RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 KRT27Q7Z3Y8 459 aa8.99□□□□□ -0.97
SBDSP1-204ENST00000453858 SPON1Q9HCB6 807 aa8.99□□□□□ -0.97
SBDSP1-204ENST00000453858 PLEKHH2Q8IVE3 1493 aa8.99□□□□□ -0.97
SBDSP1-204ENST00000453858 MST1RQ04912 1400 aa8.98□□□□□ -0.97
SBDSP1-204ENST00000453858 CHD4Q14839 1912 aa8.98□□□□□ -0.97
SBDSP1-204ENST00000453858 IRX5P78411 483 aaPredicted RBP8.98□□□□□ -0.97
SBDSP1-204ENST00000453858 MKRN3Q13064 507 aaKnown RBP8.98□□□□□ -0.97
SBDSP1-204ENST00000453858 C14orf37Q86TY3 774 aa8.98□□□□□ -0.97
SBDSP1-204ENST00000453858 EFCAB3Q8N7B9 438 aa8.98□□□□□ -0.97
SBDSP1-204ENST00000453858 TBX22Q9Y458 520 aa8.98□□□□□ -0.97
SBDSP1-204ENST00000453858 SOS2Q07890 1332 aaPredicted RBP8.98□□□□□ -0.97
SBDSP1-204ENST00000453858 ZNF644Q9H582 1327 aaPredicted RBP8.98□□□□□ -0.97
SBDSP1-204ENST00000453858 CFAP65Q6ZU64 1925 aaKnown RBP8.97□□□□□ -0.97
SBDSP1-204ENST00000453858 IDI1Q13907 227 aa8.97□□□□□ -0.97
SBDSP1-204ENST00000453858 POTEGQ6S5H5 508 aa8.97□□□□□ -0.97
SBDSP1-204ENST00000453858 UNC5CLQ8IV45 518 aa8.97□□□□□ -0.97
SBDSP1-204ENST00000453858 PLSCR2Q9NRY7 297 aa8.97□□□□□ -0.97
SBDSP1-204ENST00000453858 PPP1R1BQ9UD71 204 aaPredicted RBP8.97□□□□□ -0.97
SBDSP1-204ENST00000453858 LRRIQ1Q96JM4 1722 aa8.97□□□□□ -0.97
SBDSP1-204ENST00000453858 HSPA6P17066 643 aa8.96□□□□□ -0.98
SBDSP1-204ENST00000453858 DNAJC5GQ8N7S2 189 aa8.96□□□□□ -0.98
SBDSP1-204ENST00000453858 CFDP1Q9UEE9 299 aaPredicted RBP8.96□□□□□ -0.98
SBDSP1-204ENST00000453858 DCCP43146 1447 aa8.96□□□□□ -0.98
SBDSP1-204ENST00000453858 FMN1Q68DA7 1419 aa8.96□□□□□ -0.98
SBDSP1-204ENST00000453858 MYOM2P54296 1465 aa8.96□□□□□ -0.98
SBDSP1-204ENST00000453858 PPP1R15AO75807 674 aaPredicted RBP8.95□□□□□ -0.98
SBDSP1-204ENST00000453858 PLCG2P16885 1265 aa8.95□□□□□ -0.98
SBDSP1-204ENST00000453858 MFRPQ9BY79 579 aa8.95□□□□□ -0.98
SBDSP1-204ENST00000453858 PIK3C2BO00750 1634 aa8.94□□□□□ -0.98
SBDSP1-204ENST00000453858 LCE2DQ5TA82 110 aaPredicted RBP8.94□□□□□ -0.98
SBDSP1-204ENST00000453858 OCEL1Q9H607 264 aa8.94□□□□□ -0.98
SBDSP1-204ENST00000453858 ARHGAP31Q2M1Z3 1444 aa8.94□□□□□ -0.98
SBDSP1-204ENST00000453858 SLIT2O94813 1529 aa8.94□□□□□ -0.98
SBDSP1-204ENST00000453858 TSHZ2Q9NRE2 1034 aa8.93□□□□□ -0.98
SBDSP1-204ENST00000453858 EFCAB6Q5THR3 1501 aa8.93□□□□□ -0.98
SBDSP1-204ENST00000453858 LAMC1P11047 1609 aa8.93□□□□□ -0.98
SBDSP1-204ENST00000453858 FBXO22Q8NEZ5 403 aa8.92□□□□□ -0.98
SBDSP1-204ENST00000453858 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.91□□□□□ -0.98
SBDSP1-204ENST00000453858 COL22A1Q8NFW1 1626 aaPredicted RBP8.91□□□□□ -0.98
SBDSP1-204ENST00000453858 PLEKHG1Q9ULL1 1385 aa8.91□□□□□ -0.98
SBDSP1-204ENST00000453858 VPS72Q15906 364 aa8.91□□□□□ -0.98
SBDSP1-204ENST00000453858 PHF8Q9UPP1 1060 aa8.91□□□□□ -0.98
SBDSP1-204ENST00000453858 PTGER2P43116 358 aa8.9□□□□□ -0.98
SBDSP1-204ENST00000453858 SYT17Q9BSW7 474 aa8.9□□□□□ -0.98
SBDSP1-204ENST00000453858 ZFYVE9O95405 1425 aa8.89□□□□□ -0.99
SBDSP1-204ENST00000453858 ADAMTS13Q76LX8 1427 aa8.89□□□□□ -0.99
SBDSP1-204ENST00000453858 TNS4Q8IZW8 715 aa8.89□□□□□ -0.99
SBDSP1-204ENST00000453858 FAM163AQ96GL9 167 aaPredicted RBP8.89□□□□□ -0.99
SBDSP1-204ENST00000453858 BCANQ96GW7 911 aa8.89□□□□□ -0.99
SBDSP1-204ENST00000453858 PTPRUQ92729 1446 aa8.88□□□□□ -0.99
SBDSP1-204ENST00000453858 SHANK3Q9BYB0 1731 aa8.88□□□□□ -0.99
SBDSP1-204ENST00000453858 PIK3R4Q99570 1358 aa8.88□□□□□ -0.99
SBDSP1-204ENST00000453858 FAM83GA6ND36 823 aa8.88□□□□□ -0.99
SBDSP1-204ENST00000453858 FAM182BQ5T319 152 aa8.88□□□□□ -0.99
SBDSP1-204ENST00000453858 AMOTL2Q9Y2J4 779 aa8.88□□□□□ -0.99
SBDSP1-204ENST00000453858 MTUS2Q5JR59 1369 aa8.87□□□□□ -0.99
SBDSP1-204ENST00000453858 PARD3Q8TEW0 1356 aa8.87□□□□□ -0.99
SBDSP1-204ENST00000453858 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.87□□□□□ -0.99
SBDSP1-204ENST00000453858 RGPD1P0DJD0 1748 aa8.87□□□□□ -0.99
SBDSP1-204ENST00000453858 TNS1Q9HBL0 1735 aaKnown RBP8.87□□□□□ -0.99
SBDSP1-204ENST00000453858 ADGRB3O60242 1522 aa8.86□□□□□ -0.99
SBDSP1-204ENST00000453858 MARF1Q9Y4F3 1742 aaKnown RBP8.86□□□□□ -0.99
SBDSP1-204ENST00000453858 SLAIN1Q8ND83 568 aa8.86□□□□□ -0.99
SBDSP1-204ENST00000453858 ORAI2Q96SN7 254 aa8.86□□□□□ -0.99
SBDSP1-204ENST00000453858 C1orf167Q5SNV9 1468 aa8.85□□□□□ -0.99
SBDSP1-204ENST00000453858 NBPF8Q3BBV2 869 aa8.85□□□□□ -0.99
SBDSP1-204ENST00000453858 NBPF14Q5TI25 921 aa8.85□□□□□ -0.99
SBDSP1-204ENST00000453858 FHDC1Q9C0D6 1143 aaPredicted RBP8.85□□□□□ -0.99
SBDSP1-204ENST00000453858 PDGFDQ9GZP0 370 aaPredicted RBP8.85□□□□□ -0.99
SBDSP1-204ENST00000453858 PDCD7Q8N8D1 485 aaKnown RBP8.84□□□□□ -0.99
SBDSP1-204ENST00000453858 KDM2AQ9Y2K7 1162 aa8.84□□□□□ -0.99
SBDSP1-204ENST00000453858 TNRC18O15417 2968 aaPredicted RBP8.83□□□□□ -1
SBDSP1-204ENST00000453858 ADGRL3Q9HAR2 1447 aa8.83□□□□□ -1
SBDSP1-204ENST00000453858 TRIM37O94972 964 aa8.83□□□□□ -1
SBDSP1-204ENST00000453858 RSPH4AQ5TD94 716 aa8.83□□□□□ -1
SBDSP1-204ENST00000453858 TRPM2O94759 1503 aa8.83□□□□□ -1
SBDSP1-204ENST00000453858 CCNB3Q8WWL7 1395 aa8.83□□□□□ -1
SBDSP1-204ENST00000453858 A0A0C4DFX4 3053 aa8.83□□□□□ -1
SBDSP1-204ENST00000453858 RREB1Q92766 1687 aa8.82□□□□□ -1
SBDSP1-204ENST00000453858 APBA3O96018 575 aa8.82□□□□□ -1
SBDSP1-204ENST00000453858 MS4A4AQ96JQ5 239 aa8.82□□□□□ -1
SBDSP1-204ENST00000453858 CEP152O94986 1710 aa8.82□□□□□ -1
SBDSP1-204ENST00000453858 NRKQ7Z2Y5 1582 aa8.82□□□□□ -1
SBDSP1-204ENST00000453858 NUP188Q5SRE5 1749 aa8.81□□□□□ -1
SBDSP1-204ENST00000453858 FAM98CQ17RN3 349 aaKnown RBP8.81□□□□□ -1
SBDSP1-204ENST00000453858 JMYQ8N9B5 988 aa8.81□□□□□ -1
SBDSP1-204ENST00000453858 SLC52A1Q9NWF4 448 aa8.81□□□□□ -1
SBDSP1-204ENST00000453858 CCDC18Q5T9S5 1454 aa8.81□□□□□ -1
SBDSP1-204ENST00000453858 NOS1P29475 1434 aa8.8□□□□□ -1
SBDSP1-204ENST00000453858 CASKIN1Q8WXD9 1431 aa8.8□□□□□ -1
SBDSP1-204ENST00000453858 PPP1R37O75864 691 aa8.8□□□□□ -1
SBDSP1-204ENST00000453858 L3MBTL3Q96JM7 780 aaPredicted RBP8.8□□□□□ -1
SBDSP1-204ENST00000453858 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.8□□□□□ -1
SBDSP1-204ENST00000453858 CCDC141Q6ZP82 1450 aa8.8□□□□□ -1
SBDSP1-204ENST00000453858 MYOM1P52179 1685 aa8.8□□□□□ -1
SBDSP1-204ENST00000453858 RIMS2Q9UQ26 1411 aa8.8□□□□□ -1
SBDSP1-204ENST00000453858 APLP1P51693 650 aa8.79□□□□□ -1
SBDSP1-204ENST00000453858 CASZ1Q86V15 1759 aa8.78□□□□□ -1
SBDSP1-204ENST00000453858 PXDNQ92626 1479 aa8.78□□□□□ -1
SBDSP1-204ENST00000453858 MAP3K5Q99683 1374 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms