RNA–Protein interactions for RNA: ENST00000453560.6

RAP1B-208, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 530 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-208ENST00000453560 ACEP12821 1306 aa27.75■■■□□ 2.03
RAP1B-208ENST00000453560 PLEKHG5O94827 1062 aa27.75■■■□□ 2.03
RAP1B-208ENST00000453560 SRPK2P78362 688 aaKnown RBP27.74■■■□□ 2.03
RAP1B-208ENST00000453560 UNC5CLQ8IV45 518 aa27.74■■■□□ 2.03
RAP1B-208ENST00000453560 PPIP5K1Q6PFW1 1433 aa27.74■■■□□ 2.03
RAP1B-208ENST00000453560 EP400Q96L91 3159 aa27.74■■■□□ 2.03
RAP1B-208ENST00000453560 PHRF1Q9P1Y6 1649 aaKnown RBP27.74■■■□□ 2.03
RAP1B-208ENST00000453560 GLI3P10071 1580 aa27.73■■■□□ 2.03
RAP1B-208ENST00000453560 PAK3O75914 559 aaPredicted RBP27.73■■■□□ 2.03
RAP1B-208ENST00000453560 CABP2Q9NPB3 220 aa27.73■■■□□ 2.03
RAP1B-208ENST00000453560 RALGAPBQ86X10 1494 aa27.72■■■□□ 2.03
RAP1B-208ENST00000453560 COL14A1Q05707 1796 aaKnown RBP27.72■■■□□ 2.03
RAP1B-208ENST00000453560 NRAPQ86VF7 1730 aa27.72■■■□□ 2.03
RAP1B-208ENST00000453560 UPF1Q92900 1129 aaKnown RBP eCLIP27.71■■■□□ 2.03
RAP1B-208ENST00000453560 GJD4Q96KN9 370 aaPredicted RBP27.71■■■□□ 2.03
RAP1B-208ENST00000453560 FAM83GA6ND36 823 aa27.68■■■□□ 2.02
RAP1B-208ENST00000453560 EVC2Q86UK5 1308 aa27.67■■■□□ 2.02
RAP1B-208ENST00000453560 SBNO2Q9Y2G9 1366 aa27.64■■■□□ 2.02
RAP1B-208ENST00000453560 VPS72Q15906 364 aa27.63■■■□□ 2.01
RAP1B-208ENST00000453560 CARD11Q9BXL7 1154 aa27.63■■■□□ 2.01
RAP1B-208ENST00000453560 NRKQ7Z2Y5 1582 aa27.62■■■□□ 2.01
RAP1B-208ENST00000453560 BRD4O60885 1362 aaPredicted RBP27.61■■■□□ 2.01
RAP1B-208ENST00000453560 AKAP12Q02952 1782 aa27.61■■■□□ 2.01
RAP1B-208ENST00000453560 USP6P35125 1406 aa27.61■■■□□ 2.01
RAP1B-208ENST00000453560 CABP1Q9NZU7 370 aa27.61■■■□□ 2.01
RAP1B-208ENST00000453560 ATAD2Q6PL18 1390 aa27.6■■■□□ 2.01
RAP1B-208ENST00000453560 BRWD3Q6RI45 1802 aa27.6■■■□□ 2.01
RAP1B-208ENST00000453560 BTG4Q9NY30 223 aa27.59■■■□□ 2.01
RAP1B-208ENST00000453560 NUTM2GQ5VZR2 741 aa27.58■■■□□ 2.01
RAP1B-208ENST00000453560 ABTB2Q8N961 1025 aa27.58■■■□□ 2.01
RAP1B-208ENST00000453560 USP19O94966 1318 aa27.57■■■□□ 2
RAP1B-208ENST00000453560 KIAA0232Q92628 1395 aa27.57■■■□□ 2
RAP1B-208ENST00000453560 SSH2Q76I76 1423 aa27.57■■■□□ 2
RAP1B-208ENST00000453560 PRDM11Q9NQV5 511 aa27.56■■■□□ 2
RAP1B-208ENST00000453560 PIK3C2AO00443 1686 aa27.56■■■□□ 2
RAP1B-208ENST00000453560 ONECUT3O60422 494 aaPredicted RBP27.53■■■□□ 2
RAP1B-208ENST00000453560 CCDC9Q9Y3X0 531 aaKnown RBP27.53■■■□□ 2
RAP1B-208ENST00000453560 MON2Q7Z3U7 1717 aa27.52■■■□□ 2
RAP1B-208ENST00000453560 LMO7Q8WWI1 1683 aa27.52■■■□□ 2
RAP1B-208ENST00000453560 NLRP13Q86W25 1043 aa27.51■■□□□ 1.99
RAP1B-208ENST00000453560 CPSF1Q10570 1443 aaKnown RBP27.5■■□□□ 1.99
RAP1B-208ENST00000453560 CPDO75976 1380 aa27.5■■□□□ 1.99
RAP1B-208ENST00000453560 ZC3H6P61129 1189 aaKnown RBP27.5■■□□□ 1.99
RAP1B-208ENST00000453560 SLIT3O75094 1523 aa27.5■■□□□ 1.99
RAP1B-208ENST00000453560 CHRNA2Q15822 529 aa27.48■■□□□ 1.99
RAP1B-208ENST00000453560 SEPT12Q8IYM1 358 aa27.48■■□□□ 1.99
RAP1B-208ENST00000453560 ZNF692Q9BU19 519 aaPredicted RBP27.47■■□□□ 1.99
RAP1B-208ENST00000453560 SPATA31A5Q5VU36 1347 aa27.46■■□□□ 1.99
RAP1B-208ENST00000453560 SPATA31A7Q8IWB4 1347 aa27.46■■□□□ 1.99
RAP1B-208ENST00000453560 THSD7AQ9UPZ6 1657 aa27.46■■□□□ 1.99
RAP1B-208ENST00000453560 CLSPNQ9HAW4 1339 aa27.45■■□□□ 1.99
RAP1B-208ENST00000453560 GCP02774 474 aa27.45■■□□□ 1.98
RAP1B-208ENST00000453560 CAMTA1Q9Y6Y1 1673 aa27.45■■□□□ 1.98
RAP1B-208ENST00000453560 CD163L1Q9NR16 1453 aa27.44■■□□□ 1.98
RAP1B-208ENST00000453560 NLRP6P59044 892 aa27.43■■□□□ 1.98
RAP1B-208ENST00000453560 TTC21BQ7Z4L5 1316 aa27.42■■□□□ 1.98
RAP1B-208ENST00000453560 FAM98CQ17RN3 349 aaKnown RBP27.42■■□□□ 1.98
RAP1B-208ENST00000453560 TESK2Q96S53 571 aa27.42■■□□□ 1.98
RAP1B-208ENST00000453560 KTN1Q86UP2 1357 aaKnown RBP27.42■■□□□ 1.98
RAP1B-208ENST00000453560 PCGF6Q9BYE7 350 aa27.41■■□□□ 1.98
RAP1B-208ENST00000453560 TTC21AQ8NDW8 1320 aa27.41■■□□□ 1.98
RAP1B-208ENST00000453560 USP54Q70EL1 1684 aa27.4■■□□□ 1.98
RAP1B-208ENST00000453560 SPATA31A1Q5TZJ5 1347 aa27.4■■□□□ 1.98
RAP1B-208ENST00000453560 ST20-MTHFSA0A0A6YYL1 179 aa27.39■■□□□ 1.98
RAP1B-208ENST00000453560 CCDC125Q86Z20 511 aa27.39■■□□□ 1.98
RAP1B-208ENST00000453560 PUS7Q96PZ0 661 aaKnown RBP27.39■■□□□ 1.98
RAP1B-208ENST00000453560 STRN4Q9NRL3 753 aa27.39■■□□□ 1.98
RAP1B-208ENST00000453560 TIMELESSQ9UNS1 1208 aa27.39■■□□□ 1.98
RAP1B-208ENST00000453560 COL18A1P39060 1754 aa27.39■■□□□ 1.98
RAP1B-208ENST00000453560 KRT27Q7Z3Y8 459 aa27.38■■□□□ 1.97
RAP1B-208ENST00000453560 COL5A2P05997 1499 aaPredicted RBP27.37■■□□□ 1.97
RAP1B-208ENST00000453560 A0A0G2JS52 829 aa27.36■■□□□ 1.97
RAP1B-208ENST00000453560 MYT1Q01538 1121 aa27.36■■□□□ 1.97
RAP1B-208ENST00000453560 BLMP54132 1417 aaPredicted RBP27.35■■□□□ 1.97
RAP1B-208ENST00000453560 AATKQ6ZMQ8 1374 aa27.35■■□□□ 1.97
RAP1B-208ENST00000453560 USP47Q96K76 1375 aa27.35■■□□□ 1.97
RAP1B-208ENST00000453560 NFAT5O94916 1531 aa27.34■■□□□ 1.97
RAP1B-208ENST00000453560 TMC1Q8TDI8 760 aa27.33■■□□□ 1.97
RAP1B-208ENST00000453560 SLC12A5Q9H2X9 1139 aa27.33■■□□□ 1.97
RAP1B-208ENST00000453560 SLC24A1O60721 1099 aa27.32■■□□□ 1.96
RAP1B-208ENST00000453560 EVA1CP58658 441 aa27.32■■□□□ 1.96
RAP1B-208ENST00000453560 LARP1Q6PKG0 1096 aaKnown RBP27.32■■□□□ 1.96
RAP1B-208ENST00000453560 A0A1W2PP64 1363 aa27.32■■□□□ 1.96
RAP1B-208ENST00000453560 NINLQ9Y2I6 1382 aa27.31■■□□□ 1.96
RAP1B-208ENST00000453560 EDC4Q6P2E9 1401 aaKnown RBP27.31■■□□□ 1.96
RAP1B-208ENST00000453560 RGPD5Q99666 1765 aa27.3■■□□□ 1.96
RAP1B-208ENST00000453560 HDGFL2Q7Z4V5 671 aaPredicted RBP27.3■■□□□ 1.96
RAP1B-208ENST00000453560 KCNH5Q8NCM2 988 aa27.3■■□□□ 1.96
RAP1B-208ENST00000453560 USP31Q70CQ4 1352 aa27.3■■□□□ 1.96
RAP1B-208ENST00000453560 BARGINQ6ZT62 677 aa27.28■■□□□ 1.96
RAP1B-208ENST00000453560 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.28■■□□□ 1.96
RAP1B-208ENST00000453560 TERF2IPQ9NYB0 399 aa27.28■■□□□ 1.96
RAP1B-208ENST00000453560 USP35Q9P2H5 1018 aa27.28■■□□□ 1.96
RAP1B-208ENST00000453560 ARHGEF25Q86VW2 580 aa27.27■■□□□ 1.96
RAP1B-208ENST00000453560 PARP4Q9UKK3 1724 aaKnown RBP27.27■■□□□ 1.96
RAP1B-208ENST00000453560 ABCC6O95255 1503 aa27.26■■□□□ 1.96
RAP1B-208ENST00000453560 CRB1P82279 1406 aa27.26■■□□□ 1.95
RAP1B-208ENST00000453560 ZBTB7CA1YPR0 619 aa27.26■■□□□ 1.95
RAP1B-208ENST00000453560 LTN1O94822 1766 aa27.25■■□□□ 1.95
RAP1B-208ENST00000453560 RGPD1P0DJD0 1748 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms