RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 ACEP12821 1306 aa12.66□□□□□ -0.38
PKP4-207ENST00000457109 ZC3H6P61129 1189 aaKnown RBP12.66□□□□□ -0.38
PKP4-207ENST00000457109 DEFB132Q7Z7B7 95 aa12.66□□□□□ -0.38
PKP4-207ENST00000457109 NLRP13Q86W25 1043 aa12.66□□□□□ -0.38
PKP4-207ENST00000457109 USP32Q8NFA0 1604 aa12.66□□□□□ -0.38
PKP4-207ENST00000457109 CENPJQ9HC77 1338 aaPredicted RBP12.65□□□□□ -0.38
PKP4-207ENST00000457109 PLEKHG3A1L390 1219 aa12.65□□□□□ -0.38
PKP4-207ENST00000457109 NBPF1Q3BBV0 1214 aa12.65□□□□□ -0.38
PKP4-207ENST00000457109 SPATA31A5Q5VU36 1347 aa12.64□□□□□ -0.39
PKP4-207ENST00000457109 SPATA31A7Q8IWB4 1347 aa12.64□□□□□ -0.39
PKP4-207ENST00000457109 NEUROD1Q13562 356 aa12.64□□□□□ -0.39
PKP4-207ENST00000457109 CHRNA2Q15822 529 aa12.64□□□□□ -0.39
PKP4-207ENST00000457109 ADGRB2O60241 1585 aa12.64□□□□□ -0.39
PKP4-207ENST00000457109 PDE3BQ13370 1112 aa12.63□□□□□ -0.39
PKP4-207ENST00000457109 USP35Q9P2H5 1018 aa12.63□□□□□ -0.39
PKP4-207ENST00000457109 KIAA0232Q92628 1395 aa12.62□□□□□ -0.39
PKP4-207ENST00000457109 ZBTB7CA1YPR0 619 aa12.62□□□□□ -0.39
PKP4-207ENST00000457109 CABP2Q9NPB3 220 aa12.62□□□□□ -0.39
PKP4-207ENST00000457109 MARF1Q9Y4F3 1742 aaKnown RBP12.62□□□□□ -0.39
PKP4-207ENST00000457109 GLI3P10071 1580 aa12.61□□□□□ -0.39
PKP4-207ENST00000457109 FAM196AQ6ZSG2 479 aa12.61□□□□□ -0.39
PKP4-207ENST00000457109 L3MBTL2Q969R5 705 aa12.61□□□□□ -0.39
PKP4-207ENST00000457109 EVC2Q86UK5 1308 aa12.61□□□□□ -0.39
PKP4-207ENST00000457109 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.6□□□□□ -0.39
PKP4-207ENST00000457109 NLRP6P59044 892 aa12.6□□□□□ -0.39
PKP4-207ENST00000457109 CABP1Q9NZU7 370 aa12.6□□□□□ -0.39
PKP4-207ENST00000457109 RGPD8O14715 1765 aaPredicted RBP12.6□□□□□ -0.39
PKP4-207ENST00000457109 SPATA31A1Q5TZJ5 1347 aa12.6□□□□□ -0.39
PKP4-207ENST00000457109 POLR3AO14802 1390 aaPredicted RBP12.59□□□□□ -0.39
PKP4-207ENST00000457109 GCP02774 474 aa12.59□□□□□ -0.39
PKP4-207ENST00000457109 FAM182BQ5T319 152 aa12.59□□□□□ -0.39
PKP4-207ENST00000457109 ATP7BP35670 1465 aa12.59□□□□□ -0.39
PKP4-207ENST00000457109 BRD4O60885 1362 aaPredicted RBP12.58□□□□□ -0.4
PKP4-207ENST00000457109 EN1Q05925 392 aaPredicted RBP12.58□□□□□ -0.4
PKP4-207ENST00000457109 TCP11L2Q8N4U5 519 aa12.58□□□□□ -0.4
PKP4-207ENST00000457109 ZNF692Q9BU19 519 aaPredicted RBP12.58□□□□□ -0.4
PKP4-207ENST00000457109 PPIP5K1Q6PFW1 1433 aa12.57□□□□□ -0.4
PKP4-207ENST00000457109 C11orf95C9JLR9 678 aaPredicted RBP12.57□□□□□ -0.4
PKP4-207ENST00000457109 APBA3O96018 575 aa12.57□□□□□ -0.4
PKP4-207ENST00000457109 BARGINQ6ZT62 677 aa12.57□□□□□ -0.4
PKP4-207ENST00000457109 SIN3AQ96ST3 1273 aa12.57□□□□□ -0.4
PKP4-207ENST00000457109 THRAP3Q9Y2W1 955 aaKnown RBP12.57□□□□□ -0.4
PKP4-207ENST00000457109 NWD2Q9ULI1 1742 aa12.57□□□□□ -0.4
PKP4-207ENST00000457109 TRIM37O94972 964 aa12.56□□□□□ -0.4
PKP4-207ENST00000457109 LARP1Q6PKG0 1096 aaKnown RBP12.56□□□□□ -0.4
PKP4-207ENST00000457109 COL14A1Q05707 1796 aaKnown RBP12.56□□□□□ -0.4
PKP4-207ENST00000457109 ROCK2O75116 1388 aaKnown RBP12.56□□□□□ -0.4
PKP4-207ENST00000457109 PSDA5PKW4 1024 aaPredicted RBP12.55□□□□□ -0.4
PKP4-207ENST00000457109 PLCH1Q4KWH8 1693 aa12.54□□□□□ -0.4
PKP4-207ENST00000457109 NBPF14Q5TI25 921 aa12.54□□□□□ -0.4
PKP4-207ENST00000457109 KCNH5Q8NCM2 988 aa12.54□□□□□ -0.4
PKP4-207ENST00000457109 CPDO75976 1380 aa12.54□□□□□ -0.4
PKP4-207ENST00000457109 TOM1L2Q6ZVM7 507 aa12.53□□□□□ -0.4
PKP4-207ENST00000457109 USP19O94966 1318 aa12.53□□□□□ -0.4
PKP4-207ENST00000457109 TRPM3Q9HCF6 1732 aaPredicted RBP12.53□□□□□ -0.4
PKP4-207ENST00000457109 ALS2Q96Q42 1657 aa12.52□□□□□ -0.4
PKP4-207ENST00000457109 CSB-PGBD3P0DP91 1061 aa12.52□□□□□ -0.41
PKP4-207ENST00000457109 R3HDM1Q15032 1099 aaKnown RBP12.52□□□□□ -0.41
PKP4-207ENST00000457109 EZH2Q15910 746 aaKnown RBP12.52□□□□□ -0.41
PKP4-207ENST00000457109 SSH2Q76I76 1423 aa12.52□□□□□ -0.41
PKP4-207ENST00000457109 ITSN1Q15811 1721 aa12.51□□□□□ -0.41
PKP4-207ENST00000457109 EP400Q96L91 3159 aa12.51□□□□□ -0.41
PKP4-207ENST00000457109 SOX12O15370 315 aa12.51□□□□□ -0.41
PKP4-207ENST00000457109 CARD11Q9BXL7 1154 aa12.51□□□□□ -0.41
PKP4-207ENST00000457109 ARHGEF28Q8N1W1 1705 aaKnown RBP12.51□□□□□ -0.41
PKP4-207ENST00000457109 KIAA1210Q9ULL0 1709 aa12.51□□□□□ -0.41
PKP4-207ENST00000457109 DDB1Q16531 1140 aa12.5□□□□□ -0.41
PKP4-207ENST00000457109 TMC1Q8TDI8 760 aa12.5□□□□□ -0.41
PKP4-207ENST00000457109 CDCA7Q9BWT1 371 aaPredicted RBP12.5□□□□□ -0.41
PKP4-207ENST00000457109 USP6P35125 1406 aa12.49□□□□□ -0.41
PKP4-207ENST00000457109 AATKQ6ZMQ8 1374 aa12.49□□□□□ -0.41
PKP4-207ENST00000457109 TTC21BQ7Z4L5 1316 aa12.49□□□□□ -0.41
PKP4-207ENST00000457109 TTC21AQ8NDW8 1320 aa12.49□□□□□ -0.41
PKP4-207ENST00000457109 CAMKK2Q96RR4 588 aa12.49□□□□□ -0.41
PKP4-207ENST00000457109 ABCA3Q99758 1704 aa12.48□□□□□ -0.41
PKP4-207ENST00000457109 HDGFL2Q7Z4V5 671 aaPredicted RBP12.48□□□□□ -0.41
PKP4-207ENST00000457109 PARD3Q8TEW0 1356 aa12.47□□□□□ -0.41
PKP4-207ENST00000457109 TONSLQ96HA7 1378 aa12.47□□□□□ -0.41
PKP4-207ENST00000457109 BRWD3Q6RI45 1802 aa12.47□□□□□ -0.41
PKP4-207ENST00000457109 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
PKP4-207ENST00000457109 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.47□□□□□ -0.418e-7■■■□□ 15.8
PKP4-207ENST00000457109 CRB1P82279 1406 aa12.46□□□□□ -0.41
PKP4-207ENST00000457109 KTN1Q86UP2 1357 aaKnown RBP12.46□□□□□ -0.41
PKP4-207ENST00000457109 NRAPQ86VF7 1730 aa12.46□□□□□ -0.41
PKP4-207ENST00000457109 EXOC5O00471 708 aa12.46□□□□□ -0.41
PKP4-207ENST00000457109 ARHGEF25Q86VW2 580 aa12.46□□□□□ -0.41
PKP4-207ENST00000457109 TERF2IPQ9NYB0 399 aa12.46□□□□□ -0.41
PKP4-207ENST00000457109 SRCAPQ6ZRS2 3230 aa12.45□□□□□ -0.42
PKP4-207ENST00000457109 CAMTA1Q9Y6Y1 1673 aa12.45□□□□□ -0.42
PKP4-207ENST00000457109 WDR17Q8IZU2 1322 aa12.45□□□□□ -0.42
PKP4-207ENST00000457109 DCAF8L1A6NGE4 600 aa12.45□□□□□ -0.42
PKP4-207ENST00000457109 DISP2A7MBM2 1401 aa12.45□□□□□ -0.42
PKP4-207ENST00000457109 CARD10Q9BWT7 1032 aa12.44□□□□□ -0.42
PKP4-207ENST00000457109 PPP1R1BQ9UD71 204 aaPredicted RBP12.44□□□□□ -0.42
PKP4-207ENST00000457109 AXIN2Q9Y2T1 843 aa12.44□□□□□ -0.42
PKP4-207ENST00000457109 COL5A2P05997 1499 aaPredicted RBP12.43□□□□□ -0.42
PKP4-207ENST00000457109 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
PKP4-207ENST00000457109 NLRP2Q9NX02 1062 aa12.42□□□□□ -0.42
PKP4-207ENST00000457109 OVOS2A0A0G2JMS6 1433 aa12.42□□□□□ -0.42
PKP4-207ENST00000457109 OVOS2A0A0J9YW53 1432 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms