB7CA1YPR0 619 aa11.72□□□□□ -0.53
PGBD2-203ENST00000462488 SLC24A1O60721 1099 aa11.71□□□□□ -0.53
PGBD2-203ENST00000462488 RBM6P78332 1123 aaKnown RBP11.71□□□□□ -0.53
PGBD2-203ENST00000462488 ATAD2Q6PL18 1390 aa11.7□□□□□ -0.54
PGBD2-203ENST00000462488 ZC3H6P61129 1189 aaKnown RBP11.7□□□□□ -0.54
PGBD2-203ENST00000462488 NLRP13Q86W25 1043 aa11.7□□□□□ -0.54
PGBD2-203ENST00000462488 FNBP4Q8N3X1 1017 aaPredicted RBP11.7□□□□□ -0.54
PGBD2-203ENST00000462488 PRDM11Q9NQV5 511 aa11.7□□□□□ -0.54
PGBD2-203ENST00000462488 MARF1Q9Y4F3 1742 aaKnown RBP11.69□□□□□ -0.54
PGBD2-203ENST00000462488 POLR3AO14802 1390 aaPredicted RBP11.69□□□□□ -0.54
PGBD2-203ENST00000462488 TOPAZ1Q8N9V7 1692 aa11.69□□□□□ -0.54
PGBD2-203ENST00000462488 A0A0G2JS52 829 aa11.69□□□□□ -0.54
PGBD2-203ENST00000462488 NLRP6P59044 892 aa11.69□□□□□ -0.54
PGBD2-203ENST00000462488 MYT1Q01538 1121 aa11.69□□□□□ -0.54
PGBD2-203ENST00000462488 HDGFL2Q7Z4V5 671 aaPredicted RBP11.69□□□□□ -0.54
PGBD2-203ENST00000462488 ZNF692Q9BU19 519 aaPredicted RBP11.69□□□□□ -0.54
PGBD2-203ENST00000462488 TRPM3Q9HCF6 1732 aaPredicted RBP11.69□□□□□ -0.54
PGBD2-203ENST00000462488 USP47Q96K76 1375 aa11.68□□□□□ -0.54
PGBD2-203ENST00000462488 TMF1P82094 1093 aa11.68□□□□□ -0.54
PGBD2-203ENST00000462488 UNC5CLQ8IV45 518 aa11.68□□□□□ -0.54
PGBD2-203ENST00000462488 POLR3GLQ9BT43 218 aa11.68□□□□□ -0.54
PGBD2-203ENST00000462488 KTN1Q86UP2 1357 aaKnown RBP11.67□□□□□ -0.54
PGBD2-203ENST00000462488 FAM83GA6ND36 823 aa11.67□□□□□ -0.54
PGBD2-203ENST00000462488 SOX12O15370 315 aa11.67□□□□□ -0.54
PGBD2-203ENST00000462488 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.67□□□□□ -0.54
PGBD2-203ENST00000462488 BTG4Q9NY30 223 aa11.67□□□□□ -0.54
PGBD2-203ENST00000462488 SBNO2Q9Y2G9 1366 aa11.67□□□□□ -0.54
PGBD2-203ENST00000462488 ALS2Q96Q42 1657 aa11.66□□□□□ -0.54
PGBD2-203ENST00000462488 EVA1CP58658 441 aa11.66□□□□□ -0.54
PGBD2-203ENST00000462488 CHRNA2Q15822 529 aa11.66□□□□□ -0.54
PGBD2-203ENST00000462488 SLC12A5Q9H2X9 1139 aa11.66□□□□□ -0.54
PGBD2-203ENST00000462488 STRN4Q9NRL3 753 aa11.66□□□□□ -0.54
PGBD2-203ENST00000462488 TERF2IPQ9NYB0 399 aa11.66□□□□□ -0.54
PGBD2-203ENST00000462488 CDCA8Q53HL2 280 aa11.65□□□□□ -0.54
PGBD2-203ENST00000462488 GJD4Q96KN9 370 aaPredicted RBP11.65□□□□□ -0.54
PGBD2-203ENST00000462488 USP6P35125 1406 aa11.65□□□□□ -0.54
PGBD2-203ENST00000462488 BRD4O60885 1362 aaPredicted RBP11.65□□□□□ -0.55
PGBD2-203ENST00000462488 ABCA3Q99758 1704 aa11.64□□□□□ -0.55
PGBD2-203ENST00000462488 KIAA0232Q92628 1395 aa11.64□□□□□ -0.55
PGBD2-203ENST00000462488 BCL9LQ86UU0 1499 aa11.63□□□□□ -0.55
PGBD2-203ENST00000462488 TTC21BQ7Z4L5 1316 aa11.63□□□□□ -0.55
PGBD2-203ENST00000462488 GCP02774 474 aa11.63□□□□□ -0.55
PGBD2-203ENST00000462488 TESK2Q96S53 571 aa11.63□□□□□ -0.55
PGBD2-203ENST00000462488 TTC21AQ8NDW8 1320 aa11.62□□□□□ -0.55
PGBD2-203ENST00000462488 PLCH1Q4KWH8 1693 aa11.62□□□□□ -0.55
PGBD2-203ENST00000462488 ATRNO75882 1429 aa11.62□□□□□ -0.55
PGBD2-203ENST00000462488 KCNA4P22459 653 aa11.62□□□□□ -0.55
PGBD2-203ENST00000462488 EIF4G2P78344 907 aaKnown RBP eCLIP11.62□□□□□ -0.55
PGBD2-203ENST00000462488 VPS72Q15906 364 aa11.62□□□□□ -0.55
PGBD2-203ENST00000462488 SLIT2O94813 1529 aa11.61□□□□□ -0.55
PGBD2-203ENST00000462488 KCNH5Q8NCM2 988 aa11.61□□□□□ -0.55
PGBD2-203ENST00000462488 PUS7Q96PZ0 661 aaKnown RBP11.61□□□□□ -0.55
PGBD2-203ENST00000462488 USP35Q9P2H5 1018 aa11.61□□□□□ -0.55
PGBD2-203ENST00000462488 COL14A1Q05707 1796 aaKnown RBP11.61□□□□□ -0.55
PGBD2-203ENST00000462488 RGS12O14924 1447 aa11.6□□□□□ -0.55
PGBD2-203ENST00000462488 PHRF1Q9P1Y6 1649 aaKnown RBP11.6□□□□□ -0.55
PGBD2-203ENST00000462488 AKAP12Q02952 1782 aa11.6□□□□□ -0.55
PGBD2-203ENST00000462488 CDK12Q9NYV4 1490 aaPredicted RBP11.6□□□□□ -0.55
PGBD2-203ENST00000462488 NWD2Q9ULI1 1742 aa11.6□□□□□ -0.55
PGBD2-203ENST00000462488 FAM98CQ17RN3 349 aaKnown RBP11.59□□□□□ -0.55
PGBD2-203ENST00000462488 NME9Q86XW9 330 aa11.59□□□□□ -0.55
PGBD2-203ENST00000462488 SEPT12Q8IYM1 358 aa11.59□□□□□ -0.55
PGBD2-203ENST00000462488 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.59□□□□□ -0.55
PGBD2-203ENST00000462488 CPSF1Q10570 1443 aaKnown RBP11.59□□□□□ -0.55
PGBD2-203ENST00000462488 USP19O94966 1318 aa11.59□□□□□ -0.55
PGBD2-203ENST00000462488 NINLQ9Y2I6 1382 aa11.58□□□□□ -0.56
PGBD2-203ENST00000462488 CSB-PGBD3P0DP91 1061 aa11.58□□□□□ -0.56
PGBD2-203ENST00000462488 HSPA5P11021 654 aaKnown RBP11.58□□□□□ -0.56
PGBD2-203ENST00000462488 ZRANB1Q9UGI0 708 aa11.58□□□□□ -0.56
PGBD2-203ENST00000462488 A0A1W2PP64 1363 aa11.57□□□□□ -0.56
PGBD2-203ENST00000462488 CRYBG1Q9Y4K1 1723 aa11.57□□□□□ -0.56
PGBD2-203ENST00000462488 PIK3C2AO00443 1686 aa11.56□□□□□ -0.56
PGBD2-203ENST00000462488 EDC4Q6P2E9 1401 aaKnown RBP11.56□□□□□ -0.56
PGBD2-203ENST00000462488 TOM1L2Q6ZVM7 507 aa11.56□□□□□ -0.56
PGBD2-203ENST00000462488 SSH2Q76I76 1423 aa11.56□□□□□ -0.56
PGBD2-203ENST00000462488 NRKQ7Z2Y5 1582 aa11.56□□□□□ -0.56
PGBD2-203ENST00000462488 MON2Q7Z3U7 1717 aa11.56□□□□□ -0.56
PGBD2-203ENST00000462488 UPF1Q92900 1129 aaKnown RBP eCLIP11.56□□□□□ -0.56
PGBD2-203ENST00000462488 COG3Q96JB2 828 aa11.56□□□□□ -0.56
PGBD2-203ENST00000462488 CPDO75976 1380 aa11.55□□□□□ -0.56
PGBD2-203ENST00000462488 LARP1Q6PKG0 1096 aaKnown RBP11.55□□□□□ -0.56
PGBD2-203ENST00000462488 KRT27Q7Z3Y8 459 aa11.55□□□□□ -0.56
PGBD2-203ENST00000462488 SPATA31A5Q5VU36 1347 aa11.55□□□□□ -0.56
PGBD2-203ENST00000462488 SPATA31A7Q8IWB4 1347 aa11.55□□□□□ -0.56
PGBD2-203ENST00000462488 GLI3P10071 1580 aa11.54□□□□□ -0.56
PGBD2-203ENST00000462488 SF3B2Q13435 895 aaKnown RBP11.54□□□□□ -0.56
PGBD2-203ENST00000462488 CD163L1Q9NR16 1453 aa11.54□□□□□ -0.56
PGBD2-203ENST00000462488 ANKRD36BQ8N2N9 1353 aa11.54□□□□□ -0.56
PGBD2-203ENST00000462488 NRAPQ86VF7 1730 aa11.53□□□□□ -0.56
PGBD2-203ENST00000462488 GGNBP2Q9H3C7 697 aa11.53□□□□□ -0.56
PGBD2-203ENST00000462488 SPATA31A1Q5TZJ5 1347 aa11.53□□□□□ -0.56
PGBD2-203ENST00000462488 SLIT3O75094 1523 aa11.52□□□□□ -0.57
PGBD2-203ENST00000462488 AMPHP49418 695 aa11.52□□□□□ -0.57
PGBD2-203ENST00000462488 PDE3BQ13370 1112 aa11.52□□□□□ -0.57
PGBD2-203ENST00000462488 ARHGEF25Q86VW2 580 aa11.52□□□□□ -0.57
PGBD2-203ENST00000462488 TCP11L2Q8N4U5 519 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms