RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 TCERG1O14776 1098 aaKnown RBP16.37■□□□□ 0.21
COL4A6-204ENST00000461897 WDR43Q15061 677 aaKnown RBP eCLIP16.37■□□□□ 0.21
COL4A6-204ENST00000461897 IPO9Q96P70 1041 aaKnown RBP16.37■□□□□ 0.21
COL4A6-204ENST00000461897 EDC4Q6P2E9 1401 aaKnown RBP16.36■□□□□ 0.21
COL4A6-204ENST00000461897 NKTRP30414 1462 aaKnown RBP16.36■□□□□ 0.21
COL4A6-204ENST00000461897 ANP32AP39687 249 aaKnown RBP16.35■□□□□ 0.21
COL4A6-204ENST00000461897 EXOC6Q8TAG9 804 aa16.35■□□□□ 0.21
COL4A6-204ENST00000461897 NRKQ7Z2Y5 1582 aa16.34■□□□□ 0.21
COL4A6-204ENST00000461897 MS4A1P11836 297 aa16.34■□□□□ 0.21
COL4A6-204ENST00000461897 NALCNQ8IZF0 1738 aa16.34■□□□□ 0.21
COL4A6-204ENST00000461897 RGPD8O14715 1765 aaPredicted RBP16.33■□□□□ 0.2
COL4A6-204ENST00000461897 MTHFSP49914 203 aa16.33■□□□□ 0.2
COL4A6-204ENST00000461897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.33■□□□□ 0.2
COL4A6-204ENST00000461897 FMN2Q9NZ56 1722 aa16.32■□□□□ 0.2
COL4A6-204ENST00000461897 NUTM2FA1L443 756 aa16.31■□□□□ 0.2
COL4A6-204ENST00000461897 PAK3O75914 559 aaPredicted RBP16.31■□□□□ 0.2
COL4A6-204ENST00000461897 NWD1Q149M9 1564 aa16.31■□□□□ 0.2
COL4A6-204ENST00000461897 PLEKHG3A1L390 1219 aa16.3■□□□□ 0.2
COL4A6-204ENST00000461897 COL3A1P02461 1466 aaPredicted RBP16.3■□□□□ 0.2
COL4A6-204ENST00000461897 CDCA7LQ96GN5 454 aa16.3■□□□□ 0.2
COL4A6-204ENST00000461897 SALL2Q9Y467 1007 aaPredicted RBP16.3■□□□□ 0.2
COL4A6-204ENST00000461897 ACEP12821 1306 aa16.29■□□□□ 0.2
COL4A6-204ENST00000461897 NME9Q86XW9 330 aa16.28■□□□□ 0.2
COL4A6-204ENST00000461897 ZNF692Q9BU19 519 aaPredicted RBP16.28■□□□□ 0.2
COL4A6-204ENST00000461897 USP6P35125 1406 aa16.28■□□□□ 0.2
COL4A6-204ENST00000461897 ANKARQ7Z5J8 1434 aa16.28■□□□□ 0.2
COL4A6-204ENST00000461897 ZNF521Q96K83 1311 aa16.27■□□□□ 0.19
COL4A6-204ENST00000461897 CCDC146Q8IYE0 955 aa16.27■□□□□ 0.19
COL4A6-204ENST00000461897 CFAP53Q96M91 514 aa16.27■□□□□ 0.19
COL4A6-204ENST00000461897 KDM4FA0A1W2PPD8 638 aa16.25■□□□□ 0.19
COL4A6-204ENST00000461897 BACH2Q9BYV9 841 aa16.25■□□□□ 0.19
COL4A6-204ENST00000461897 ZRANB1Q9UGI0 708 aa16.25■□□□□ 0.19
COL4A6-204ENST00000461897 SSH2Q76I76 1423 aa16.25■□□□□ 0.19
COL4A6-204ENST00000461897 ADGRL3Q9HAR2 1447 aa16.25■□□□□ 0.19
COL4A6-204ENST00000461897 MAP2P11137 1827 aaKnown RBP16.25■□□□□ 0.19
COL4A6-204ENST00000461897 ZBTB47Q9UFB7 747 aaPredicted RBP16.25■□□□□ 0.19
COL4A6-204ENST00000461897 PNPLA6Q8IY17 1366 aa16.24■□□□□ 0.19
COL4A6-204ENST00000461897 PDE4AP27815 886 aa16.24■□□□□ 0.19
COL4A6-204ENST00000461897 RBM33Q96EV2 1170 aaKnown RBP16.24■□□□□ 0.19
COL4A6-204ENST00000461897 TTC21BQ7Z4L5 1316 aa16.23■□□□□ 0.19
COL4A6-204ENST00000461897 IQSEC2Q5JU85 1478 aa16.23■□□□□ 0.19
COL4A6-204ENST00000461897 FBLN1P23142 703 aa16.22■□□□□ 0.19
COL4A6-204ENST00000461897 PMFBP1Q8TBY8 1022 aa16.22■□□□□ 0.19
COL4A6-204ENST00000461897 OVOS2A0A0J9YW53 1432 aa16.22■□□□□ 0.19
COL4A6-204ENST00000461897 OVOS2Q6IE36 1432 aa16.22■□□□□ 0.19
COL4A6-204ENST00000461897 AATKQ6ZMQ8 1374 aa16.21■□□□□ 0.19
COL4A6-204ENST00000461897 APAF1O14727 1248 aa16.21■□□□□ 0.19
COL4A6-204ENST00000461897 COG3Q96JB2 828 aa16.21■□□□□ 0.19
COL4A6-204ENST00000461897 POLKQ9UBT6 870 aa16.21■□□□□ 0.19
COL4A6-204ENST00000461897 LMTK3Q96Q04 1460 aa16.21■□□□□ 0.18
COL4A6-204ENST00000461897 DUSP27Q5VZP5 1158 aa16.2■□□□□ 0.18
COL4A6-204ENST00000461897 DEKP35659 375 aaKnown RBP16.2■□□□□ 0.18
COL4A6-204ENST00000461897 CRBNQ96SW2 442 aa16.2■□□□□ 0.18
COL4A6-204ENST00000461897 STRCP1A6NGW2 1772 aa16.2■□□□□ 0.18
COL4A6-204ENST00000461897 CDK12Q9NYV4 1490 aaPredicted RBP16.19■□□□□ 0.18
COL4A6-204ENST00000461897 PIK3C2AO00443 1686 aa16.19■□□□□ 0.18
COL4A6-204ENST00000461897 HSPA2P54652 639 aa16.19■□□□□ 0.18
COL4A6-204ENST00000461897 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
COL4A6-204ENST00000461897 TRMT2AQ8IZ69 625 aaKnown RBP16.18■□□□□ 0.18
COL4A6-204ENST00000461897 NGDNQ8NEJ9 315 aaKnown RBP16.18■□□□□ 0.18
COL4A6-204ENST00000461897 EMILIN1Q9Y6C2 1016 aa16.18■□□□□ 0.18
COL4A6-204ENST00000461897 PLIN1O60240 522 aa16.17■□□□□ 0.18
COL4A6-204ENST00000461897 U2AF1L5P0DN76 240 aaPredicted RBP16.17■□□□□ 0.18
COL4A6-204ENST00000461897 U2AF1Q01081 240 aaKnown RBP eCLIP16.17■□□□□ 0.18
COL4A6-204ENST00000461897 RUNDC1Q96C34 613 aa16.17■□□□□ 0.18
COL4A6-204ENST00000461897 TTC21AQ8NDW8 1320 aa16.17■□□□□ 0.18
COL4A6-204ENST00000461897 NGEFQ8N5V2 710 aa16.16■□□□□ 0.18
COL4A6-204ENST00000461897 MARF1Q9Y4F3 1742 aaKnown RBP16.16■□□□□ 0.18
COL4A6-204ENST00000461897 DIAPH1O60610 1272 aaKnown RBP16.16■□□□□ 0.18
COL4A6-204ENST00000461897 GOLGA2Q08379 1002 aa16.16■□□□□ 0.18
COL4A6-204ENST00000461897 USP31Q70CQ4 1352 aa16.15■□□□□ 0.18
COL4A6-204ENST00000461897 STRCQ7RTU9 1775 aa16.15■□□□□ 0.18
COL4A6-204ENST00000461897 PPM1GO15355 546 aaPredicted RBP16.15■□□□□ 0.18
COL4A6-204ENST00000461897 USP54Q70EL1 1684 aa16.14■□□□□ 0.17
COL4A6-204ENST00000461897 U2SURPO15042 1029 aaKnown RBP16.14■□□□□ 0.17
COL4A6-204ENST00000461897 SLFN5Q08AF3 891 aa16.14■□□□□ 0.17
COL4A6-204ENST00000461897 RRS1Q15050 365 aaKnown RBP16.14■□□□□ 0.17
COL4A6-204ENST00000461897 CENPQQ7L2Z9 268 aaPredicted RBP16.14■□□□□ 0.17
COL4A6-204ENST00000461897 TCP11L2Q8N4U5 519 aa16.14■□□□□ 0.17
COL4A6-204ENST00000461897 PEAK1Q9H792 1746 aa16.13■□□□□ 0.17
COL4A6-204ENST00000461897 C14orf37Q86TY3 774 aa16.13■□□□□ 0.17
COL4A6-204ENST00000461897 PROSER2Q86WR7 435 aaPredicted RBP16.13■□□□□ 0.17
COL4A6-204ENST00000461897 PHF8Q9UPP1 1060 aa16.13■□□□□ 0.17
COL4A6-204ENST00000461897 LRRC7Q96NW7 1537 aa16.13■□□□□ 0.17
COL4A6-204ENST00000461897 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.12■□□□□ 0.17
COL4A6-204ENST00000461897 PLEKHF1Q96S99 279 aa16.12■□□□□ 0.17
COL4A6-204ENST00000461897 NBR1Q14596 966 aa16.12■□□□□ 0.17
COL4A6-204ENST00000461897 C20orf194Q5TEA3 1177 aa16.12■□□□□ 0.17
COL4A6-204ENST00000461897 PHF23Q9BUL5 403 aaPredicted RBP16.12■□□□□ 0.17
COL4A6-204ENST00000461897 RRP7AQ9Y3A4 280 aaKnown RBP16.12■□□□□ 0.17
COL4A6-204ENST00000461897 DMRT2Q9Y5R5 561 aa16.12■□□□□ 0.17
COL4A6-204ENST00000461897 WWC1Q8IX03 1113 aa16.11■□□□□ 0.17
COL4A6-204ENST00000461897 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
COL4A6-204ENST00000461897 USP35Q9P2H5 1018 aa16.11■□□□□ 0.17
COL4A6-204ENST00000461897 IL13P35225 146 aa16.1■□□□□ 0.17
COL4A6-204ENST00000461897 RTL5Q5HYW3 569 aaPredicted RBP16.1■□□□□ 0.17
COL4A6-204ENST00000461897 TMEM94Q12767 1356 aa16.09■□□□□ 0.17
COL4A6-204ENST00000461897 NEUROD2Q15784 382 aa16.09■□□□□ 0.17
COL4A6-204ENST00000461897 ESCO1Q5FWF5 840 aa16.09■□□□□ 0.17
COL4A6-204ENST00000461897 DDRGK1Q96HY6 314 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms