RNA–Protein interactions for RNA: ENST00000455322.6

CLASP1-208, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 5 BASIC

Gene CLASP1, Length 5,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-208ENST00000455322 CCDC39Q9UFE4 941 aa10.15□□□□□ -0.78
CLASP1-208ENST00000455322 GPRASP1Q5JY77 1395 aa10.15□□□□□ -0.78
CLASP1-208ENST00000455322 TOPBP1Q92547 1522 aa10.15□□□□□ -0.78
CLASP1-208ENST00000455322 GNAI2P04899 355 aa10.15□□□□□ -0.78
CLASP1-208ENST00000455322 TXNDC2Q86VQ3 553 aa10.15□□□□□ -0.78
CLASP1-208ENST00000455322 CTDP1Q9Y5B0 961 aaPredicted RBP10.15□□□□□ -0.78
CLASP1-208ENST00000455322 NEK4P51957 841 aa10.15□□□□□ -0.79
CLASP1-208ENST00000455322 CAVIN1Q6NZI2 390 aaKnown RBP10.15□□□□□ -0.79
CLASP1-208ENST00000455322 KDM4AO75164 1064 aa10.14□□□□□ -0.79
CLASP1-208ENST00000455322 RNF214Q8ND24 703 aa10.14□□□□□ -0.79
CLASP1-208ENST00000455322 IFT140Q96RY7 1462 aa10.14□□□□□ -0.79
CLASP1-208ENST00000455322 RABEP1Q15276 862 aa10.14□□□□□ -0.79
CLASP1-208ENST00000455322 CCDC184Q52MB2 194 aa10.14□□□□□ -0.79
CLASP1-208ENST00000455322 PLEKHO1Q53GL0 409 aaPredicted RBP10.14□□□□□ -0.79
CLASP1-208ENST00000455322 ESCO1Q5FWF5 840 aa10.14□□□□□ -0.79
CLASP1-208ENST00000455322 CABP1Q9NZU7 370 aa10.14□□□□□ -0.79
CLASP1-208ENST00000455322 SLC4A2P04920 1241 aa10.14□□□□□ -0.79
CLASP1-208ENST00000455322 WDR63Q8IWG1 891 aa10.14□□□□□ -0.79
CLASP1-208ENST00000455322 VSIG10Q8N0Z9 540 aa10.13□□□□□ -0.79
CLASP1-208ENST00000455322 RBM33Q96EV2 1170 aaKnown RBP10.13□□□□□ -0.79
CLASP1-208ENST00000455322 SNAPC4Q5SXM2 1469 aa10.13□□□□□ -0.79
CLASP1-208ENST00000455322 NAT10Q9H0A0 1025 aaKnown RBP10.13□□□□□ -0.79
CLASP1-208ENST00000455322 PRPF40AO75400 957 aaKnown RBP10.13□□□□□ -0.79
CLASP1-208ENST00000455322 MEX3CQ5U5Q3 659 aaKnown RBP10.13□□□□□ -0.79
CLASP1-208ENST00000455322 SULT6B1Q6IMI4 303 aa10.13□□□□□ -0.79
CLASP1-208ENST00000455322 OLFM4Q6UX06 510 aa10.13□□□□□ -0.79
CLASP1-208ENST00000455322 POLA1P09884 1462 aaPredicted RBP10.13□□□□□ -0.79
CLASP1-208ENST00000455322 LETM1O95202 739 aaPredicted RBP10.13□□□□□ -0.79
CLASP1-208ENST00000455322 HIP1O00291 1037 aa10.12□□□□□ -0.79
CLASP1-208ENST00000455322 BACH2Q9BYV9 841 aa10.12□□□□□ -0.79
CLASP1-208ENST00000455322 SETQ01105 290 aaPredicted RBP10.12□□□□□ -0.79
CLASP1-208ENST00000455322 ERC1Q8IUD2 1116 aa10.12□□□□□ -0.79
CLASP1-208ENST00000455322 BRMS1Q9HCU9 246 aa10.12□□□□□ -0.79
CLASP1-208ENST00000455322 CDK13Q14004 1512 aaKnown RBP10.12□□□□□ -0.79
CLASP1-208ENST00000455322 MCM2P49736 904 aa10.12□□□□□ -0.79
CLASP1-208ENST00000455322 MVPQ14764 893 aaKnown RBP10.12□□□□□ -0.79
CLASP1-208ENST00000455322 TSPY26PQ9H489 355 aa10.12□□□□□ -0.79
CLASP1-208ENST00000455322 R3HCC1Q9Y3T6 440 aaKnown RBP10.11□□□□□ -0.79
CLASP1-208ENST00000455322 CT47B1P0C2W7 299 aaPredicted RBP10.11□□□□□ -0.79
CLASP1-208ENST00000455322 CCT4P50991 539 aaKnown RBP10.11□□□□□ -0.79
CLASP1-208ENST00000455322 MBD3O95983 291 aa10.11□□□□□ -0.79
CLASP1-208ENST00000455322 WWC1Q8IX03 1113 aa10.11□□□□□ -0.79
CLASP1-208ENST00000455322 SDF4Q9BRK5 362 aa10.11□□□□□ -0.79
CLASP1-208ENST00000455322 BCL11BQ9C0K0 894 aaPredicted RBP10.11□□□□□ -0.79
CLASP1-208ENST00000455322 ATF7IPQ6VMQ6 1270 aa10.11□□□□□ -0.79
CLASP1-208ENST00000455322 KIF6Q6ZMV9 814 aa10.11□□□□□ -0.79
CLASP1-208ENST00000455322 PCF11O94913 1555 aaKnown RBP10.11□□□□□ -0.79
CLASP1-208ENST00000455322 TEX35Q5T0J7 233 aa10.11□□□□□ -0.79
CLASP1-208ENST00000455322 PDILTQ8N807 584 aa10.11□□□□□ -0.79
CLASP1-208ENST00000455322 MNS1Q8NEH6 495 aa10.11□□□□□ -0.79
CLASP1-208ENST00000455322 LRRCC1Q9C099 1032 aa10.11□□□□□ -0.79
CLASP1-208ENST00000455322 TBC1D2BQ9UPU7 963 aa10.11□□□□□ -0.79
CLASP1-208ENST00000455322 XBP1P17861 261 aa10.1□□□□□ -0.79
CLASP1-208ENST00000455322 HDGFL1Q5TGJ6 251 aa10.1□□□□□ -0.79
CLASP1-208ENST00000455322 RTEL1-TNFRSF6BF6WH68 1400 aa10.1□□□□□ -0.79
CLASP1-208ENST00000455322 MAP4K4O95819 1239 aaPredicted RBP10.1□□□□□ -0.79
CLASP1-208ENST00000455322 ZNF692Q9BU19 519 aaPredicted RBP10.1□□□□□ -0.79
CLASP1-208ENST00000455322 FAM177BA6PVY3 158 aa10.1□□□□□ -0.79
CLASP1-208ENST00000455322 MTMR7Q9Y216 660 aa10.1□□□□□ -0.79
CLASP1-208ENST00000455322 NAP1L1P55209 391 aaKnown RBP10.09□□□□□ -0.79
CLASP1-208ENST00000455322 TTC39AQ5SRH9 613 aa10.09□□□□□ -0.79
CLASP1-208ENST00000455322 CHD1LQ86WJ1 897 aa10.09□□□□□ -0.79
CLASP1-208ENST00000455322 DNMBPQ6XZF7 1577 aa10.09□□□□□ -0.79
CLASP1-208ENST00000455322 HMGXB3Q12766 1538 aa10.09□□□□□ -0.79
CLASP1-208ENST00000455322 CC2D2AQ9P2K1 1620 aa10.09□□□□□ -0.79
CLASP1-208ENST00000455322 EPRSP07814 1512 aaKnown RBP10.09□□□□□ -0.79
CLASP1-208ENST00000455322 K7ELQ4 463 aaPredicted RBP10.09□□□□□ -0.79
CLASP1-208ENST00000455322 SART3Q15020 963 aaKnown RBP10.09□□□□□ -0.79
CLASP1-208ENST00000455322 RBM42Q9BTD8 480 aaKnown RBP10.09□□□□□ -0.79
CLASP1-208ENST00000455322 TRIM5Q9C035 493 aa10.09□□□□□ -0.79
CLASP1-208ENST00000455322 FIBPO43427 364 aa10.09□□□□□ -0.79
CLASP1-208ENST00000455322 ARGLU1Q9NWB6 273 aaPredicted RBP10.09□□□□□ -0.79
CLASP1-208ENST00000455322 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLASP1-208ENST00000455322 NAIPQ13075 1403 aa10.09□□□□□ -0.79
CLASP1-208ENST00000455322 SAMD1Q6SPF0 538 aaPredicted RBP10.08□□□□□ -0.8
CLASP1-208ENST00000455322 CCDC43Q96MW1 224 aaKnown RBP10.08□□□□□ -0.8
CLASP1-208ENST00000455322 NSD3Q9BZ95 1437 aa10.08□□□□□ -0.8
CLASP1-208ENST00000455322 TATP17735 454 aaPredicted RBP10.08□□□□□ -0.8
CLASP1-208ENST00000455322 ZNF428Q96B54 188 aa10.08□□□□□ -0.8
CLASP1-208ENST00000455322 SIL1Q9H173 461 aa10.08□□□□□ -0.8
CLASP1-208ENST00000455322 BRPF3Q9ULD4 1205 aa10.08□□□□□ -0.8
CLASP1-208ENST00000455322 KINO60870 393 aaKnown RBP10.08□□□□□ -0.8
CLASP1-208ENST00000455322 PDCP20941 246 aa10.08□□□□□ -0.8
CLASP1-208ENST00000455322 CWC22Q9HCG8 908 aaKnown RBP10.08□□□□□ -0.8
CLASP1-208ENST00000455322 CEBPZQ03701 1054 aaKnown RBP10.08□□□□□ -0.8
CLASP1-208ENST00000455322 RRS1Q15050 365 aaKnown RBP10.08□□□□□ -0.8
CLASP1-208ENST00000455322 SRCIN1Q9C0H9 1055 aa10.08□□□□□ -0.8
CLASP1-208ENST00000455322 CYP46A1Q9Y6A2 500 aa10.08□□□□□ -0.8
CLASP1-208ENST00000455322 PTPN23Q9H3S7 1636 aa10.08□□□□□ -0.8
CLASP1-208ENST00000455322 SMC2O95347 1197 aa10.07□□□□□ -0.8
CLASP1-208ENST00000455322 CCDC173Q0VFZ6 552 aa10.07□□□□□ -0.8
CLASP1-208ENST00000455322 ZNF396Q96N95 335 aaPredicted RBP10.07□□□□□ -0.8
CLASP1-208ENST00000455322 STK3Q13188 491 aa10.07□□□□□ -0.8
CLASP1-208ENST00000455322 CCDC158Q5M9N0 1113 aa10.07□□□□□ -0.8
CLASP1-208ENST00000455322 RPGRIP1LQ68CZ1 1315 aa10.07□□□□□ -0.8
CLASP1-208ENST00000455322 SLFN5Q08AF3 891 aa10.07□□□□□ -0.8
CLASP1-208ENST00000455322 PROSER2Q86WR7 435 aaPredicted RBP10.07□□□□□ -0.8
CLASP1-208ENST00000455322 SLC52A1Q9NWF4 448 aa10.07□□□□□ -0.8
CLASP1-208ENST00000455322 RRP12Q5JTH9 1297 aaKnown RBP10.07□□□□□ -0.8
CLASP1-208ENST00000455322 CNNM1Q9NRU3 951 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms