RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 USP47Q96K76 1375 aa14.19□□□□□ -0.14
RFX3-210ENST00000457373 ACEP12821 1306 aa14.18□□□□□ -0.14
RFX3-210ENST00000457373 SPATA31A3Q5VYP0 1347 aa14.18□□□□□ -0.14
RFX3-210ENST00000457373 PPIP5K1Q6PFW1 1433 aa14.18□□□□□ -0.14
RFX3-210ENST00000457373 CABP1Q9NZU7 370 aa14.18□□□□□ -0.14
RFX3-210ENST00000457373 PLEKHG3A1L390 1219 aa14.17□□□□□ -0.14
RFX3-210ENST00000457373 PAK3O75914 559 aaPredicted RBP14.17□□□□□ -0.14
RFX3-210ENST00000457373 SBNO2Q9Y2G9 1366 aa14.17□□□□□ -0.14
RFX3-210ENST00000457373 LRP6O75581 1613 aa14.16□□□□□ -0.14
RFX3-210ENST00000457373 MKRN4PQ13434 485 aaPredicted RBP14.16□□□□□ -0.14
RFX3-210ENST00000457373 PROM2Q8N271 834 aa14.16□□□□□ -0.14
RFX3-210ENST00000457373 TESK2Q96S53 571 aa14.16□□□□□ -0.14
RFX3-210ENST00000457373 SBNO1A3KN83 1393 aa14.15□□□□□ -0.14
RFX3-210ENST00000457373 TRPM3Q9HCF6 1732 aaPredicted RBP14.15□□□□□ -0.14
RFX3-210ENST00000457373 TNS3Q68CZ2 1445 aa14.15□□□□□ -0.14
RFX3-210ENST00000457373 POLR3AO14802 1390 aaPredicted RBP14.14□□□□□ -0.15
RFX3-210ENST00000457373 ADAMTS2O95450 1211 aa14.14□□□□□ -0.15
RFX3-210ENST00000457373 TMC1Q8TDI8 760 aa14.14□□□□□ -0.15
RFX3-210ENST00000457373 COL22A1Q8NFW1 1626 aaPredicted RBP14.14□□□□□ -0.15
RFX3-210ENST00000457373 ATAD2Q6PL18 1390 aa14.13□□□□□ -0.15
RFX3-210ENST00000457373 HAP1P54257 671 aaPredicted RBP14.13□□□□□ -0.15
RFX3-210ENST00000457373 TMF1P82094 1093 aa14.13□□□□□ -0.15
RFX3-210ENST00000457373 EIF4G2P78344 907 aaKnown RBP eCLIP14.12□□□□□ -0.15
RFX3-210ENST00000457373 CABLES1Q8TDN4 633 aa14.12□□□□□ -0.15
RFX3-210ENST00000457373 ALS2Q96Q42 1657 aa14.11□□□□□ -0.15
RFX3-210ENST00000457373 HSPA5P11021 654 aaKnown RBP14.11□□□□□ -0.15
RFX3-210ENST00000457373 NUTM2GQ5VZR2 741 aa14.11□□□□□ -0.15
RFX3-210ENST00000457373 C8orf37Q96NL8 207 aa14.11□□□□□ -0.15
RFX3-210ENST00000457373 ARHGEF10O15013 1369 aa14.1□□□□□ -0.15
RFX3-210ENST00000457373 SLC12A5Q9H2X9 1139 aa14.1□□□□□ -0.15
RFX3-210ENST00000457373 RGS17Q9UGC6 210 aaPredicted RBP14.1□□□□□ -0.15
RFX3-210ENST00000457373 AKAP12Q02952 1782 aa14.09□□□□□ -0.15
RFX3-210ENST00000457373 PLCB2Q00722 1185 aa14.09□□□□□ -0.15
RFX3-210ENST00000457373 ABTB2Q8N961 1025 aa14.09□□□□□ -0.15
RFX3-210ENST00000457373 NGLY1Q96IV0 654 aa14.09□□□□□ -0.15
RFX3-210ENST00000457373 PUS7Q96PZ0 661 aaKnown RBP14.09□□□□□ -0.15
RFX3-210ENST00000457373 ZNF692Q9BU19 519 aaPredicted RBP14.09□□□□□ -0.15
RFX3-210ENST00000457373 MARF1Q9Y4F3 1742 aaKnown RBP14.08□□□□□ -0.16
RFX3-210ENST00000457373 AFF2P51816 1311 aa14.08□□□□□ -0.16
RFX3-210ENST00000457373 USP6P35125 1406 aa14.07□□□□□ -0.16
RFX3-210ENST00000457373 VASPP50552 380 aaPredicted RBP14.07□□□□□ -0.16
RFX3-210ENST00000457373 HDGFL2Q7Z4V5 671 aaPredicted RBP14.07□□□□□ -0.16
RFX3-210ENST00000457373 POLR3GLQ9BT43 218 aa14.07□□□□□ -0.16
RFX3-210ENST00000457373 KTN1Q86UP2 1357 aaKnown RBP14.07□□□□□ -0.16
RFX3-210ENST00000457373 ABCA3Q99758 1704 aa14.07□□□□□ -0.16
RFX3-210ENST00000457373 CDCA8Q53HL2 280 aa14.06□□□□□ -0.16
RFX3-210ENST00000457373 POTEAQ6S8J7 498 aa14.06□□□□□ -0.16
RFX3-210ENST00000457373 ILDR2Q71H61 639 aa14.06□□□□□ -0.16
RFX3-210ENST00000457373 ZNF772Q68DY9 489 aaPredicted RBP14.05□□□□□ -0.16
RFX3-210ENST00000457373 TERF2IPQ9NYB0 399 aa14.05□□□□□ -0.16
RFX3-210ENST00000457373 TTC21BQ7Z4L5 1316 aa14.05□□□□□ -0.16
RFX3-210ENST00000457373 BRD4O60885 1362 aaPredicted RBP14.05□□□□□ -0.16
RFX3-210ENST00000457373 CPSF1Q10570 1443 aaKnown RBP14.05□□□□□ -0.16
RFX3-210ENST00000457373 MON2Q7Z3U7 1717 aa14.04□□□□□ -0.16
RFX3-210ENST00000457373 NLRP6P59044 892 aa14.04□□□□□ -0.16
RFX3-210ENST00000457373 NLRP13Q86W25 1043 aa14.04□□□□□ -0.16
RFX3-210ENST00000457373 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.04□□□□□ -0.168e-7■■■□□ 18.5
RFX3-210ENST00000457373 CD163L1Q9NR16 1453 aa14.04□□□□□ -0.16
RFX3-210ENST00000457373 USP21Q9UK80 565 aa14.03□□□□□ -0.16
RFX3-210ENST00000457373 SSH2Q76I76 1423 aa14.03□□□□□ -0.16
RFX3-210ENST00000457373 CRYBG1Q9Y4K1 1723 aa14.03□□□□□ -0.16
RFX3-210ENST00000457373 PHRF1Q9P1Y6 1649 aaKnown RBP14.02□□□□□ -0.16
RFX3-210ENST00000457373 A0A1W2PP64 1363 aa14.02□□□□□ -0.17
RFX3-210ENST00000457373 ZC3H6P61129 1189 aaKnown RBP14.02□□□□□ -0.17
RFX3-210ENST00000457373 NRKQ7Z2Y5 1582 aa14.01□□□□□ -0.17
RFX3-210ENST00000457373 NINLQ9Y2I6 1382 aa14.01□□□□□ -0.17
RFX3-210ENST00000457373 TTC21AQ8NDW8 1320 aa14.01□□□□□ -0.17
RFX3-210ENST00000457373 FAM83GA6ND36 823 aa14.01□□□□□ -0.17
RFX3-210ENST00000457373 QTRT2Q9H974 415 aaKnown RBP14.01□□□□□ -0.17
RFX3-210ENST00000457373 PIK3C2AO00443 1686 aa14.01□□□□□ -0.17
RFX3-210ENST00000457373 ZBTB7CA1YPR0 619 aa14□□□□□ -0.17
RFX3-210ENST00000457373 FNBP4Q8N3X1 1017 aaPredicted RBP14□□□□□ -0.17
RFX3-210ENST00000457373 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
RFX3-210ENST00000457373 C11orf95C9JLR9 678 aaPredicted RBP13.99□□□□□ -0.17
RFX3-210ENST00000457373 GCP02774 474 aa13.99□□□□□ -0.17
RFX3-210ENST00000457373 NME9Q86XW9 330 aa13.99□□□□□ -0.17
RFX3-210ENST00000457373 ANKRD36BQ8N2N9 1353 aa13.98□□□□□ -0.17
RFX3-210ENST00000457373 MYOM1P52179 1685 aa13.98□□□□□ -0.17
RFX3-210ENST00000457373 PLCH1Q4KWH8 1693 aa13.98□□□□□ -0.17
RFX3-210ENST00000457373 USP19O94966 1318 aa13.98□□□□□ -0.17
RFX3-210ENST00000457373 SOX12O15370 315 aa13.98□□□□□ -0.17
RFX3-210ENST00000457373 RXRBP28702 533 aa13.98□□□□□ -0.17
RFX3-210ENST00000457373 CHRNA2Q15822 529 aa13.98□□□□□ -0.17
RFX3-210ENST00000457373 PRDM11Q9NQV5 511 aa13.98□□□□□ -0.17
RFX3-210ENST00000457373 TRPC5Q9UL62 973 aaPredicted RBP13.98□□□□□ -0.17
RFX3-210ENST00000457373 EDC4Q6P2E9 1401 aaKnown RBP13.98□□□□□ -0.17
RFX3-210ENST00000457373 KIAA0232Q92628 1395 aa13.97□□□□□ -0.17
RFX3-210ENST00000457373 COL14A1Q05707 1796 aaKnown RBP13.97□□□□□ -0.17
RFX3-210ENST00000457373 SLIT2O94813 1529 aa13.97□□□□□ -0.17
RFX3-210ENST00000457373 IFNLR1Q8IU57 520 aaPredicted RBP13.97□□□□□ -0.17
RFX3-210ENST00000457373 UNC5CLQ8IV45 518 aa13.97□□□□□ -0.17
RFX3-210ENST00000457373 BCL9LQ86UU0 1499 aa13.97□□□□□ -0.17
RFX3-210ENST00000457373 BTG4Q9NY30 223 aa13.96□□□□□ -0.17
RFX3-210ENST00000457373 RBM6P78332 1123 aaKnown RBP13.95□□□□□ -0.18
RFX3-210ENST00000457373 CCDC9Q9Y3X0 531 aaKnown RBP13.95□□□□□ -0.18
RFX3-210ENST00000457373 NWD2Q9ULI1 1742 aa13.95□□□□□ -0.18
RFX3-210ENST00000457373 SLIT3O75094 1523 aa13.95□□□□□ -0.18
RFX3-210ENST00000457373 KCNH5Q8NCM2 988 aa13.94□□□□□ -0.18
RFX3-210ENST00000457373 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.94□□□□□ -0.18
RFX3-210ENST00000457373 USP31Q70CQ4 1352 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms