RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 GJD4Q96KN9 370 aaPredicted RBP24.93■■□□□ 1.58
SCARNA2-201ENST00000458748 NWD2Q9ULI1 1742 aa24.92■■□□□ 1.58
SCARNA2-201ENST00000458748 NBPF8Q3BBV2 869 aa24.92■■□□□ 1.58
SCARNA2-201ENST00000458748 UNC5CLQ8IV45 518 aa24.92■■□□□ 1.58
SCARNA2-201ENST00000458748 ACEP12821 1306 aa24.91■■□□□ 1.58
SCARNA2-201ENST00000458748 PAK3O75914 559 aaPredicted RBP24.91■■□□□ 1.58
SCARNA2-201ENST00000458748 EVC2Q86UK5 1308 aa24.9■■□□□ 1.58
SCARNA2-201ENST00000458748 CARD11Q9BXL7 1154 aa24.9■■□□□ 1.58
SCARNA2-201ENST00000458748 PLCH1Q4KWH8 1693 aa24.89■■□□□ 1.58
SCARNA2-201ENST00000458748 PCGF6Q9BYE7 350 aa24.89■■□□□ 1.58
SCARNA2-201ENST00000458748 CRYBG1Q9Y4K1 1723 aa24.89■■□□□ 1.57
SCARNA2-201ENST00000458748 CLSPNQ9HAW4 1339 aa24.88■■□□□ 1.57
SCARNA2-201ENST00000458748 PPIP5K1Q6PFW1 1433 aa24.88■■□□□ 1.57
SCARNA2-201ENST00000458748 CABP2Q9NPB3 220 aa24.88■■□□□ 1.57
SCARNA2-201ENST00000458748 RALGAPBQ86X10 1494 aa24.87■■□□□ 1.57
SCARNA2-201ENST00000458748 BRD4O60885 1362 aaPredicted RBP24.86■■□□□ 1.57
SCARNA2-201ENST00000458748 GLI3P10071 1580 aa24.85■■□□□ 1.57
SCARNA2-201ENST00000458748 FAM83GA6ND36 823 aa24.85■■□□□ 1.57
SCARNA2-201ENST00000458748 COL14A1Q05707 1796 aaKnown RBP24.85■■□□□ 1.57
SCARNA2-201ENST00000458748 TIMELESSQ9UNS1 1208 aa24.83■■□□□ 1.57
SCARNA2-201ENST00000458748 SBNO2Q9Y2G9 1366 aa24.82■■□□□ 1.56
SCARNA2-201ENST00000458748 VPS72Q15906 364 aa24.82■■□□□ 1.56
SCARNA2-201ENST00000458748 PHRF1Q9P1Y6 1649 aaKnown RBP24.8■■□□□ 1.56
SCARNA2-201ENST00000458748 CABP1Q9NZU7 370 aa24.8■■□□□ 1.56
SCARNA2-201ENST00000458748 NRAPQ86VF7 1730 aa24.79■■□□□ 1.56
SCARNA2-201ENST00000458748 CCDC9Q9Y3X0 531 aaKnown RBP24.79■■□□□ 1.56
SCARNA2-201ENST00000458748 SLC24A1O60721 1099 aa24.78■■□□□ 1.56
SCARNA2-201ENST00000458748 ABTB2Q8N961 1025 aa24.78■■□□□ 1.56
SCARNA2-201ENST00000458748 BTG4Q9NY30 223 aa24.77■■□□□ 1.56
SCARNA2-201ENST00000458748 PRDM11Q9NQV5 511 aa24.76■■□□□ 1.55
SCARNA2-201ENST00000458748 USP6P35125 1406 aa24.76■■□□□ 1.55
SCARNA2-201ENST00000458748 NLRP13Q86W25 1043 aa24.75■■□□□ 1.55
SCARNA2-201ENST00000458748 SEPT12Q8IYM1 358 aa24.75■■□□□ 1.55
SCARNA2-201ENST00000458748 ONECUT3O60422 494 aaPredicted RBP24.74■■□□□ 1.55
SCARNA2-201ENST00000458748 NUTM2GQ5VZR2 741 aa24.74■■□□□ 1.55
SCARNA2-201ENST00000458748 ZNF692Q9BU19 519 aaPredicted RBP24.74■■□□□ 1.55
SCARNA2-201ENST00000458748 KIAA0232Q92628 1395 aa24.73■■□□□ 1.55
SCARNA2-201ENST00000458748 USP19O94966 1318 aa24.73■■□□□ 1.55
SCARNA2-201ENST00000458748 AKAP12Q02952 1782 aa24.72■■□□□ 1.55
SCARNA2-201ENST00000458748 CCDC125Q86Z20 511 aa24.72■■□□□ 1.55
SCARNA2-201ENST00000458748 BRWD3Q6RI45 1802 aa24.72■■□□□ 1.55
SCARNA2-201ENST00000458748 SSH2Q76I76 1423 aa24.71■■□□□ 1.55
SCARNA2-201ENST00000458748 CCER1Q8TC90 406 aaPredicted RBP24.71■■□□□ 1.55
SCARNA2-201ENST00000458748 NRKQ7Z2Y5 1582 aa24.71■■□□□ 1.55
SCARNA2-201ENST00000458748 CPDO75976 1380 aa24.69■■□□□ 1.54
SCARNA2-201ENST00000458748 EP400Q96L91 3159 aa24.69■■□□□ 1.54
SCARNA2-201ENST00000458748 ZC3H6P61129 1189 aaKnown RBP24.69■■□□□ 1.54
SCARNA2-201ENST00000458748 PUS7Q96PZ0 661 aaKnown RBP24.68■■□□□ 1.54
SCARNA2-201ENST00000458748 A0A0G2JS52 829 aa24.67■■□□□ 1.54
SCARNA2-201ENST00000458748 MYT1Q01538 1121 aa24.67■■□□□ 1.54
SCARNA2-201ENST00000458748 CPSF1Q10570 1443 aaKnown RBP24.67■■□□□ 1.54
SCARNA2-201ENST00000458748 SPATA31A5Q5VU36 1347 aa24.66■■□□□ 1.54
SCARNA2-201ENST00000458748 SPATA31A7Q8IWB4 1347 aa24.66■■□□□ 1.54
SCARNA2-201ENST00000458748 GCP02774 474 aa24.66■■□□□ 1.54
SCARNA2-201ENST00000458748 BLMP54132 1417 aaPredicted RBP24.66■■□□□ 1.54
SCARNA2-201ENST00000458748 NLRP6P59044 892 aa24.65■■□□□ 1.54
SCARNA2-201ENST00000458748 CHRNA2Q15822 529 aa24.65■■□□□ 1.54
SCARNA2-201ENST00000458748 FAM98CQ17RN3 349 aaKnown RBP24.65■■□□□ 1.54
SCARNA2-201ENST00000458748 KRT27Q7Z3Y8 459 aa24.65■■□□□ 1.54
SCARNA2-201ENST00000458748 PIK3C2AO00443 1686 aa24.65■■□□□ 1.54
SCARNA2-201ENST00000458748 TTC21AQ8NDW8 1320 aa24.64■■□□□ 1.54
SCARNA2-201ENST00000458748 ZRANB1Q9UGI0 708 aa24.64■■□□□ 1.54
SCARNA2-201ENST00000458748 SLIT3O75094 1523 aa24.64■■□□□ 1.53
SCARNA2-201ENST00000458748 TTC21BQ7Z4L5 1316 aa24.63■■□□□ 1.53
SCARNA2-201ENST00000458748 ST20-MTHFSA0A0A6YYL1 179 aa24.63■■□□□ 1.53
SCARNA2-201ENST00000458748 KTN1Q86UP2 1357 aaKnown RBP24.63■■□□□ 1.53
SCARNA2-201ENST00000458748 MON2Q7Z3U7 1717 aa24.63■■□□□ 1.53
SCARNA2-201ENST00000458748 LMO7Q8WWI1 1683 aa24.62■■□□□ 1.53
SCARNA2-201ENST00000458748 DEFB132Q7Z7B7 95 aa24.61■■□□□ 1.53
SCARNA2-201ENST00000458748 TMC1Q8TDI8 760 aa24.61■■□□□ 1.53
SCARNA2-201ENST00000458748 USP47Q96K76 1375 aa24.6■■□□□ 1.53
SCARNA2-201ENST00000458748 EVA1CP58658 441 aa24.6■■□□□ 1.53
SCARNA2-201ENST00000458748 HDGFL2Q7Z4V5 671 aaPredicted RBP24.6■■□□□ 1.53
SCARNA2-201ENST00000458748 TESK2Q96S53 571 aa24.6■■□□□ 1.53
SCARNA2-201ENST00000458748 SPATA31A1Q5TZJ5 1347 aa24.6■■□□□ 1.53
SCARNA2-201ENST00000458748 CAMTA1Q9Y6Y1 1673 aa24.59■■□□□ 1.53
SCARNA2-201ENST00000458748 SF3B2Q13435 895 aaKnown RBP24.59■■□□□ 1.53
SCARNA2-201ENST00000458748 STRN4Q9NRL3 753 aa24.59■■□□□ 1.53
SCARNA2-201ENST00000458748 TERF2IPQ9NYB0 399 aa24.59■■□□□ 1.53
SCARNA2-201ENST00000458748 NINLQ9Y2I6 1382 aa24.58■■□□□ 1.53
SCARNA2-201ENST00000458748 KCNH5Q8NCM2 988 aa24.58■■□□□ 1.53
SCARNA2-201ENST00000458748 THSD7AQ9UPZ6 1657 aa24.57■■□□□ 1.52
SCARNA2-201ENST00000458748 CD163L1Q9NR16 1453 aa24.57■■□□□ 1.52
SCARNA2-201ENST00000458748 AATKQ6ZMQ8 1374 aa24.56■■□□□ 1.52
SCARNA2-201ENST00000458748 TMF1P82094 1093 aa24.56■■□□□ 1.52
SCARNA2-201ENST00000458748 CDCA8Q53HL2 280 aa24.56■■□□□ 1.52
SCARNA2-201ENST00000458748 SLC12A5Q9H2X9 1139 aa24.55■■□□□ 1.52
SCARNA2-201ENST00000458748 FAM182BQ5T319 152 aa24.54■■□□□ 1.52
SCARNA2-201ENST00000458748 USP54Q70EL1 1684 aa24.53■■□□□ 1.52
SCARNA2-201ENST00000458748 BARGINQ6ZT62 677 aa24.53■■□□□ 1.52
SCARNA2-201ENST00000458748 COL5A2P05997 1499 aaPredicted RBP24.52■■□□□ 1.52
SCARNA2-201ENST00000458748 USP31Q70CQ4 1352 aa24.52■■□□□ 1.52
SCARNA2-201ENST00000458748 COL18A1P39060 1754 aa24.52■■□□□ 1.52
SCARNA2-201ENST00000458748 EDC4Q6P2E9 1401 aaKnown RBP24.52■■□□□ 1.52
SCARNA2-201ENST00000458748 LARP1Q6PKG0 1096 aaKnown RBP24.51■■□□□ 1.51
SCARNA2-201ENST00000458748 THRAP3Q9Y2W1 955 aaKnown RBP24.51■■□□□ 1.51
SCARNA2-201ENST00000458748 ARHGEF25Q86VW2 580 aa24.49■■□□□ 1.51
SCARNA2-201ENST00000458748 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.49■■□□□ 1.51
SCARNA2-201ENST00000458748 TCP11L2Q8N4U5 519 aa24.49■■□□□ 1.51
SCARNA2-201ENST00000458748 USP35Q9P2H5 1018 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms