RNA–Protein interactions for RNA: ENST00000455571.5

RUNX1-208, Transcript of runt related transcription factor 1, humanhuman

TSL 3

Gene RUNX1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-208ENST00000455571 USP47Q96K76 1375 aa25.82■■□□□ 1.72
RUNX1-208ENST00000455571 PHRF1Q9P1Y6 1649 aaKnown RBP25.81■■□□□ 1.72
RUNX1-208ENST00000455571 CABLES1Q8TDN4 633 aa25.8■■□□□ 1.72
RUNX1-208ENST00000455571 CABP1Q9NZU7 370 aa25.8■■□□□ 1.72
RUNX1-208ENST00000455571 PLCH1Q4KWH8 1693 aa25.8■■□□□ 1.72
RUNX1-208ENST00000455571 ST20-MTHFSA0A0A6YYL1 179 aa25.78■■□□□ 1.72
RUNX1-208ENST00000455571 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.77■■□□□ 1.72
RUNX1-208ENST00000455571 USP6P35125 1406 aa25.77■■□□□ 1.72
RUNX1-208ENST00000455571 MON2Q7Z3U7 1717 aa25.76■■□□□ 1.71
RUNX1-208ENST00000455571 NWD2Q9ULI1 1742 aa25.74■■□□□ 1.71
RUNX1-208ENST00000455571 NRKQ7Z2Y5 1582 aa25.74■■□□□ 1.71
RUNX1-208ENST00000455571 BRD4O60885 1362 aaPredicted RBP25.74■■□□□ 1.71
RUNX1-208ENST00000455571 USP21Q9UK80 565 aa25.74■■□□□ 1.71
RUNX1-208ENST00000455571 SOCS7O14512 581 aa25.73■■□□□ 1.71
RUNX1-208ENST00000455571 TESK2Q96S53 571 aa25.73■■□□□ 1.71
RUNX1-208ENST00000455571 FNBP4Q8N3X1 1017 aaPredicted RBP25.72■■□□□ 1.71
RUNX1-208ENST00000455571 COL14A1Q05707 1796 aaKnown RBP25.72■■□□□ 1.71
RUNX1-208ENST00000455571 PIK3C2AO00443 1686 aa25.71■■□□□ 1.71
RUNX1-208ENST00000455571 NUTM2GQ5VZR2 741 aa25.71■■□□□ 1.71
RUNX1-208ENST00000455571 SLIT2O94813 1529 aa25.7■■□□□ 1.7
RUNX1-208ENST00000455571 ABTB2Q8N961 1025 aa25.7■■□□□ 1.7
RUNX1-208ENST00000455571 BCL9LQ86UU0 1499 aa25.69■■□□□ 1.7
RUNX1-208ENST00000455571 SLC24A1O60721 1099 aa25.69■■□□□ 1.7
RUNX1-208ENST00000455571 RXRBP28702 533 aa25.69■■□□□ 1.7
RUNX1-208ENST00000455571 QTRT2Q9H974 415 aaKnown RBP25.69■■□□□ 1.7
RUNX1-208ENST00000455571 TMC1Q8TDI8 760 aa25.68■■□□□ 1.7
RUNX1-208ENST00000455571 ATRNO75882 1429 aa25.68■■□□□ 1.7
RUNX1-208ENST00000455571 CPSF1Q10570 1443 aaKnown RBP25.68■■□□□ 1.7
RUNX1-208ENST00000455571 NRAPQ86VF7 1730 aa25.67■■□□□ 1.7
RUNX1-208ENST00000455571 TRPC5Q9UL62 973 aaPredicted RBP25.67■■□□□ 1.7
RUNX1-208ENST00000455571 KTN1Q86UP2 1357 aaKnown RBP25.67■■□□□ 1.7
RUNX1-208ENST00000455571 SSH2Q76I76 1423 aa25.66■■□□□ 1.7
RUNX1-208ENST00000455571 ZNF692Q9BU19 519 aaPredicted RBP25.66■■□□□ 1.7
RUNX1-208ENST00000455571 CDK12Q9NYV4 1490 aaPredicted RBP25.66■■□□□ 1.7
RUNX1-208ENST00000455571 TMF1P82094 1093 aa25.65■■□□□ 1.7
RUNX1-208ENST00000455571 PUS7Q96PZ0 661 aaKnown RBP25.65■■□□□ 1.7
RUNX1-208ENST00000455571 CD163L1Q9NR16 1453 aa25.65■■□□□ 1.7
RUNX1-208ENST00000455571 RBM6P78332 1123 aaKnown RBP25.64■■□□□ 1.7
RUNX1-208ENST00000455571 USP19O94966 1318 aa25.63■■□□□ 1.69
RUNX1-208ENST00000455571 NLRP13Q86W25 1043 aa25.63■■□□□ 1.69
RUNX1-208ENST00000455571 NINLQ9Y2I6 1382 aa25.63■■□□□ 1.69
RUNX1-208ENST00000455571 UNC5CLQ8IV45 518 aa25.62■■□□□ 1.69
RUNX1-208ENST00000455571 KIAA0232Q92628 1395 aa25.61■■□□□ 1.69
RUNX1-208ENST00000455571 FAM83GA6ND36 823 aa25.61■■□□□ 1.69
RUNX1-208ENST00000455571 HDGFL2Q7Z4V5 671 aaPredicted RBP25.61■■□□□ 1.69
RUNX1-208ENST00000455571 SLC12A5Q9H2X9 1139 aa25.61■■□□□ 1.69
RUNX1-208ENST00000455571 PRDM11Q9NQV5 511 aa25.61■■□□□ 1.69
RUNX1-208ENST00000455571 RGS12O14924 1447 aa25.61■■□□□ 1.69
RUNX1-208ENST00000455571 TTC21BQ7Z4L5 1316 aa25.61■■□□□ 1.69
RUNX1-208ENST00000455571 TTC21AQ8NDW8 1320 aa25.61■■□□□ 1.69
RUNX1-208ENST00000455571 SLIT3O75094 1523 aa25.6■■□□□ 1.69
RUNX1-208ENST00000455571 NLRP6P59044 892 aa25.6■■□□□ 1.69
RUNX1-208ENST00000455571 A0A1W2PP64 1363 aa25.59■■□□□ 1.69
RUNX1-208ENST00000455571 TERF2IPQ9NYB0 399 aa25.59■■□□□ 1.69
RUNX1-208ENST00000455571 MYOM1P52179 1685 aa25.58■■□□□ 1.69
RUNX1-208ENST00000455571 GLI3P10071 1580 aa25.58■■□□□ 1.69
RUNX1-208ENST00000455571 USP54Q70EL1 1684 aa25.58■■□□□ 1.68
RUNX1-208ENST00000455571 ZC3H6P61129 1189 aaKnown RBP25.57■■□□□ 1.68
RUNX1-208ENST00000455571 CDCA8Q53HL2 280 aa25.57■■□□□ 1.68
RUNX1-208ENST00000455571 EDC4Q6P2E9 1401 aaKnown RBP25.56■■□□□ 1.68
RUNX1-208ENST00000455571 BTG4Q9NY30 223 aa25.56■■□□□ 1.68
RUNX1-208ENST00000455571 EIF4G2P78344 907 aaKnown RBP eCLIP25.55■■□□□ 1.683e-7■■■■■ 33.4
RUNX1-208ENST00000455571 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.55■■□□□ 1.68
RUNX1-208ENST00000455571 LMO7Q8WWI1 1683 aa25.55■■□□□ 1.68
RUNX1-208ENST00000455571 CHRNA2Q15822 529 aa25.54■■□□□ 1.68
RUNX1-208ENST00000455571 GJD4Q96KN9 370 aaPredicted RBP25.54■■□□□ 1.68
RUNX1-208ENST00000455571 CCDC9Q9Y3X0 531 aaKnown RBP25.54■■□□□ 1.68
RUNX1-208ENST00000455571 CPDO75976 1380 aa25.54■■□□□ 1.68
RUNX1-208ENST00000455571 GCP02774 474 aa25.53■■□□□ 1.68
RUNX1-208ENST00000455571 VPS72Q15906 364 aa25.52■■□□□ 1.68
RUNX1-208ENST00000455571 HSPA5P11021 654 aaKnown RBP25.51■■□□□ 1.67
RUNX1-208ENST00000455571 ANKRD36BQ8N2N9 1353 aa25.51■■□□□ 1.67
RUNX1-208ENST00000455571 ZBTB7CA1YPR0 619 aa25.49■■□□□ 1.67
RUNX1-208ENST00000455571 NFAT5O94916 1531 aa25.48■■□□□ 1.67
RUNX1-208ENST00000455571 NME9Q86XW9 330 aa25.48■■□□□ 1.67
RUNX1-208ENST00000455571 KIF20BQ96Q89 1820 aa25.48■■□□□ 1.67
RUNX1-208ENST00000455571 USP31Q70CQ4 1352 aa25.47■■□□□ 1.67
RUNX1-208ENST00000455571 BRWD3Q6RI45 1802 aa25.47■■□□□ 1.67
RUNX1-208ENST00000455571 LTN1O94822 1766 aa25.47■■□□□ 1.67
RUNX1-208ENST00000455571 SOX12O15370 315 aa25.47■■□□□ 1.67
RUNX1-208ENST00000455571 CAMTA1Q9Y6Y1 1673 aa25.47■■□□□ 1.67
RUNX1-208ENST00000455571 KCNH5Q8NCM2 988 aa25.46■■□□□ 1.67
RUNX1-208ENST00000455571 STRN4Q9NRL3 753 aa25.46■■□□□ 1.67
RUNX1-208ENST00000455571 COL18A1P39060 1754 aa25.46■■□□□ 1.67
RUNX1-208ENST00000455571 ZRANB1Q9UGI0 708 aa25.45■■□□□ 1.66
RUNX1-208ENST00000455571 RGPD5Q99666 1765 aa25.45■■□□□ 1.66
RUNX1-208ENST00000455571 POLR3GLQ9BT43 218 aa25.44■■□□□ 1.66
RUNX1-208ENST00000455571 OVOS2A0A0J9YW53 1432 aa25.43■■□□□ 1.66
RUNX1-208ENST00000455571 OVOS2Q6IE36 1432 aa25.43■■□□□ 1.66
RUNX1-208ENST00000455571 AATKQ6ZMQ8 1374 aa25.42■■□□□ 1.66
RUNX1-208ENST00000455571 COL5A2P05997 1499 aaPredicted RBP25.41■■□□□ 1.66
RUNX1-208ENST00000455571 EVA1CP58658 441 aa25.41■■□□□ 1.66
RUNX1-208ENST00000455571 SPATA31A5Q5VU36 1347 aa25.4■■□□□ 1.66
RUNX1-208ENST00000455571 SPATA31A7Q8IWB4 1347 aa25.4■■□□□ 1.66
RUNX1-208ENST00000455571 ABCC6O95255 1503 aa25.4■■□□□ 1.66
RUNX1-208ENST00000455571 A0A0G2JS52 829 aa25.39■■□□□ 1.66
RUNX1-208ENST00000455571 MYT1Q01538 1121 aa25.39■■□□□ 1.66
RUNX1-208ENST00000455571 THSD7AQ9UPZ6 1657 aa25.38■■□□□ 1.65
RUNX1-208ENST00000455571 FAM98CQ17RN3 349 aaKnown RBP25.37■■□□□ 1.65
RUNX1-208ENST00000455571 ARHGEF25Q86VW2 580 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms