RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 PRR7Q8TB68 274 aa8.9□□□□□ -0.98
UBDP1-202ENST00000457888 WDR4P57081 412 aaKnown RBP8.89□□□□□ -0.99
UBDP1-202ENST00000457888 KDM2AQ9Y2K7 1162 aa8.89□□□□□ -0.99
UBDP1-202ENST00000457888 MOXD2PA6NHM9 499 aa8.88□□□□□ -0.99
UBDP1-202ENST00000457888 SOBPA7XYQ1 873 aa8.88□□□□□ -0.99
UBDP1-202ENST00000457888 VSIG8P0DPA2 414 aa8.88□□□□□ -0.99
UBDP1-202ENST00000457888 SSTR3P32745 418 aaPredicted RBP8.88□□□□□ -0.99
UBDP1-202ENST00000457888 DESI1Q6ICB0 168 aa8.88□□□□□ -0.99
UBDP1-202ENST00000457888 LOC100996750A0A140TA64 210 aa8.87□□□□□ -0.99
UBDP1-202ENST00000457888 SPDYE5A6NIY4 337 aa8.87□□□□□ -0.99
UBDP1-202ENST00000457888 HAP1P54257 671 aaPredicted RBP8.87□□□□□ -0.99
UBDP1-202ENST00000457888 MTMR2Q13614 643 aa8.87□□□□□ -0.99
UBDP1-202ENST00000457888 FAM174AQ8TBP5 190 aa8.87□□□□□ -0.99
UBDP1-202ENST00000457888 KLF16Q9BXK1 252 aaPredicted RBP8.87□□□□□ -0.99
UBDP1-202ENST00000457888 KRTAP4-6Q9BYQ5 205 aa8.87□□□□□ -0.99
UBDP1-202ENST00000457888 CTHP32929 405 aa8.84□□□□□ -0.99
UBDP1-202ENST00000457888 CDK15Q96Q40 435 aa8.83□□□□□ -1
UBDP1-202ENST00000457888 MAN1A2O60476 641 aa8.82□□□□□ -1
UBDP1-202ENST00000457888 ZIC2O95409 532 aaPredicted RBP8.82□□□□□ -1
UBDP1-202ENST00000457888 ARID5BQ14865 1188 aa8.82□□□□□ -1
UBDP1-202ENST00000457888 LYPD8Q6UX82 237 aa8.82□□□□□ -1
UBDP1-202ENST00000457888 TTLL12Q14166 644 aaPredicted RBP8.81□□□□□ -1
UBDP1-202ENST00000457888 FOXJ1Q92949 421 aa8.81□□□□□ -1
UBDP1-202ENST00000457888 ZFAND3Q9H8U3 227 aa8.81□□□□□ -1
UBDP1-202ENST00000457888 C6orf118Q5T5N4 469 aa8.8□□□□□ -1
UBDP1-202ENST00000457888 ITPKCQ96DU7 683 aa8.8□□□□□ -1
UBDP1-202ENST00000457888 PPFIA3O75145 1194 aa8.79□□□□□ -1
UBDP1-202ENST00000457888 NR3C2P08235 984 aa8.79□□□□□ -1
UBDP1-202ENST00000457888 GJA5P36382 358 aa8.79□□□□□ -1
UBDP1-202ENST00000457888 NR5A1Q13285 461 aa8.79□□□□□ -1
UBDP1-202ENST00000457888 KCNMA1Q12791 1236 aa8.78□□□□□ -1
UBDP1-202ENST00000457888 BEGAINQ9BUH8 593 aa8.78□□□□□ -1
UBDP1-202ENST00000457888 MAP10Q9P2G4 905 aa8.78□□□□□ -1
UBDP1-202ENST00000457888 CFAP99D6REC4 459 aa8.77□□□□□ -1.01
UBDP1-202ENST00000457888 UPP2O95045 317 aa8.77□□□□□ -1.01
UBDP1-202ENST00000457888 F12P00748 615 aaPredicted RBP8.77□□□□□ -1.01
UBDP1-202ENST00000457888 BMP2P12643 396 aa8.77□□□□□ -1.01
UBDP1-202ENST00000457888 SUZ12Q15022 739 aaKnown RBP8.77□□□□□ -1.01
UBDP1-202ENST00000457888 RSBN1LQ6PCB5 846 aaPredicted RBP8.77□□□□□ -1.01
UBDP1-202ENST00000457888 GIGYF2Q6Y7W6 1299 aaKnown RBP8.77□□□□□ -1.01
UBDP1-202ENST00000457888 GRM5P41594 1212 aa8.76□□□□□ -1.01
UBDP1-202ENST00000457888 AGERQ15109 404 aa8.76□□□□□ -1.01
UBDP1-202ENST00000457888 AMHR2Q16671 573 aa8.76□□□□□ -1.01
UBDP1-202ENST00000457888 SPTLC1O15269 473 aa8.75□□□□□ -1.01
UBDP1-202ENST00000457888 DIXDC1Q155Q3 683 aa8.75□□□□□ -1.01
UBDP1-202ENST00000457888 C4orf48Q5BLP8 95 aa8.75□□□□□ -1.01
UBDP1-202ENST00000457888 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.75□□□□□ -1.01
UBDP1-202ENST00000457888 BPHLQ86WA6 291 aaPredicted RBP8.75□□□□□ -1.01
UBDP1-202ENST00000457888 LINC00528Q8N1L1 170 aa8.75□□□□□ -1.01
UBDP1-202ENST00000457888 MEIOBQ8N635 442 aa8.75□□□□□ -1.01
UBDP1-202ENST00000457888 TBC1D2Q9BYX2 928 aa8.75□□□□□ -1.01
UBDP1-202ENST00000457888 PCDHB15Q9Y5E8 787 aa8.75□□□□□ -1.01
UBDP1-202ENST00000457888 GSK3AP49840 483 aa8.74□□□□□ -1.01
UBDP1-202ENST00000457888 KCTD17Q8N5Z5 321 aa8.74□□□□□ -1.01
UBDP1-202ENST00000457888 ZBTB3Q9H5J0 574 aa8.74□□□□□ -1.01
UBDP1-202ENST00000457888 HRCP23327 699 aa8.73□□□□□ -1.01
UBDP1-202ENST00000457888 DNMT3LQ9UJW3 386 aa8.73□□□□□ -1.01
UBDP1-202ENST00000457888 SOS2Q07890 1332 aaPredicted RBP8.73□□□□□ -1.01
UBDP1-202ENST00000457888 BARGINQ6ZT62 677 aa8.72□□□□□ -1.01
UBDP1-202ENST00000457888 PRPF38BQ5VTL8 546 aaKnown RBP8.71□□□□□ -1.02
UBDP1-202ENST00000457888 TMEM151AQ8N4L1 468 aa8.71□□□□□ -1.02
UBDP1-202ENST00000457888 PER1O15534 1290 aaPredicted RBP8.69□□□□□ -1.02
UBDP1-202ENST00000457888 FSHRP23945 695 aa8.69□□□□□ -1.02
UBDP1-202ENST00000457888 KRT76Q01546 638 aa8.69□□□□□ -1.02
UBDP1-202ENST00000457888 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.69□□□□□ -1.02
UBDP1-202ENST00000457888 VSIG10Q8N0Z9 540 aa8.69□□□□□ -1.02
UBDP1-202ENST00000457888 CABLES1Q8TDN4 633 aa8.69□□□□□ -1.02
UBDP1-202ENST00000457888 TSEN34Q9BSV6 310 aaKnown RBP8.69□□□□□ -1.02
UBDP1-202ENST00000457888 C1QTNF2Q9BXJ5 285 aa8.69□□□□□ -1.02
UBDP1-202ENST00000457888 ZMYND10O75800 440 aa8.68□□□□□ -1.02
UBDP1-202ENST00000457888 GDF11O95390 407 aa8.68□□□□□ -1.02
UBDP1-202ENST00000457888 RASSF7Q02833 373 aa8.68□□□□□ -1.02
UBDP1-202ENST00000457888 RIC3Q7Z5B4 369 aa8.68□□□□□ -1.02
UBDP1-202ENST00000457888 GPR161Q8N6U8 529 aaKnown RBP8.68□□□□□ -1.02
UBDP1-202ENST00000457888 ARMC2Q8NEN0 867 aa8.68□□□□□ -1.02
UBDP1-202ENST00000457888 CNTNAP3BQ96NU0 1288 aa8.68□□□□□ -1.02
UBDP1-202ENST00000457888 CNTNAP3Q9BZ76 1288 aa8.68□□□□□ -1.02
UBDP1-202ENST00000457888 MAP4K5Q9Y4K4 846 aa8.68□□□□□ -1.02
UBDP1-202ENST00000457888 RNF225M0QZC1 329 aaPredicted RBP8.67□□□□□ -1.02
UBDP1-202ENST00000457888 VASH1Q7L8A9 365 aaPredicted RBP8.67□□□□□ -1.02
UBDP1-202ENST00000457888 SH3RF1Q7Z6J0 888 aa8.67□□□□□ -1.02
UBDP1-202ENST00000457888 ADAMTS8Q9UP79 889 aa8.67□□□□□ -1.02
UBDP1-202ENST00000457888 EMILIN1Q9Y6C2 1016 aa8.67□□□□□ -1.02
UBDP1-202ENST00000457888 TTLL8A6PVC2 850 aa8.66□□□□□ -1.02
UBDP1-202ENST00000457888 CSPP1Q1MSJ5 1256 aa8.66□□□□□ -1.02
UBDP1-202ENST00000457888 NBPF14Q5TI25 921 aa8.66□□□□□ -1.02
UBDP1-202ENST00000457888 PARP9Q8IXQ6 854 aa8.66□□□□□ -1.02
UBDP1-202ENST00000457888 TRMT44Q8IYL2 757 aaKnown RBP8.66□□□□□ -1.02
UBDP1-202ENST00000457888 TSC1Q92574 1164 aa8.66□□□□□ -1.02
UBDP1-202ENST00000457888 PTSQ03393 145 aa8.65□□□□□ -1.02
UBDP1-202ENST00000457888 CCDC116Q8IYX3 515 aa8.65□□□□□ -1.02
UBDP1-202ENST00000457888 SH3BP5LQ7L8J4 393 aa8.64□□□□□ -1.03
UBDP1-202ENST00000457888 COL25A1Q9BXS0 654 aaPredicted RBP8.64□□□□□ -1.03
UBDP1-202ENST00000457888 MAGEB6P1A0A0J9YX57 407 aa8.63□□□□□ -1.03
UBDP1-202ENST00000457888 NANOS1Q8WY41 292 aaKnown RBP8.63□□□□□ -1.03
UBDP1-202ENST00000457888 FIGNL2A6NMB9 653 aa8.62□□□□□ -1.03
UBDP1-202ENST00000457888 NUTM2BA6NNL0 878 aaPredicted RBP8.62□□□□□ -1.03
UBDP1-202ENST00000457888 NUTM2EB1AL46 878 aaPredicted RBP8.62□□□□□ -1.03
UBDP1-202ENST00000457888 NUTM2DQ5VT03 806 aaPredicted RBP8.62□□□□□ -1.03
UBDP1-202ENST00000457888 NUTM2AQ8IVF1 878 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms