RNA–Protein interactions for RNA: ENST00000455580.5

PPP1CB-208, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 3

Gene PPP1CB, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-208ENST00000455580 CABP2Q9NPB3 220 aa34.38■■■■□ 3.09
PPP1CB-208ENST00000455580 ABCA3Q99758 1704 aa34.38■■■■□ 3.09
PPP1CB-208ENST00000455580 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.38■■■■□ 3.09
PPP1CB-208ENST00000455580 TOPAZ1Q8N9V7 1692 aa34.35■■■■□ 3.09
PPP1CB-208ENST00000455580 VPS72Q15906 364 aa34.33■■■■□ 3.09
PPP1CB-208ENST00000455580 QRICH2Q9H0J4 1663 aa34.32■■■■□ 3.08
PPP1CB-208ENST00000455580 RALGAPBQ86X10 1494 aa34.32■■■■□ 3.08
PPP1CB-208ENST00000455580 PPIP5K1Q6PFW1 1433 aa34.3■■■■□ 3.08
PPP1CB-208ENST00000455580 EVC2Q86UK5 1308 aa34.29■■■■□ 3.08
PPP1CB-208ENST00000455580 TONSLQ96HA7 1378 aa34.28■■■■□ 3.08
PPP1CB-208ENST00000455580 GLI3P10071 1580 aa34.28■■■■□ 3.08
PPP1CB-208ENST00000455580 NWD2Q9ULI1 1742 aa34.27■■■■□ 3.08
PPP1CB-208ENST00000455580 ATAD2Q6PL18 1390 aa34.27■■■■□ 3.08
PPP1CB-208ENST00000455580 PLCH1Q4KWH8 1693 aa34.27■■■■□ 3.08
PPP1CB-208ENST00000455580 BTG4Q9NY30 223 aa34.26■■■■□ 3.08
PPP1CB-208ENST00000455580 CABP1Q9NZU7 370 aa34.26■■■■□ 3.08
PPP1CB-208ENST00000455580 NUTM2GQ5VZR2 741 aa34.25■■■■□ 3.07
PPP1CB-208ENST00000455580 CRYBG1Q9Y4K1 1723 aa34.24■■■■□ 3.07
PPP1CB-208ENST00000455580 ABTB2Q8N961 1025 aa34.23■■■■□ 3.07
PPP1CB-208ENST00000455580 CCDC9Q9Y3X0 531 aaKnown RBP34.23■■■■□ 3.07
PPP1CB-208ENST00000455580 ONECUT3O60422 494 aaPredicted RBP34.22■■■■□ 3.07
PPP1CB-208ENST00000455580 CARD11Q9BXL7 1154 aa34.21■■■■□ 3.07
PPP1CB-208ENST00000455580 PRDM11Q9NQV5 511 aa34.21■■■■□ 3.07
PPP1CB-208ENST00000455580 COL14A1Q05707 1796 aaKnown RBP34.21■■■■□ 3.07
PPP1CB-208ENST00000455580 BRD4O60885 1362 aaPredicted RBP34.2■■■■□ 3.07
PPP1CB-208ENST00000455580 SEPT12Q8IYM1 358 aa34.18■■■■□ 3.06
PPP1CB-208ENST00000455580 KIAA0232Q92628 1395 aa34.17■■■■□ 3.06
PPP1CB-208ENST00000455580 ZC3H6P61129 1189 aaKnown RBP34.15■■■■□ 3.06
PPP1CB-208ENST00000455580 NLRP13Q86W25 1043 aa34.15■■■■□ 3.06
PPP1CB-208ENST00000455580 NRAPQ86VF7 1730 aa34.15■■■■□ 3.06
PPP1CB-208ENST00000455580 USP6P35125 1406 aa34.13■■■■□ 3.05
PPP1CB-208ENST00000455580 USP19O94966 1318 aa34.13■■■■□ 3.05
PPP1CB-208ENST00000455580 CHRNA2Q15822 529 aa34.13■■■■□ 3.05
PPP1CB-208ENST00000455580 PHRF1Q9P1Y6 1649 aaKnown RBP34.12■■■■□ 3.05
PPP1CB-208ENST00000455580 SBNO2Q9Y2G9 1366 aa34.11■■■■□ 3.05
PPP1CB-208ENST00000455580 ZNF692Q9BU19 519 aaPredicted RBP34.11■■■■□ 3.05
PPP1CB-208ENST00000455580 CCDC125Q86Z20 511 aa34.1■■■■□ 3.05
PPP1CB-208ENST00000455580 SPATA31A5Q5VU36 1347 aa34.09■■■■□ 3.05
PPP1CB-208ENST00000455580 SPATA31A7Q8IWB4 1347 aa34.09■■■■□ 3.05
PPP1CB-208ENST00000455580 SSH2Q76I76 1423 aa34.09■■■■□ 3.05
PPP1CB-208ENST00000455580 GCP02774 474 aa34.08■■■■□ 3.05
PPP1CB-208ENST00000455580 FAM98CQ17RN3 349 aaKnown RBP34.07■■■■□ 3.04
PPP1CB-208ENST00000455580 CPDO75976 1380 aa34.06■■■■□ 3.04
PPP1CB-208ENST00000455580 NLRP6P59044 892 aa34.05■■■■□ 3.04
PPP1CB-208ENST00000455580 KRT27Q7Z3Y8 459 aa34.05■■■■□ 3.04
PPP1CB-208ENST00000455580 BRWD3Q6RI45 1802 aa34.04■■■■□ 3.04
PPP1CB-208ENST00000455580 EP400Q96L91 3159 aa34.04■■■■□ 3.04
PPP1CB-208ENST00000455580 NRKQ7Z2Y5 1582 aa34.03■■■■□ 3.04
PPP1CB-208ENST00000455580 STRN4Q9NRL3 753 aa34.02■■■■□ 3.04
PPP1CB-208ENST00000455580 A0A0G2JS52 829 aa34.01■■■■□ 3.03
PPP1CB-208ENST00000455580 MYT1Q01538 1121 aa34.01■■■■□ 3.03
PPP1CB-208ENST00000455580 TTC21BQ7Z4L5 1316 aa34.01■■■■□ 3.03
PPP1CB-208ENST00000455580 CPSF1Q10570 1443 aaKnown RBP34■■■■□ 3.03
PPP1CB-208ENST00000455580 SPATA31A1Q5TZJ5 1347 aa34■■■■□ 3.03
PPP1CB-208ENST00000455580 EVA1CP58658 441 aa33.99■■■■□ 3.03
PPP1CB-208ENST00000455580 TTC21AQ8NDW8 1320 aa33.96■■■■□ 3.03
PPP1CB-208ENST00000455580 CAMTA1Q9Y6Y1 1673 aa33.96■■■■□ 3.03
PPP1CB-208ENST00000455580 PUS7Q96PZ0 661 aaKnown RBP33.95■■■■□ 3.03
PPP1CB-208ENST00000455580 BLMP54132 1417 aaPredicted RBP33.95■■■■□ 3.02
PPP1CB-208ENST00000455580 KTN1Q86UP2 1357 aaKnown RBP33.94■■■■□ 3.02
PPP1CB-208ENST00000455580 SLIT3O75094 1523 aa33.94■■■■□ 3.02
PPP1CB-208ENST00000455580 AKAP12Q02952 1782 aa33.93■■■■□ 3.02
PPP1CB-208ENST00000455580 ST20-MTHFSA0A0A6YYL1 179 aa33.92■■■■□ 3.02
PPP1CB-208ENST00000455580 TESK2Q96S53 571 aa33.92■■■■□ 3.02
PPP1CB-208ENST00000455580 PIK3C2AO00443 1686 aa33.92■■■■□ 3.02
PPP1CB-208ENST00000455580 LMO7Q8WWI1 1683 aa33.91■■■■□ 3.02
PPP1CB-208ENST00000455580 LARP1Q6PKG0 1096 aaKnown RBP33.91■■■■□ 3.02
PPP1CB-208ENST00000455580 TMC1Q8TDI8 760 aa33.9■■■■□ 3.02
PPP1CB-208ENST00000455580 SLC12A5Q9H2X9 1139 aa33.9■■■■□ 3.02
PPP1CB-208ENST00000455580 PCGF6Q9BYE7 350 aa33.89■■■■□ 3.02
PPP1CB-208ENST00000455580 USP35Q9P2H5 1018 aa33.89■■■■□ 3.02
PPP1CB-208ENST00000455580 AATKQ6ZMQ8 1374 aa33.88■■■■□ 3.01
PPP1CB-208ENST00000455580 BARGINQ6ZT62 677 aa33.88■■■■□ 3.01
PPP1CB-208ENST00000455580 THSD7AQ9UPZ6 1657 aa33.87■■■■□ 3.01
PPP1CB-208ENST00000455580 ZBTB7CA1YPR0 619 aa33.87■■■■□ 3.01
PPP1CB-208ENST00000455580 SLC24A1O60721 1099 aa33.87■■■■□ 3.01
PPP1CB-208ENST00000455580 KCNH5Q8NCM2 988 aa33.87■■■■□ 3.01
PPP1CB-208ENST00000455580 TIMELESSQ9UNS1 1208 aa33.87■■■■□ 3.01
PPP1CB-208ENST00000455580 CD163L1Q9NR16 1453 aa33.87■■■■□ 3.01
PPP1CB-208ENST00000455580 CLSPNQ9HAW4 1339 aa33.86■■■■□ 3.01
PPP1CB-208ENST00000455580 SF3B2Q13435 895 aaKnown RBP33.86■■■■□ 3.01
PPP1CB-208ENST00000455580 HDGFL2Q7Z4V5 671 aaPredicted RBP33.85■■■■□ 3.01
PPP1CB-208ENST00000455580 ARHGEF25Q86VW2 580 aa33.84■■■■□ 3.01
PPP1CB-208ENST00000455580 TCP11L2Q8N4U5 519 aa33.84■■■■□ 3.01
PPP1CB-208ENST00000455580 COL5A2P05997 1499 aaPredicted RBP33.83■■■■□ 3.01
PPP1CB-208ENST00000455580 FAM182BQ5T319 152 aa33.83■■■■□ 3.01
PPP1CB-208ENST00000455580 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.83■■■■□ 3.01
PPP1CB-208ENST00000455580 DEFB132Q7Z7B7 95 aa33.82■■■■□ 3
PPP1CB-208ENST00000455580 THRAP3Q9Y2W1 955 aaKnown RBP33.82■■■■□ 3
PPP1CB-208ENST00000455580 TERF2IPQ9NYB0 399 aa33.81■■■■□ 3
PPP1CB-208ENST00000455580 AXIN2Q9Y2T1 843 aa33.81■■■■□ 3
PPP1CB-208ENST00000455580 MON2Q7Z3U7 1717 aa33.81■■■■□ 3
PPP1CB-208ENST00000455580 ZRANB1Q9UGI0 708 aa33.8■■■■□ 3
PPP1CB-208ENST00000455580 USP31Q70CQ4 1352 aa33.8■■■■□ 3
PPP1CB-208ENST00000455580 SOX12O15370 315 aa33.78■■■■□ 3
PPP1CB-208ENST00000455580 NME9Q86XW9 330 aa33.77■■■■□ 3
PPP1CB-208ENST00000455580 COL18A1P39060 1754 aa33.77■■■■□ 3
PPP1CB-208ENST00000455580 CRB1P82279 1406 aa33.77■■■■□ 3
PPP1CB-208ENST00000455580 A0A1W2PP64 1363 aa33.75■■■□□ 2.99
PPP1CB-208ENST00000455580 USP47Q96K76 1375 aa33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms