RNA–Protein interactions for RNA: ENST00000462440.5

PRUNE1-208, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 5

Gene PRUNE1, Length 732 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-208ENST00000462440 SSH2Q76I76 1423 aa23.74■■□□□ 1.39
PRUNE1-208ENST00000462440 MARF1Q9Y4F3 1742 aaKnown RBP23.73■■□□□ 1.39
PRUNE1-208ENST00000462440 FBXO41Q8TF61 875 aa23.72■■□□□ 1.39
PRUNE1-208ENST00000462440 PANK3Q9H999 370 aa23.72■■□□□ 1.39
PRUNE1-208ENST00000462440 ANKRD26Q9UPS8 1709 aa23.72■■□□□ 1.39
PRUNE1-208ENST00000462440 NSD3Q9BZ95 1437 aa23.71■■□□□ 1.39
PRUNE1-208ENST00000462440 BRD4O60885 1362 aaPredicted RBP23.71■■□□□ 1.39
PRUNE1-208ENST00000462440 USP54Q70EL1 1684 aa23.7■■□□□ 1.39
PRUNE1-208ENST00000462440 SBNO1A3KN83 1393 aa23.7■■□□□ 1.38
PRUNE1-208ENST00000462440 CARD14Q9BXL6 1004 aa23.7■■□□□ 1.38
PRUNE1-208ENST00000462440 CRYBG1Q9Y4K1 1723 aa23.7■■□□□ 1.38
PRUNE1-208ENST00000462440 SHPRHQ149N8 1683 aa23.7■■□□□ 1.38
PRUNE1-208ENST00000462440 TNS3Q68CZ2 1445 aa23.69■■□□□ 1.38
PRUNE1-208ENST00000462440 ABCA3Q99758 1704 aa23.69■■□□□ 1.38
PRUNE1-208ENST00000462440 COL22A1Q8NFW1 1626 aaPredicted RBP23.68■■□□□ 1.38
PRUNE1-208ENST00000462440 TTC21BQ7Z4L5 1316 aa23.67■■□□□ 1.38
PRUNE1-208ENST00000462440 PAK3O75914 559 aaPredicted RBP23.67■■□□□ 1.38
PRUNE1-208ENST00000462440 SPATA31A3Q5VYP0 1347 aa23.66■■□□□ 1.38
PRUNE1-208ENST00000462440 DDX10Q13206 875 aaKnown RBP23.66■■□□□ 1.38
PRUNE1-208ENST00000462440 TTC21AQ8NDW8 1320 aa23.65■■□□□ 1.38
PRUNE1-208ENST00000462440 HSPA1LP34931 641 aa23.65■■□□□ 1.38
PRUNE1-208ENST00000462440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.65■■□□□ 1.38
PRUNE1-208ENST00000462440 PHRF1Q9P1Y6 1649 aaKnown RBP23.65■■□□□ 1.38
PRUNE1-208ENST00000462440 MED1Q15648 1581 aaPredicted RBP23.64■■□□□ 1.37
PRUNE1-208ENST00000462440 LRRC59Q96AG4 307 aaKnown RBP23.62■■□□□ 1.37
PRUNE1-208ENST00000462440 ARHGEF10O15013 1369 aa23.62■■□□□ 1.37
PRUNE1-208ENST00000462440 PER1O15534 1290 aaPredicted RBP23.61■■□□□ 1.37
PRUNE1-208ENST00000462440 LMOD2Q6P5Q4 547 aa23.6■■□□□ 1.37
PRUNE1-208ENST00000462440 NME9Q86XW9 330 aa23.6■■□□□ 1.37
PRUNE1-208ENST00000462440 PNPLA6Q8IY17 1366 aa23.6■■□□□ 1.37
PRUNE1-208ENST00000462440 ABTB2Q8N961 1025 aa23.59■■□□□ 1.37
PRUNE1-208ENST00000462440 KNSTRNQ9Y448 316 aa23.59■■□□□ 1.37
PRUNE1-208ENST00000462440 CGNL1Q0VF96 1302 aa23.59■■□□□ 1.37
PRUNE1-208ENST00000462440 OVOS2A0A0J9YW53 1432 aa23.58■■□□□ 1.36
PRUNE1-208ENST00000462440 OVOS2Q6IE36 1432 aa23.58■■□□□ 1.36
PRUNE1-208ENST00000462440 NUTM2GQ5VZR2 741 aa23.57■■□□□ 1.36
PRUNE1-208ENST00000462440 ZRANB1Q9UGI0 708 aa23.57■■□□□ 1.36
PRUNE1-208ENST00000462440 USP31Q70CQ4 1352 aa23.56■■□□□ 1.36
PRUNE1-208ENST00000462440 JCADQ9P266 1359 aa23.56■■□□□ 1.36
PRUNE1-208ENST00000462440 SLIT3O75094 1523 aa23.56■■□□□ 1.36
PRUNE1-208ENST00000462440 FYB1O15117 783 aa23.56■■□□□ 1.36
PRUNE1-208ENST00000462440 NSD2O96028 1365 aa23.54■■□□□ 1.36
PRUNE1-208ENST00000462440 NLRP6P59044 892 aa23.54■■□□□ 1.36
PRUNE1-208ENST00000462440 AMER1Q5JTC6 1135 aaPredicted RBP23.54■■□□□ 1.36
PRUNE1-208ENST00000462440 GGNBP2Q9H3C7 697 aa23.54■■□□□ 1.36
PRUNE1-208ENST00000462440 LTN1O94822 1766 aa23.54■■□□□ 1.36
PRUNE1-208ENST00000462440 NLRP13Q86W25 1043 aa23.53■■□□□ 1.36
PRUNE1-208ENST00000462440 USP19O94966 1318 aa23.53■■□□□ 1.36
PRUNE1-208ENST00000462440 MAP2P11137 1827 aaKnown RBP23.52■■□□□ 1.36
PRUNE1-208ENST00000462440 NPC1L1Q9UHC9 1359 aa23.52■■□□□ 1.36
PRUNE1-208ENST00000462440 PLEKHG5O94827 1062 aa23.51■■□□□ 1.35
PRUNE1-208ENST00000462440 NFAT5O94916 1531 aa23.5■■□□□ 1.35
PRUNE1-208ENST00000462440 COG3Q96JB2 828 aa23.5■■□□□ 1.35
PRUNE1-208ENST00000462440 CABLES1Q8TDN4 633 aa23.49■■□□□ 1.35
PRUNE1-208ENST00000462440 CC2D1BQ5T0F9 858 aaKnown RBP23.48■■□□□ 1.35
PRUNE1-208ENST00000462440 CNGB1Q14028 1251 aaPredicted RBP23.46■■□□□ 1.35
PRUNE1-208ENST00000462440 SPATA31A6Q5VVP1 1343 aa23.45■■□□□ 1.34
PRUNE1-208ENST00000462440 RGPD5Q99666 1765 aa23.45■■□□□ 1.34
PRUNE1-208ENST00000462440 LRP6O75581 1613 aa23.44■■□□□ 1.34
PRUNE1-208ENST00000462440 ILDR1Q86SU0 546 aaPredicted RBP23.44■■□□□ 1.34
PRUNE1-208ENST00000462440 SOX12O15370 315 aa23.43■■□□□ 1.34
PRUNE1-208ENST00000462440 GCP02774 474 aa23.43■■□□□ 1.34
PRUNE1-208ENST00000462440 HAP1P54257 671 aaPredicted RBP23.43■■□□□ 1.34
PRUNE1-208ENST00000462440 MORC1Q86VD1 984 aa23.43■■□□□ 1.34
PRUNE1-208ENST00000462440 PLCH1Q4KWH8 1693 aa23.42■■□□□ 1.34
PRUNE1-208ENST00000462440 KCNH5Q8NCM2 988 aa23.42■■□□□ 1.34
PRUNE1-208ENST00000462440 COL18A1P39060 1754 aa23.42■■□□□ 1.34
PRUNE1-208ENST00000462440 NUTM2BA6NNL0 878 aaPredicted RBP23.41■■□□□ 1.34
PRUNE1-208ENST00000462440 NUTM2EB1AL46 878 aaPredicted RBP23.41■■□□□ 1.34
PRUNE1-208ENST00000462440 NUTM2AQ8IVF1 878 aaPredicted RBP23.41■■□□□ 1.34
PRUNE1-208ENST00000462440 COL14A1Q05707 1796 aaKnown RBP23.41■■□□□ 1.34
PRUNE1-208ENST00000462440 PEAK1Q9H792 1746 aa23.41■■□□□ 1.34
PRUNE1-208ENST00000462440 PARD3Q8TEW0 1356 aa23.4■■□□□ 1.34
PRUNE1-208ENST00000462440 LMO7Q8WWI1 1683 aa23.38■■□□□ 1.33
PRUNE1-208ENST00000462440 FBLN1P23142 703 aa23.38■■□□□ 1.33
PRUNE1-208ENST00000462440 TNNT2P45379 298 aaPredicted RBP23.38■■□□□ 1.33
PRUNE1-208ENST00000462440 CPDO75976 1380 aa23.38■■□□□ 1.33
PRUNE1-208ENST00000462440 AATKQ6ZMQ8 1374 aa23.38■■□□□ 1.33
PRUNE1-208ENST00000462440 ZC3H6P61129 1189 aaKnown RBP23.37■■□□□ 1.33
PRUNE1-208ENST00000462440 KIAA0232Q92628 1395 aa23.37■■□□□ 1.33
PRUNE1-208ENST00000462440 NWD2Q9ULI1 1742 aa23.36■■□□□ 1.33
PRUNE1-208ENST00000462440 ABCC6O95255 1503 aa23.35■■□□□ 1.33
PRUNE1-208ENST00000462440 ADAMTS2O95450 1211 aa23.35■■□□□ 1.33
PRUNE1-208ENST00000462440 MAP3K19Q56UN5 1328 aa23.33■■□□□ 1.33
PRUNE1-208ENST00000462440 SMG6Q86US8 1419 aaKnown RBP23.33■■□□□ 1.33
PRUNE1-208ENST00000462440 NRAPQ86VF7 1730 aa23.33■■□□□ 1.33
PRUNE1-208ENST00000462440 RRS1Q15050 365 aaKnown RBP23.33■■□□□ 1.33
PRUNE1-208ENST00000462440 ARHGEF25Q86VW2 580 aa23.33■■□□□ 1.33
PRUNE1-208ENST00000462440 ZBTB7CA1YPR0 619 aa23.32■■□□□ 1.32
PRUNE1-208ENST00000462440 RALBP1Q15311 655 aa23.32■■□□□ 1.32
PRUNE1-208ENST00000462440 PRKRIP1Q9H875 184 aaPredicted RBP23.32■■□□□ 1.32
PRUNE1-208ENST00000462440 PRDM11Q9NQV5 511 aa23.32■■□□□ 1.32
PRUNE1-208ENST00000462440 DIEXFQ68CQ4 756 aaKnown RBP23.31■■□□□ 1.32
PRUNE1-208ENST00000462440 EMILIN1Q9Y6C2 1016 aa23.31■■□□□ 1.32
PRUNE1-208ENST00000462440 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.3■■□□□ 1.32
PRUNE1-208ENST00000462440 CHRNA2Q15822 529 aa23.3■■□□□ 1.32
PRUNE1-208ENST00000462440 POLKQ9UBT6 870 aa23.3■■□□□ 1.32
PRUNE1-208ENST00000462440 CDK12Q9NYV4 1490 aaPredicted RBP23.3■■□□□ 1.32
PRUNE1-208ENST00000462440 RTL1A6NKG5 1358 aa23.29■■□□□ 1.32
PRUNE1-208ENST00000462440 CAMTA1Q9Y6Y1 1673 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms