RNA–Protein interactions for RNA: ENST00000461794.1

TCEA3-204, Transcript of transcription elongation factor A3, humanhuman

TSL 3 BASIC

Gene TCEA3, Length 713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-204ENST00000461794 ATAD2Q6PL18 1390 aa18.08■□□□□ 0.49
TCEA3-204ENST00000461794 NGDNQ8NEJ9 315 aaKnown RBP18.08■□□□□ 0.48
TCEA3-204ENST00000461794 CDK19Q9BWU1 502 aa18.08■□□□□ 0.48
TCEA3-204ENST00000461794 POLR3AO14802 1390 aaPredicted RBP18.05■□□□□ 0.48
TCEA3-204ENST00000461794 CENPJQ9HC77 1338 aaPredicted RBP18.05■□□□□ 0.48
TCEA3-204ENST00000461794 PAK3O75914 559 aaPredicted RBP18.05■□□□□ 0.48
TCEA3-204ENST00000461794 FAM83GA6ND36 823 aa18.04■□□□□ 0.48
TCEA3-204ENST00000461794 NEUROD1Q13562 356 aa18.04■□□□□ 0.48
TCEA3-204ENST00000461794 NRKQ7Z2Y5 1582 aa18.03■□□□□ 0.48
TCEA3-204ENST00000461794 ACEP12821 1306 aa18.02■□□□□ 0.48
TCEA3-204ENST00000461794 VPS72Q15906 364 aa18.02■□□□□ 0.48
TCEA3-204ENST00000461794 PPIP5K1Q6PFW1 1433 aa18.02■□□□□ 0.48
TCEA3-204ENST00000461794 CCDC61Q9Y6R9 512 aa18■□□□□ 0.47
TCEA3-204ENST00000461794 SRPK2P78362 688 aaKnown RBP17.99■□□□□ 0.47
TCEA3-204ENST00000461794 NUTM2GQ5VZR2 741 aa17.99■□□□□ 0.47
TCEA3-204ENST00000461794 CABP2Q9NPB3 220 aa17.99■□□□□ 0.47
TCEA3-204ENST00000461794 BTG4Q9NY30 223 aa17.99■□□□□ 0.47
TCEA3-204ENST00000461794 CCDC9Q9Y3X0 531 aaKnown RBP17.99■□□□□ 0.47
TCEA3-204ENST00000461794 ROCK2O75116 1388 aaKnown RBP17.99■□□□□ 0.47
TCEA3-204ENST00000461794 PLEKHG3A1L390 1219 aa17.98■□□□□ 0.47
TCEA3-204ENST00000461794 NBPF8Q3BBV2 869 aa17.98■□□□□ 0.47
TCEA3-204ENST00000461794 KIAA0232Q92628 1395 aa17.98■□□□□ 0.47
TCEA3-204ENST00000461794 THSD7AQ9UPZ6 1657 aa17.96■□□□□ 0.47
TCEA3-204ENST00000461794 SEPT12Q8IYM1 358 aa17.96■□□□□ 0.47
TCEA3-204ENST00000461794 PRDM11Q9NQV5 511 aa17.96■□□□□ 0.47
TCEA3-204ENST00000461794 PIK3C2AO00443 1686 aa17.96■□□□□ 0.47
TCEA3-204ENST00000461794 LMO7Q8WWI1 1683 aa17.96■□□□□ 0.47
TCEA3-204ENST00000461794 AKAP12Q02952 1782 aa17.95■□□□□ 0.46
TCEA3-204ENST00000461794 CHRNA2Q15822 529 aa17.94■□□□□ 0.46
TCEA3-204ENST00000461794 SRCAPQ6ZRS2 3230 aa17.94■□□□□ 0.46
TCEA3-204ENST00000461794 USP6P35125 1406 aa17.93■□□□□ 0.46
TCEA3-204ENST00000461794 ONECUT3O60422 494 aaPredicted RBP17.92■□□□□ 0.46
TCEA3-204ENST00000461794 ZC3H6P61129 1189 aaKnown RBP17.92■□□□□ 0.46
TCEA3-204ENST00000461794 FAM98CQ17RN3 349 aaKnown RBP17.92■□□□□ 0.46
TCEA3-204ENST00000461794 USP19O94966 1318 aa17.92■□□□□ 0.46
TCEA3-204ENST00000461794 ABTB2Q8N961 1025 aa17.91■□□□□ 0.46
TCEA3-204ENST00000461794 CABP1Q9NZU7 370 aa17.91■□□□□ 0.46
TCEA3-204ENST00000461794 SPATA31A5Q5VU36 1347 aa17.91■□□□□ 0.46
TCEA3-204ENST00000461794 SPATA31A7Q8IWB4 1347 aa17.91■□□□□ 0.46
TCEA3-204ENST00000461794 BLMP54132 1417 aaPredicted RBP17.9■□□□□ 0.46
TCEA3-204ENST00000461794 CAMTA1Q9Y6Y1 1673 aa17.9■□□□□ 0.46
TCEA3-204ENST00000461794 A0A0G2JS52 829 aa17.9■□□□□ 0.46
TCEA3-204ENST00000461794 MYT1Q01538 1121 aa17.9■□□□□ 0.46
TCEA3-204ENST00000461794 EVC2Q86UK5 1308 aa17.9■□□□□ 0.46
TCEA3-204ENST00000461794 SSH2Q76I76 1423 aa17.89■□□□□ 0.46
TCEA3-204ENST00000461794 SLIT3O75094 1523 aa17.89■□□□□ 0.45
TCEA3-204ENST00000461794 TONSLQ96HA7 1378 aa17.89■□□□□ 0.45
TCEA3-204ENST00000461794 MON2Q7Z3U7 1717 aa17.89■□□□□ 0.45
TCEA3-204ENST00000461794 KRT27Q7Z3Y8 459 aa17.88■□□□□ 0.45
TCEA3-204ENST00000461794 CPDO75976 1380 aa17.88■□□□□ 0.45
TCEA3-204ENST00000461794 STRN4Q9NRL3 753 aa17.87■□□□□ 0.45
TCEA3-204ENST00000461794 TNS1Q9HBL0 1735 aaKnown RBP17.86■□□□□ 0.45
TCEA3-204ENST00000461794 CCDC125Q86Z20 511 aa17.86■□□□□ 0.45
TCEA3-204ENST00000461794 SPATA31A1Q5TZJ5 1347 aa17.86■□□□□ 0.45
TCEA3-204ENST00000461794 RGPD1P0DJD0 1748 aa17.86■□□□□ 0.45
TCEA3-204ENST00000461794 BRD4O60885 1362 aaPredicted RBP17.85■□□□□ 0.45
TCEA3-204ENST00000461794 TRIM26Q12899 539 aaPredicted RBP17.85■□□□□ 0.45
TCEA3-204ENST00000461794 SBNO2Q9Y2G9 1366 aa17.85■□□□□ 0.45
TCEA3-204ENST00000461794 COL18A1P39060 1754 aa17.84■□□□□ 0.45
TCEA3-204ENST00000461794 COL5A2P05997 1499 aaPredicted RBP17.84■□□□□ 0.45
TCEA3-204ENST00000461794 FAM182BQ5T319 152 aa17.84■□□□□ 0.45
TCEA3-204ENST00000461794 DEFB132Q7Z7B7 95 aa17.84■□□□□ 0.45
TCEA3-204ENST00000461794 CARD11Q9BXL7 1154 aa17.84■□□□□ 0.45
TCEA3-204ENST00000461794 GCP02774 474 aa17.83■□□□□ 0.44
TCEA3-204ENST00000461794 NLRP13Q86W25 1043 aa17.83■□□□□ 0.44
TCEA3-204ENST00000461794 CPSF1Q10570 1443 aaKnown RBP17.82■□□□□ 0.44
TCEA3-204ENST00000461794 USP35Q9P2H5 1018 aa17.82■□□□□ 0.44
TCEA3-204ENST00000461794 CD163L1Q9NR16 1453 aa17.82■□□□□ 0.44
TCEA3-204ENST00000461794 WNK3Q9BYP7 1800 aa17.82■□□□□ 0.44
TCEA3-204ENST00000461794 RGPD5Q99666 1765 aa17.81■□□□□ 0.44
TCEA3-204ENST00000461794 NLRP6P59044 892 aa17.81■□□□□ 0.44
TCEA3-204ENST00000461794 LARP1Q6PKG0 1096 aaKnown RBP17.81■□□□□ 0.44
TCEA3-204ENST00000461794 USP54Q70EL1 1684 aa17.8■□□□□ 0.44
TCEA3-204ENST00000461794 NFAT5O94916 1531 aa17.8■□□□□ 0.44
TCEA3-204ENST00000461794 PARP4Q9UKK3 1724 aaKnown RBP17.8■□□□□ 0.44
TCEA3-204ENST00000461794 TTC21BQ7Z4L5 1316 aa17.79■□□□□ 0.44
TCEA3-204ENST00000461794 ZBTB7CA1YPR0 619 aa17.79■□□□□ 0.44
TCEA3-204ENST00000461794 KTN1Q86UP2 1357 aaKnown RBP17.79■□□□□ 0.44
TCEA3-204ENST00000461794 EVA1CP58658 441 aa17.78■□□□□ 0.44
TCEA3-204ENST00000461794 LRRC37A3O60309 1634 aa17.78■□□□□ 0.44
TCEA3-204ENST00000461794 SF3B2Q13435 895 aaKnown RBP17.77■□□□□ 0.44
TCEA3-204ENST00000461794 ZRANB1Q9UGI0 708 aa17.77■□□□□ 0.44
TCEA3-204ENST00000461794 AATKQ6ZMQ8 1374 aa17.77■□□□□ 0.43
TCEA3-204ENST00000461794 CRB1P82279 1406 aa17.75■□□□□ 0.43
TCEA3-204ENST00000461794 SOX12O15370 315 aa17.75■□□□□ 0.43
TCEA3-204ENST00000461794 BARGINQ6ZT62 677 aa17.75■□□□□ 0.43
TCEA3-204ENST00000461794 LTN1O94822 1766 aa17.75■□□□□ 0.43
TCEA3-204ENST00000461794 TTC21AQ8NDW8 1320 aa17.74■□□□□ 0.43
TCEA3-204ENST00000461794 TCP11L2Q8N4U5 519 aa17.74■□□□□ 0.43
TCEA3-204ENST00000461794 ZNF692Q9BU19 519 aaPredicted RBP17.74■□□□□ 0.43
TCEA3-204ENST00000461794 PEAK1Q9H792 1746 aa17.73■□□□□ 0.43
TCEA3-204ENST00000461794 DISP2A7MBM2 1401 aa17.72■□□□□ 0.43
TCEA3-204ENST00000461794 A0A1W2PP64 1363 aa17.72■□□□□ 0.43
TCEA3-204ENST00000461794 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.72■□□□□ 0.43
TCEA3-204ENST00000461794 AXIN2Q9Y2T1 843 aa17.72■□□□□ 0.43
TCEA3-204ENST00000461794 BAG6P46379 1132 aa17.71■□□□□ 0.43
TCEA3-204ENST00000461794 TMC1Q8TDI8 760 aa17.71■□□□□ 0.43
TCEA3-204ENST00000461794 TESK2Q96S53 571 aa17.71■□□□□ 0.43
TCEA3-204ENST00000461794 SLC12A5Q9H2X9 1139 aa17.71■□□□□ 0.43
TCEA3-204ENST00000461794 ABCC6O95255 1503 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms