RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 A0A1W2PP64 1363 aa16.34■□□□□ 0.21
TRAPPC12-212ENST00000457845 XPCQ01831 940 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC12-212ENST00000457845 SPATA31A3Q5VYP0 1347 aa16.33■□□□□ 0.2
TRAPPC12-212ENST00000457845 TNS3Q68CZ2 1445 aa16.32■□□□□ 0.2
TRAPPC12-212ENST00000457845 USP54Q70EL1 1684 aa16.32■□□□□ 0.2
TRAPPC12-212ENST00000457845 HDGFL2Q7Z4V5 671 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC12-212ENST00000457845 KTN1Q86UP2 1357 aaKnown RBP16.32■□□□□ 0.2
TRAPPC12-212ENST00000457845 CRYBG1Q9Y4K1 1723 aa16.32■□□□□ 0.2
TRAPPC12-212ENST00000457845 MARF1Q9Y4F3 1742 aaKnown RBP16.31■□□□□ 0.2
TRAPPC12-212ENST00000457845 PIK3C2AO00443 1686 aa16.3■□□□□ 0.2
TRAPPC12-212ENST00000457845 EDC4Q6P2E9 1401 aaKnown RBP16.3■□□□□ 0.2
TRAPPC12-212ENST00000457845 JCADQ9P266 1359 aa16.3■□□□□ 0.2
TRAPPC12-212ENST00000457845 PNPLA6Q8IY17 1366 aa16.29■□□□□ 0.2
TRAPPC12-212ENST00000457845 TTC21BQ7Z4L5 1316 aa16.29■□□□□ 0.2
TRAPPC12-212ENST00000457845 ABCA3Q99758 1704 aa16.29■□□□□ 0.2
TRAPPC12-212ENST00000457845 POLR3GLQ9BT43 218 aa16.29■□□□□ 0.2
TRAPPC12-212ENST00000457845 KIF20BQ96Q89 1820 aa16.29■□□□□ 0.2
TRAPPC12-212ENST00000457845 ARHGEF10O15013 1369 aa16.28■□□□□ 0.2
TRAPPC12-212ENST00000457845 TTC21AQ8NDW8 1320 aa16.28■□□□□ 0.2
TRAPPC12-212ENST00000457845 MED1Q15648 1581 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC12-212ENST00000457845 CARD14Q9BXL6 1004 aa16.27■□□□□ 0.2
TRAPPC12-212ENST00000457845 PANK3Q9H999 370 aa16.26■□□□□ 0.19
TRAPPC12-212ENST00000457845 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC12-212ENST00000457845 PHRF1Q9P1Y6 1649 aaKnown RBP16.25■□□□□ 0.19
TRAPPC12-212ENST00000457845 ANKRD26Q9UPS8 1709 aa16.25■□□□□ 0.19
TRAPPC12-212ENST00000457845 USP31Q70CQ4 1352 aa16.25■□□□□ 0.19
TRAPPC12-212ENST00000457845 ABTB2Q8N961 1025 aa16.24■□□□□ 0.19
TRAPPC12-212ENST00000457845 SPATA31A6Q5VVP1 1343 aa16.23■□□□□ 0.19
TRAPPC12-212ENST00000457845 NSD3Q9BZ95 1437 aa16.23■□□□□ 0.19
TRAPPC12-212ENST00000457845 ZNF316A6NFI3 1004 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC12-212ENST00000457845 PER1O15534 1290 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC12-212ENST00000457845 SLIT3O75094 1523 aa16.22■□□□□ 0.19
TRAPPC12-212ENST00000457845 USP19O94966 1318 aa16.21■□□□□ 0.19
TRAPPC12-212ENST00000457845 FYB1O15117 783 aa16.21■□□□□ 0.19
TRAPPC12-212ENST00000457845 LMOD2Q6P5Q4 547 aa16.21■□□□□ 0.19
TRAPPC12-212ENST00000457845 NLRP13Q86W25 1043 aa16.21■□□□□ 0.19
TRAPPC12-212ENST00000457845 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.21■□□□□ 0.19
TRAPPC12-212ENST00000457845 OVOS2A0A0J9YW53 1432 aa16.2■□□□□ 0.18
TRAPPC12-212ENST00000457845 OVOS2Q6IE36 1432 aa16.2■□□□□ 0.18
TRAPPC12-212ENST00000457845 NME9Q86XW9 330 aa16.2■□□□□ 0.18
TRAPPC12-212ENST00000457845 NLRP6P59044 892 aa16.19■□□□□ 0.18
TRAPPC12-212ENST00000457845 LRP6O75581 1613 aa16.19■□□□□ 0.18
TRAPPC12-212ENST00000457845 NUTM2GQ5VZR2 741 aa16.18■□□□□ 0.18
TRAPPC12-212ENST00000457845 CABLES1Q8TDN4 633 aa16.18■□□□□ 0.18
TRAPPC12-212ENST00000457845 ZRANB1Q9UGI0 708 aa16.18■□□□□ 0.18
TRAPPC12-212ENST00000457845 CGNL1Q0VF96 1302 aa16.18■□□□□ 0.18
TRAPPC12-212ENST00000457845 MAP2P11137 1827 aaKnown RBP16.17■□□□□ 0.18
TRAPPC12-212ENST00000457845 NSD2O96028 1365 aa16.16■□□□□ 0.18
TRAPPC12-212ENST00000457845 NPC1L1Q9UHC9 1359 aa16.16■□□□□ 0.18
TRAPPC12-212ENST00000457845 LTN1O94822 1766 aa16.16■□□□□ 0.18
TRAPPC12-212ENST00000457845 NFAT5O94916 1531 aa16.16■□□□□ 0.18
TRAPPC12-212ENST00000457845 AMER1Q5JTC6 1135 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC12-212ENST00000457845 KNSTRNQ9Y448 316 aa16.16■□□□□ 0.18
TRAPPC12-212ENST00000457845 GCP02774 474 aa16.15■□□□□ 0.18
TRAPPC12-212ENST00000457845 COL18A1P39060 1754 aa16.14■□□□□ 0.17
TRAPPC12-212ENST00000457845 DDX10Q13206 875 aaKnown RBP16.14■□□□□ 0.17
TRAPPC12-212ENST00000457845 KCNH5Q8NCM2 988 aa16.14■□□□□ 0.17
TRAPPC12-212ENST00000457845 COG3Q96JB2 828 aa16.14■□□□□ 0.17
TRAPPC12-212ENST00000457845 GGNBP2Q9H3C7 697 aa16.14■□□□□ 0.17
TRAPPC12-212ENST00000457845 COL14A1Q05707 1796 aaKnown RBP16.13■□□□□ 0.17
TRAPPC12-212ENST00000457845 NUTM2BA6NNL0 878 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC12-212ENST00000457845 NUTM2EB1AL46 878 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC12-212ENST00000457845 NUTM2AQ8IVF1 878 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC12-212ENST00000457845 CPDO75976 1380 aa16.13■□□□□ 0.17
TRAPPC12-212ENST00000457845 NWD2Q9ULI1 1742 aa16.12■□□□□ 0.17
TRAPPC12-212ENST00000457845 RGPD5Q99666 1765 aa16.12■□□□□ 0.17
TRAPPC12-212ENST00000457845 PLCH1Q4KWH8 1693 aa16.11■□□□□ 0.17
TRAPPC12-212ENST00000457845 LMO7Q8WWI1 1683 aa16.11■□□□□ 0.17
TRAPPC12-212ENST00000457845 HAP1P54257 671 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC12-212ENST00000457845 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.1■□□□□ 0.17
TRAPPC12-212ENST00000457845 ABCC6O95255 1503 aa16.09■□□□□ 0.17
TRAPPC12-212ENST00000457845 PLEKHG5O94827 1062 aa16.09■□□□□ 0.17
TRAPPC12-212ENST00000457845 ADAMTS2O95450 1211 aa16.09■□□□□ 0.17
TRAPPC12-212ENST00000457845 ARHGEF25Q86VW2 580 aa16.09■□□□□ 0.17
TRAPPC12-212ENST00000457845 AATKQ6ZMQ8 1374 aa16.09■□□□□ 0.17
TRAPPC12-212ENST00000457845 KIAA0232Q92628 1395 aa16.09■□□□□ 0.17
TRAPPC12-212ENST00000457845 SLIT2O94813 1529 aa16.09■□□□□ 0.17
TRAPPC12-212ENST00000457845 NRAPQ86VF7 1730 aa16.08■□□□□ 0.17
TRAPPC12-212ENST00000457845 FAM83GA6ND36 823 aa16.08■□□□□ 0.16
TRAPPC12-212ENST00000457845 ZC3H6P61129 1189 aaKnown RBP16.08■□□□□ 0.16
TRAPPC12-212ENST00000457845 FNBP4Q8N3X1 1017 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC12-212ENST00000457845 PEAK1Q9H792 1746 aa16.06■□□□□ 0.16
TRAPPC12-212ENST00000457845 CAMTA1Q9Y6Y1 1673 aa16.05■□□□□ 0.16
TRAPPC12-212ENST00000457845 FBLN1P23142 703 aa16.05■□□□□ 0.16
TRAPPC12-212ENST00000457845 CC2D1BQ5T0F9 858 aaKnown RBP16.05■□□□□ 0.16
TRAPPC12-212ENST00000457845 MORC1Q86VD1 984 aa16.05■□□□□ 0.16
TRAPPC12-212ENST00000457845 PRDM11Q9NQV5 511 aa16.05■□□□□ 0.16
TRAPPC12-212ENST00000457845 BCL9LQ86UU0 1499 aa16.04■□□□□ 0.16
TRAPPC12-212ENST00000457845 KIF24Q5T7B8 1368 aa16.04■□□□□ 0.16
TRAPPC12-212ENST00000457845 SOX12O15370 315 aa16.04■□□□□ 0.16
TRAPPC12-212ENST00000457845 MEX3CQ5U5Q3 659 aaKnown RBP16.04■□□□□ 0.16
TRAPPC12-212ENST00000457845 NGLY1Q96IV0 654 aa16.04■□□□□ 0.16
TRAPPC12-212ENST00000457845 C8orf37Q96NL8 207 aa16.04■□□□□ 0.16
TRAPPC12-212ENST00000457845 MAP3K19Q56UN5 1328 aa16.03■□□□□ 0.16
TRAPPC12-212ENST00000457845 CHRNA2Q15822 529 aa16.03■□□□□ 0.16
TRAPPC12-212ENST00000457845 SMG6Q86US8 1419 aaKnown RBP16.02■□□□□ 0.16
TRAPPC12-212ENST00000457845 RTL1A6NKG5 1358 aa16.01■□□□□ 0.15
TRAPPC12-212ENST00000457845 PARD3Q8TEW0 1356 aa16.01■□□□□ 0.15
TRAPPC12-212ENST00000457845 AFF2P51816 1311 aa16.01■□□□□ 0.15
TRAPPC12-212ENST00000457845 RRS1Q15050 365 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms