RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 LOC105371045A0A1W2PR82 267 aa8.73□□□□□ -1.01
VPS8-214ENST00000458721 POTEMA6NI47 508 aa8.73□□□□□ -1.01
VPS8-214ENST00000458721 C14orf37Q86TY3 774 aa8.73□□□□□ -1.01
VPS8-214ENST00000458721 BOLA1Q9Y3E2 137 aa8.73□□□□□ -1.01
VPS8-214ENST00000458721 PTCH1Q13635 1447 aa8.72□□□□□ -1.01
VPS8-214ENST00000458721 NEXMIFQ5QGS0 1516 aa8.72□□□□□ -1.01
VPS8-214ENST00000458721 FAM50AQ14320 339 aaKnown RBP8.72□□□□□ -1.01
VPS8-214ENST00000458721 MEX3CQ5U5Q3 659 aaKnown RBP8.72□□□□□ -1.01
VPS8-214ENST00000458721 POTEGQ6S5H5 508 aa8.72□□□□□ -1.01
VPS8-214ENST00000458721 BCL11BQ9C0K0 894 aaPredicted RBP8.72□□□□□ -1.01
VPS8-214ENST00000458721 PTPRUQ92729 1446 aa8.71□□□□□ -1.01
VPS8-214ENST00000458721 RGL2O15211 777 aa8.71□□□□□ -1.02
VPS8-214ENST00000458721 RBM33Q96EV2 1170 aaKnown RBP8.71□□□□□ -1.02
VPS8-214ENST00000458721 CLTCL1P53675 1640 aa8.7□□□□□ -1.02
VPS8-214ENST00000458721 COL22A1Q8NFW1 1626 aaPredicted RBP8.7□□□□□ -1.02
VPS8-214ENST00000458721 SNPHO15079 494 aa8.7□□□□□ -1.02
VPS8-214ENST00000458721 LCE2DQ5TA82 110 aaPredicted RBP8.7□□□□□ -1.02
VPS8-214ENST00000458721 BRINP3Q76B58 766 aa8.7□□□□□ -1.02
VPS8-214ENST00000458721 STK24Q9Y6E0 443 aa8.7□□□□□ -1.02
VPS8-214ENST00000458721 NUP155O75694 1391 aa8.7□□□□□ -1.02
VPS8-214ENST00000458721 STK25O00506 426 aa8.69□□□□□ -1.02
VPS8-214ENST00000458721 AMOTL2Q9Y2J4 779 aa8.69□□□□□ -1.02
VPS8-214ENST00000458721 CDC42BPGQ6DT37 1551 aa8.69□□□□□ -1.02
VPS8-214ENST00000458721 CHGAP10645 457 aaKnown RBP8.68□□□□□ -1.02
VPS8-214ENST00000458721 RXRBP28702 533 aa8.68□□□□□ -1.02
VPS8-214ENST00000458721 UPF1Q92900 1129 aaKnown RBP eCLIP8.68□□□□□ -1.02
VPS8-214ENST00000458721 LRRC59Q96AG4 307 aaKnown RBP8.68□□□□□ -1.02
VPS8-214ENST00000458721 PLSCR2Q9NRY7 297 aa8.68□□□□□ -1.02
VPS8-214ENST00000458721 MARF1Q9Y4F3 1742 aaKnown RBP8.68□□□□□ -1.02
VPS8-214ENST00000458721 RGS12O14924 1447 aa8.67□□□□□ -1.02
VPS8-214ENST00000458721 PNPLA6Q8IY17 1366 aa8.67□□□□□ -1.02
VPS8-214ENST00000458721 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.67□□□□□ -1.02
VPS8-214ENST00000458721 PHF8Q9UPP1 1060 aa8.67□□□□□ -1.02
VPS8-214ENST00000458721 PPLO60437 1756 aa8.66□□□□□ -1.02
VPS8-214ENST00000458721 AFF2P51816 1311 aa8.66□□□□□ -1.02
VPS8-214ENST00000458721 TMEM121BQ9BXQ6 578 aaPredicted RBP8.66□□□□□ -1.02
VPS8-214ENST00000458721 C1orf167Q5SNV9 1468 aa8.65□□□□□ -1.02
VPS8-214ENST00000458721 HFM1A2PYH4 1435 aa8.65□□□□□ -1.02
VPS8-214ENST00000458721 METP08581 1390 aa8.65□□□□□ -1.02
VPS8-214ENST00000458721 NLRP6P59044 892 aa8.65□□□□□ -1.02
VPS8-214ENST00000458721 MS4A4AQ96JQ5 239 aa8.65□□□□□ -1.02
VPS8-214ENST00000458721 ATAD2Q6PL18 1390 aa8.64□□□□□ -1.03
VPS8-214ENST00000458721 KNDC1Q76NI1 1749 aa8.64□□□□□ -1.03
VPS8-214ENST00000458721 ST18O60284 1047 aa8.64□□□□□ -1.03
VPS8-214ENST00000458721 RBM6P78332 1123 aaKnown RBP8.64□□□□□ -1.03
VPS8-214ENST00000458721 TRIM52Q96A61 297 aa8.64□□□□□ -1.03
VPS8-214ENST00000458721 KIF1AQ12756 1690 aa8.63□□□□□ -1.03
VPS8-214ENST00000458721 MICALL2Q8IY33 904 aa8.63□□□□□ -1.03
VPS8-214ENST00000458721 NGLY1Q96IV0 654 aa8.63□□□□□ -1.03
VPS8-214ENST00000458721 PCDH10Q9P2E7 1040 aa8.63□□□□□ -1.03
VPS8-214ENST00000458721 MYOM2P54296 1465 aa8.63□□□□□ -1.03
VPS8-214ENST00000458721 SOS2Q07890 1332 aaPredicted RBP8.62□□□□□ -1.03
VPS8-214ENST00000458721 NUTM2DQ5VT03 806 aaPredicted RBP8.62□□□□□ -1.03
VPS8-214ENST00000458721 FBXO22Q8NEZ5 403 aa8.62□□□□□ -1.03
VPS8-214ENST00000458721 IFT172Q9UG01 1749 aa8.62□□□□□ -1.03
VPS8-214ENST00000458721 TECPR2O15040 1411 aa8.62□□□□□ -1.03
VPS8-214ENST00000458721 RRBP1Q9P2E9 1410 aaKnown RBP8.62□□□□□ -1.03
VPS8-214ENST00000458721 RPGRIP1LQ68CZ1 1315 aa8.61□□□□□ -1.03
VPS8-214ENST00000458721 ZNF326Q5BKZ1 582 aaKnown RBP8.61□□□□□ -1.03
VPS8-214ENST00000458721 ATRNO75882 1429 aa8.61□□□□□ -1.03
VPS8-214ENST00000458721 NAIPQ13075 1403 aa8.61□□□□□ -1.03
VPS8-214ENST00000458721 EP400Q96L91 3159 aa8.61□□□□□ -1.03
VPS8-214ENST00000458721 PXDNQ92626 1479 aa8.6□□□□□ -1.03
VPS8-214ENST00000458721 NUTM2BA6NNL0 878 aaPredicted RBP8.6□□□□□ -1.03
VPS8-214ENST00000458721 NUTM2EB1AL46 878 aaPredicted RBP8.6□□□□□ -1.03
VPS8-214ENST00000458721 NUTM2AQ8IVF1 878 aaPredicted RBP8.6□□□□□ -1.03
VPS8-214ENST00000458721 C8orf37Q96NL8 207 aa8.6□□□□□ -1.03
VPS8-214ENST00000458721 MFRPQ9BY79 579 aa8.6□□□□□ -1.03
VPS8-214ENST00000458721 ROBO2Q9HCK4 1378 aa8.6□□□□□ -1.03
VPS8-214ENST00000458721 NPHP3Q7Z494 1330 aa8.59□□□□□ -1.03
VPS8-214ENST00000458721 FNBP4Q8N3X1 1017 aaPredicted RBP8.59□□□□□ -1.03
VPS8-214ENST00000458721 QTRT2Q9H974 415 aaKnown RBP8.59□□□□□ -1.03
VPS8-214ENST00000458721 TRPC5Q9UL62 973 aaPredicted RBP8.59□□□□□ -1.03
VPS8-214ENST00000458721 FMN2Q9NZ56 1722 aa8.59□□□□□ -1.03
VPS8-214ENST00000458721 LRPPRCP42704 1394 aaKnown RBP8.59□□□□□ -1.03
VPS8-214ENST00000458721 NWD2Q9ULI1 1742 aa8.58□□□□□ -1.04
VPS8-214ENST00000458721 CCDC125Q86Z20 511 aa8.58□□□□□ -1.04
VPS8-214ENST00000458721 USP32Q8NFA0 1604 aa8.58□□□□□ -1.04
VPS8-214ENST00000458721 SRCAPQ6ZRS2 3230 aa8.57□□□□□ -1.04
VPS8-214ENST00000458721 CCDC144AA2RUR9 1427 aa8.56□□□□□ -1.04
VPS8-214ENST00000458721 LRP5O75197 1615 aa8.56□□□□□ -1.04
VPS8-214ENST00000458721 HS6ST3Q8IZP7 471 aa8.56□□□□□ -1.04
VPS8-214ENST00000458721 USP21Q9UK80 565 aa8.56□□□□□ -1.04
VPS8-214ENST00000458721 ABCA3Q99758 1704 aa8.56□□□□□ -1.04
VPS8-214ENST00000458721 ANKRD30BQ9BXX2 1392 aa8.56□□□□□ -1.04
VPS8-214ENST00000458721 BCL9LQ86UU0 1499 aa8.56□□□□□ -1.04
VPS8-214ENST00000458721 PLCH1Q4KWH8 1693 aa8.55□□□□□ -1.04
VPS8-214ENST00000458721 PIK3C2GO75747 1445 aa8.54□□□□□ -1.04
VPS8-214ENST00000458721 SLIT2O94813 1529 aa8.54□□□□□ -1.04
VPS8-214ENST00000458721 GLI3P10071 1580 aa8.54□□□□□ -1.04
VPS8-214ENST00000458721 ADAMTS2O95450 1211 aa8.54□□□□□ -1.04
VPS8-214ENST00000458721 BLMP54132 1417 aaPredicted RBP8.54□□□□□ -1.04
VPS8-214ENST00000458721 SPATA31E1Q6ZUB1 1445 aa8.54□□□□□ -1.04
VPS8-214ENST00000458721 ACIN1Q9UKV3 1341 aaKnown RBP8.54□□□□□ -1.04
VPS8-214ENST00000458721 ADGRB2O60241 1585 aa8.53□□□□□ -1.04
VPS8-214ENST00000458721 ABCC11Q96J66 1382 aa8.53□□□□□ -1.04
VPS8-214ENST00000458721 ITGAEP38570 1179 aa8.53□□□□□ -1.04
VPS8-214ENST00000458721 DOK7Q18PE1 504 aa8.53□□□□□ -1.04
VPS8-214ENST00000458721 TMEM92Q6UXU6 159 aa8.53□□□□□ -1.04
VPS8-214ENST00000458721 DDX17Q92841 729 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms