RNA–Protein interactions for RNA: ENST00000460424.5

ACAA1-212, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 4

Gene ACAA1, Length 538 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-212ENST00000460424 PLCH1Q4KWH8 1693 aa32.72■■■□□ 2.83
ACAA1-212ENST00000460424 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.72■■■□□ 2.83
ACAA1-212ENST00000460424 PHRF1Q9P1Y6 1649 aaKnown RBP32.71■■■□□ 2.83
ACAA1-212ENST00000460424 AKAP12Q02952 1782 aa32.7■■■□□ 2.83
ACAA1-212ENST00000460424 USP21Q9UK80 565 aa32.69■■■□□ 2.82
ACAA1-212ENST00000460424 FNBP4Q8N3X1 1017 aaPredicted RBP32.68■■■□□ 2.82
ACAA1-212ENST00000460424 NWD2Q9ULI1 1742 aa32.67■■■□□ 2.82
ACAA1-212ENST00000460424 ATAD2Q6PL18 1390 aa32.67■■■□□ 2.82
ACAA1-212ENST00000460424 CABP1Q9NZU7 370 aa32.66■■■□□ 2.82
ACAA1-212ENST00000460424 RXRBP28702 533 aa32.65■■■□□ 2.82
ACAA1-212ENST00000460424 QTRT2Q9H974 415 aaKnown RBP32.65■■■□□ 2.82
ACAA1-212ENST00000460424 SLIT2O94813 1529 aa32.63■■■□□ 2.81
ACAA1-212ENST00000460424 BCL9LQ86UU0 1499 aa32.62■■■□□ 2.81
ACAA1-212ENST00000460424 USP6P35125 1406 aa32.62■■■□□ 2.81
ACAA1-212ENST00000460424 CDK12Q9NYV4 1490 aaPredicted RBP32.61■■■□□ 2.81
ACAA1-212ENST00000460424 ATRNO75882 1429 aa32.61■■■□□ 2.81
ACAA1-212ENST00000460424 COL14A1Q05707 1796 aaKnown RBP32.61■■■□□ 2.81
ACAA1-212ENST00000460424 MON2Q7Z3U7 1717 aa32.6■■■□□ 2.81
ACAA1-212ENST00000460424 USP47Q96K76 1375 aa32.6■■■□□ 2.81
ACAA1-212ENST00000460424 TRPC5Q9UL62 973 aaPredicted RBP32.6■■■□□ 2.81
ACAA1-212ENST00000460424 BRD4O60885 1362 aaPredicted RBP32.59■■■□□ 2.81
ACAA1-212ENST00000460424 NRKQ7Z2Y5 1582 aa32.59■■■□□ 2.81
ACAA1-212ENST00000460424 ST20-MTHFSA0A0A6YYL1 179 aa32.58■■■□□ 2.81
ACAA1-212ENST00000460424 RBM6P78332 1123 aaKnown RBP32.58■■■□□ 2.81
ACAA1-212ENST00000460424 NRAPQ86VF7 1730 aa32.57■■■□□ 2.81
ACAA1-212ENST00000460424 NUTM2GQ5VZR2 741 aa32.57■■■□□ 2.8
ACAA1-212ENST00000460424 PIK3C2AO00443 1686 aa32.56■■■□□ 2.8
ACAA1-212ENST00000460424 RGS12O14924 1447 aa32.55■■■□□ 2.8
ACAA1-212ENST00000460424 ABTB2Q8N961 1025 aa32.55■■■□□ 2.8
ACAA1-212ENST00000460424 TESK2Q96S53 571 aa32.53■■■□□ 2.8
ACAA1-212ENST00000460424 UNC5CLQ8IV45 518 aa32.52■■■□□ 2.8
ACAA1-212ENST00000460424 CPSF1Q10570 1443 aaKnown RBP32.51■■■□□ 2.79
ACAA1-212ENST00000460424 SSH2Q76I76 1423 aa32.51■■■□□ 2.79
ACAA1-212ENST00000460424 FAM83GA6ND36 823 aa32.49■■■□□ 2.79
ACAA1-212ENST00000460424 ZNF692Q9BU19 519 aaPredicted RBP32.49■■■□□ 2.79
ACAA1-212ENST00000460424 GLI3P10071 1580 aa32.49■■■□□ 2.79
ACAA1-212ENST00000460424 SLC24A1O60721 1099 aa32.48■■■□□ 2.79
ACAA1-212ENST00000460424 USP19O94966 1318 aa32.48■■■□□ 2.79
ACAA1-212ENST00000460424 KTN1Q86UP2 1357 aaKnown RBP32.47■■■□□ 2.79
ACAA1-212ENST00000460424 NLRP13Q86W25 1043 aa32.47■■■□□ 2.79
ACAA1-212ENST00000460424 TMC1Q8TDI8 760 aa32.47■■■□□ 2.79
ACAA1-212ENST00000460424 CD163L1Q9NR16 1453 aa32.47■■■□□ 2.79
ACAA1-212ENST00000460424 PRDM11Q9NQV5 511 aa32.46■■■□□ 2.79
ACAA1-212ENST00000460424 KIAA0232Q92628 1395 aa32.45■■■□□ 2.79
ACAA1-212ENST00000460424 PUS7Q96PZ0 661 aaKnown RBP32.45■■■□□ 2.79
ACAA1-212ENST00000460424 GJD4Q96KN9 370 aaPredicted RBP32.44■■■□□ 2.78
ACAA1-212ENST00000460424 SLIT3O75094 1523 aa32.44■■■□□ 2.78
ACAA1-212ENST00000460424 TTC21BQ7Z4L5 1316 aa32.43■■■□□ 2.78
ACAA1-212ENST00000460424 BTG4Q9NY30 223 aa32.42■■■□□ 2.78
ACAA1-212ENST00000460424 NLRP6P59044 892 aa32.41■■■□□ 2.78
ACAA1-212ENST00000460424 ZC3H6P61129 1189 aaKnown RBP32.41■■■□□ 2.78
ACAA1-212ENST00000460424 TTC21AQ8NDW8 1320 aa32.41■■■□□ 2.78
ACAA1-212ENST00000460424 TMF1P82094 1093 aa32.4■■■□□ 2.78
ACAA1-212ENST00000460424 SLC12A5Q9H2X9 1139 aa32.4■■■□□ 2.78
ACAA1-212ENST00000460424 NINLQ9Y2I6 1382 aa32.4■■■□□ 2.78
ACAA1-212ENST00000460424 VPS72Q15906 364 aa32.39■■■□□ 2.78
ACAA1-212ENST00000460424 HDGFL2Q7Z4V5 671 aaPredicted RBP32.39■■■□□ 2.78
ACAA1-212ENST00000460424 USP54Q70EL1 1684 aa32.39■■■□□ 2.78
ACAA1-212ENST00000460424 LMO7Q8WWI1 1683 aa32.39■■■□□ 2.78
ACAA1-212ENST00000460424 CHRNA2Q15822 529 aa32.38■■■□□ 2.77
ACAA1-212ENST00000460424 CCDC9Q9Y3X0 531 aaKnown RBP32.38■■■□□ 2.77
ACAA1-212ENST00000460424 A0A1W2PP64 1363 aa32.37■■■□□ 2.77
ACAA1-212ENST00000460424 CPDO75976 1380 aa32.37■■■□□ 2.77
ACAA1-212ENST00000460424 GCP02774 474 aa32.36■■■□□ 2.77
ACAA1-212ENST00000460424 TERF2IPQ9NYB0 399 aa32.36■■■□□ 2.77
ACAA1-212ENST00000460424 BRWD3Q6RI45 1802 aa32.35■■■□□ 2.77
ACAA1-212ENST00000460424 EDC4Q6P2E9 1401 aaKnown RBP32.34■■■□□ 2.77
ACAA1-212ENST00000460424 MYOM1P52179 1685 aa32.33■■■□□ 2.77
ACAA1-212ENST00000460424 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.32■■■□□ 2.76
ACAA1-212ENST00000460424 CAMTA1Q9Y6Y1 1673 aa32.3■■■□□ 2.76
ACAA1-212ENST00000460424 CDCA8Q53HL2 280 aa32.29■■■□□ 2.76
ACAA1-212ENST00000460424 NFAT5O94916 1531 aa32.27■■■□□ 2.76
ACAA1-212ENST00000460424 ZBTB7CA1YPR0 619 aa32.27■■■□□ 2.76
ACAA1-212ENST00000460424 COL18A1P39060 1754 aa32.27■■■□□ 2.76
ACAA1-212ENST00000460424 STRN4Q9NRL3 753 aa32.26■■■□□ 2.75
ACAA1-212ENST00000460424 ANKRD36BQ8N2N9 1353 aa32.26■■■□□ 2.75
ACAA1-212ENST00000460424 RGPD5Q99666 1765 aa32.25■■■□□ 2.75
ACAA1-212ENST00000460424 USP31Q70CQ4 1352 aa32.25■■■□□ 2.75
ACAA1-212ENST00000460424 NME9Q86XW9 330 aa32.25■■■□□ 2.75
ACAA1-212ENST00000460424 KCNH5Q8NCM2 988 aa32.25■■■□□ 2.75
ACAA1-212ENST00000460424 LTN1O94822 1766 aa32.24■■■□□ 2.75
ACAA1-212ENST00000460424 EIF4G2P78344 907 aaKnown RBP eCLIP32.24■■■□□ 2.75
ACAA1-212ENST00000460424 SPATA31A5Q5VU36 1347 aa32.24■■■□□ 2.75
ACAA1-212ENST00000460424 SPATA31A7Q8IWB4 1347 aa32.24■■■□□ 2.75
ACAA1-212ENST00000460424 SOX12O15370 315 aa32.23■■■□□ 2.75
ACAA1-212ENST00000460424 UPF1Q92900 1129 aaKnown RBP eCLIP32.22■■■□□ 2.75
ACAA1-212ENST00000460424 ZRANB1Q9UGI0 708 aa32.22■■■□□ 2.75
ACAA1-212ENST00000460424 COL5A2P05997 1499 aaPredicted RBP32.22■■■□□ 2.75
ACAA1-212ENST00000460424 KIF20BQ96Q89 1820 aa32.21■■■□□ 2.75
ACAA1-212ENST00000460424 THSD7AQ9UPZ6 1657 aa32.21■■■□□ 2.75
ACAA1-212ENST00000460424 AATKQ6ZMQ8 1374 aa32.2■■■□□ 2.75
ACAA1-212ENST00000460424 A0A0G2JS52 829 aa32.2■■■□□ 2.75
ACAA1-212ENST00000460424 EVA1CP58658 441 aa32.2■■■□□ 2.75
ACAA1-212ENST00000460424 MYT1Q01538 1121 aa32.2■■■□□ 2.75
ACAA1-212ENST00000460424 SEPT12Q8IYM1 358 aa32.2■■■□□ 2.75
ACAA1-212ENST00000460424 OVOS2A0A0J9YW53 1432 aa32.19■■■□□ 2.74
ACAA1-212ENST00000460424 OVOS2Q6IE36 1432 aa32.19■■■□□ 2.74
ACAA1-212ENST00000460424 HSPA5P11021 654 aaKnown RBP32.19■■■□□ 2.74
ACAA1-212ENST00000460424 FAM98CQ17RN3 349 aaKnown RBP32.19■■■□□ 2.74
ACAA1-212ENST00000460424 SPATA31A1Q5TZJ5 1347 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms