RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 TTC21AQ8NDW8 1320 aa16.47■□□□□ 0.23
RAE1-207ENST00000462438 CABP1Q9NZU7 370 aa16.47■□□□□ 0.23
RAE1-207ENST00000462438 CGNL1Q0VF96 1302 aa16.47■□□□□ 0.23
RAE1-207ENST00000462438 PARD3Q8TEW0 1356 aa16.47■□□□□ 0.23
RAE1-207ENST00000462438 MARF1Q9Y4F3 1742 aaKnown RBP16.46■□□□□ 0.23
RAE1-207ENST00000462438 USP31Q70CQ4 1352 aa16.46■□□□□ 0.23
RAE1-207ENST00000462438 AMER1Q5JTC6 1135 aaPredicted RBP16.46■□□□□ 0.22
RAE1-207ENST00000462438 C14orf37Q86TY3 774 aa16.46■□□□□ 0.22
RAE1-207ENST00000462438 MED1Q15648 1581 aaPredicted RBP16.45■□□□□ 0.22
RAE1-207ENST00000462438 PHF8Q9UPP1 1060 aa16.45■□□□□ 0.22
RAE1-207ENST00000462438 PIK3C2AO00443 1686 aa16.45■□□□□ 0.22
RAE1-207ENST00000462438 CARD14Q9BXL6 1004 aa16.45■□□□□ 0.22
RAE1-207ENST00000462438 SBNO1A3KN83 1393 aa16.45■□□□□ 0.22
RAE1-207ENST00000462438 PXDNQ92626 1479 aa16.44■□□□□ 0.22
RAE1-207ENST00000462438 ACEP12821 1306 aa16.44■□□□□ 0.22
RAE1-207ENST00000462438 RALBP1Q15311 655 aa16.43■□□□□ 0.22
RAE1-207ENST00000462438 KNSTRNQ9Y448 316 aa16.43■□□□□ 0.22
RAE1-207ENST00000462438 TMC1Q8TDI8 760 aa16.43■□□□□ 0.22
RAE1-207ENST00000462438 ROBO1Q9Y6N7 1651 aa16.42■□□□□ 0.22
RAE1-207ENST00000462438 CRYBG1Q9Y4K1 1723 aa16.42■□□□□ 0.22
RAE1-207ENST00000462438 PHRF1Q9P1Y6 1649 aaKnown RBP16.42■□□□□ 0.22
RAE1-207ENST00000462438 OVOS2A0A0J9YW53 1432 aa16.42■□□□□ 0.22
RAE1-207ENST00000462438 OVOS2Q6IE36 1432 aa16.42■□□□□ 0.22
RAE1-207ENST00000462438 POLR3GLQ9BT43 218 aa16.4■□□□□ 0.22
RAE1-207ENST00000462438 SLIT3O75094 1523 aa16.4■□□□□ 0.22
RAE1-207ENST00000462438 SLAIN2Q9P270 581 aa16.4■□□□□ 0.22
RAE1-207ENST00000462438 COL22A1Q8NFW1 1626 aaPredicted RBP16.39■□□□□ 0.21
RAE1-207ENST00000462438 NPHP3Q7Z494 1330 aa16.39■□□□□ 0.21
RAE1-207ENST00000462438 SMG6Q86US8 1419 aaKnown RBP16.39■□□□□ 0.21
RAE1-207ENST00000462438 TTC21BQ7Z4L5 1316 aa16.39■□□□□ 0.21
RAE1-207ENST00000462438 PRKRIP1Q9H875 184 aaPredicted RBP16.39■□□□□ 0.21
RAE1-207ENST00000462438 ABCC6O95255 1503 aa16.39■□□□□ 0.21
RAE1-207ENST00000462438 AATKQ6ZMQ8 1374 aa16.38■□□□□ 0.21
RAE1-207ENST00000462438 ANP32CO43423 234 aa16.38■□□□□ 0.21
RAE1-207ENST00000462438 RBM33Q96EV2 1170 aaKnown RBP16.38■□□□□ 0.21
RAE1-207ENST00000462438 CCER2I3L3R5 266 aa16.37■□□□□ 0.21
RAE1-207ENST00000462438 BRINP3Q76B58 766 aa16.37■□□□□ 0.21
RAE1-207ENST00000462438 ESCO1Q5FWF5 840 aa16.37■□□□□ 0.21
RAE1-207ENST00000462438 SOS2Q07890 1332 aaPredicted RBP16.36■□□□□ 0.21
RAE1-207ENST00000462438 NGDNQ8NEJ9 315 aaKnown RBP16.36■□□□□ 0.21
RAE1-207ENST00000462438 DEKP35659 375 aaKnown RBP16.36■□□□□ 0.21
RAE1-207ENST00000462438 PSME1Q06323 249 aa16.36■□□□□ 0.21
RAE1-207ENST00000462438 TNS3Q68CZ2 1445 aa16.36■□□□□ 0.21
RAE1-207ENST00000462438 CERKQ8TCT0 537 aa16.35■□□□□ 0.21
RAE1-207ENST00000462438 COL16A1Q07092 1604 aaPredicted RBP16.35■□□□□ 0.21
RAE1-207ENST00000462438 ABCA3Q99758 1704 aa16.34■□□□□ 0.21
RAE1-207ENST00000462438 FYB1O15117 783 aa16.34■□□□□ 0.21
RAE1-207ENST00000462438 ORAI2Q96SN7 254 aa16.34■□□□□ 0.21
RAE1-207ENST00000462438 KIF24Q5T7B8 1368 aa16.34■□□□□ 0.21
RAE1-207ENST00000462438 TOM1O60784 492 aa16.34■□□□□ 0.21
RAE1-207ENST00000462438 ARHGEF10O15013 1369 aa16.34■□□□□ 0.21
RAE1-207ENST00000462438 MYBBP1AQ9BQG0 1328 aaKnown RBP16.34■□□□□ 0.21
RAE1-207ENST00000462438 INSRP06213 1382 aa16.33■□□□□ 0.2
RAE1-207ENST00000462438 USP19O94966 1318 aa16.33■□□□□ 0.2
RAE1-207ENST00000462438 NFAT5O94916 1531 aa16.32■□□□□ 0.2
RAE1-207ENST00000462438 PHLPP1O60346 1717 aa16.32■□□□□ 0.2
RAE1-207ENST00000462438 SHPRHQ149N8 1683 aa16.32■□□□□ 0.2
RAE1-207ENST00000462438 PMFBP1Q8TBY8 1022 aa16.32■□□□□ 0.2
RAE1-207ENST00000462438 RBM19Q9Y4C8 960 aaKnown RBP16.32■□□□□ 0.2
RAE1-207ENST00000462438 NUTM2FA1L443 756 aa16.3■□□□□ 0.2
RAE1-207ENST00000462438 MSH5O43196 834 aa16.3■□□□□ 0.2
RAE1-207ENST00000462438 KRT28Q7Z3Y7 464 aa16.3■□□□□ 0.2
RAE1-207ENST00000462438 SPATA31A3Q5VYP0 1347 aa16.29■□□□□ 0.2
RAE1-207ENST00000462438 CDK12Q9NYV4 1490 aaPredicted RBP16.29■□□□□ 0.2
RAE1-207ENST00000462438 UBE2Q2Q8WVN8 375 aa16.29■□□□□ 0.2
RAE1-207ENST00000462438 MAP2P11137 1827 aaKnown RBP16.29■□□□□ 0.2
RAE1-207ENST00000462438 NLRP13Q86W25 1043 aa16.29■□□□□ 0.2
RAE1-207ENST00000462438 RTL1A6NKG5 1358 aa16.27■□□□□ 0.2
RAE1-207ENST00000462438 COG3Q96JB2 828 aa16.27■□□□□ 0.2
RAE1-207ENST00000462438 PNPLA6Q8IY17 1366 aa16.27■□□□□ 0.2
RAE1-207ENST00000462438 MORC1Q86VD1 984 aa16.27■□□□□ 0.19
RAE1-207ENST00000462438 COL3A1P02461 1466 aaPredicted RBP16.26■□□□□ 0.19
RAE1-207ENST00000462438 NBR1Q14596 966 aa16.26■□□□□ 0.19
RAE1-207ENST00000462438 LTN1O94822 1766 aa16.26■□□□□ 0.19
RAE1-207ENST00000462438 FOXO3O43524 673 aa16.26■□□□□ 0.19
RAE1-207ENST00000462438 PPP2R1AP30153 589 aa16.25■□□□□ 0.19
RAE1-207ENST00000462438 NME9Q86XW9 330 aa16.25■□□□□ 0.19
RAE1-207ENST00000462438 KCNH5Q8NCM2 988 aa16.24■□□□□ 0.19
RAE1-207ENST00000462438 CC2D1BQ5T0F9 858 aaKnown RBP16.24■□□□□ 0.19
RAE1-207ENST00000462438 FAM208AQ9UK61 1670 aaKnown RBP16.24■□□□□ 0.19
RAE1-207ENST00000462438 PEAK1Q9H792 1746 aa16.24■□□□□ 0.19
RAE1-207ENST00000462438 CPDO75976 1380 aa16.23■□□□□ 0.19
RAE1-207ENST00000462438 COL18A1P39060 1754 aa16.23■□□□□ 0.19
RAE1-207ENST00000462438 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.23■□□□□ 0.19
RAE1-207ENST00000462438 GGNBP2Q9H3C7 697 aa16.22■□□□□ 0.19
RAE1-207ENST00000462438 CAMTA1Q9Y6Y1 1673 aa16.22■□□□□ 0.19
RAE1-207ENST00000462438 RGPD1P0DJD0 1748 aa16.21■□□□□ 0.19
RAE1-207ENST00000462438 IL27Q8NEV9 243 aa16.21■□□□□ 0.19
RAE1-207ENST00000462438 PKNOX2Q96KN3 472 aa16.21■□□□□ 0.19
RAE1-207ENST00000462438 ABTB2Q8N961 1025 aa16.21■□□□□ 0.19
RAE1-207ENST00000462438 LRRC59Q96AG4 307 aaKnown RBP16.21■□□□□ 0.19
RAE1-207ENST00000462438 LMO7Q8WWI1 1683 aa16.2■□□□□ 0.18
RAE1-207ENST00000462438 UBAP1LF5GYI3 381 aa16.2■□□□□ 0.18
RAE1-207ENST00000462438 NLRP6P59044 892 aa16.19■□□□□ 0.18
RAE1-207ENST00000462438 BLMP54132 1417 aaPredicted RBP16.19■□□□□ 0.18
RAE1-207ENST00000462438 PLEKHG2Q9H7P9 1386 aa16.18■□□□□ 0.18
RAE1-207ENST00000462438 COL14A1Q05707 1796 aaKnown RBP16.18■□□□□ 0.18
RAE1-207ENST00000462438 FLT4P35916 1363 aa16.17■□□□□ 0.18
RAE1-207ENST00000462438 PODXL2Q9NZ53 605 aa16.16■□□□□ 0.18
RAE1-207ENST00000462438 POLKQ9UBT6 870 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms