RNA–Protein interactions for RNA: ENST00000453024.5

CTNNB1-210, Transcript of catenin beta 1, humanhuman

TSL 2 BASIC

Gene CTNNB1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-210ENST00000453024 NSFL1CQ9UNZ2 370 aaKnown RBP20.48■□□□□ 0.87
CTNNB1-210ENST00000453024 TAF3Q5VWG9 929 aa20.46■□□□□ 0.87
CTNNB1-210ENST00000453024 WDR63Q8IWG1 891 aa20.46■□□□□ 0.87
CTNNB1-210ENST00000453024 PDCL2Q8N4E4 241 aa20.46■□□□□ 0.87
CTNNB1-210ENST00000453024 CHAMP1Q96JM3 812 aa20.46■□□□□ 0.87
CTNNB1-210ENST00000453024 PHF23Q9BUL5 403 aaPredicted RBP20.46■□□□□ 0.87
CTNNB1-210ENST00000453024 MYO5CQ9NQX4 1742 aa20.46■□□□□ 0.87
CTNNB1-210ENST00000453024 BMP2KLQ5H9B9 411 aa20.46■□□□□ 0.87
CTNNB1-210ENST00000453024 C17orf53Q8N3J3 647 aaPredicted RBP20.46■□□□□ 0.87
CTNNB1-210ENST00000453024 NUP160Q12769 1436 aa20.46■□□□□ 0.87
CTNNB1-210ENST00000453024 NOLC1Q14978 699 aaKnown RBP eCLIP20.45■□□□□ 0.861e-6■■□□□ 12.1
CTNNB1-210ENST00000453024 CDCA8Q53HL2 280 aa20.45■□□□□ 0.86
CTNNB1-210ENST00000453024 TBC1D9Q6ZT07 1266 aa20.45■□□□□ 0.86
CTNNB1-210ENST00000453024 PIBF1Q8WXW3 757 aa20.45■□□□□ 0.86
CTNNB1-210ENST00000453024 TRIM27P14373 513 aa20.45■□□□□ 0.86
CTNNB1-210ENST00000453024 U2AF2P26368 475 aaKnown RBP eCLIP20.45■□□□□ 0.863e-9■□□□□ 10.3
CTNNB1-210ENST00000453024 RUNDC1Q96C34 613 aa20.45■□□□□ 0.86
CTNNB1-210ENST00000453024 SHANK2Q9UPX8 1470 aa20.44■□□□□ 0.86
CTNNB1-210ENST00000453024 PLCD3Q8N3E9 789 aa20.44■□□□□ 0.86
CTNNB1-210ENST00000453024 DDX19BQ9UMR2 479 aa20.44■□□□□ 0.86
CTNNB1-210ENST00000453024 TSPY4P0CV99 314 aa20.44■□□□□ 0.86
CTNNB1-210ENST00000453024 TSPY10P0CW01 314 aa20.44■□□□□ 0.86
CTNNB1-210ENST00000453024 CHD1LQ86WJ1 897 aa20.44■□□□□ 0.86
CTNNB1-210ENST00000453024 CDC42BPAQ5VT25 1732 aa20.43■□□□□ 0.86
CTNNB1-210ENST00000453024 MYOM1P52179 1685 aa20.43■□□□□ 0.86
CTNNB1-210ENST00000453024 RNF17Q9BXT8 1623 aaKnown RBP20.43■□□□□ 0.86
CTNNB1-210ENST00000453024 URB2Q14146 1524 aaKnown RBP20.42■□□□□ 0.86
CTNNB1-210ENST00000453024 RAPGEF6Q8TEU7 1601 aa20.42■□□□□ 0.86
CTNNB1-210ENST00000453024 ZNF771Q7L3S4 317 aaPredicted RBP20.41■□□□□ 0.86
CTNNB1-210ENST00000453024 SMC4Q9NTJ3 1288 aa20.41■□□□□ 0.86
CTNNB1-210ENST00000453024 POLR3AO14802 1390 aaPredicted RBP20.41■□□□□ 0.86
CTNNB1-210ENST00000453024 ZDHHC9Q9Y397 364 aa20.4■□□□□ 0.86
CTNNB1-210ENST00000453024 IQSEC2Q5JU85 1478 aa20.4■□□□□ 0.86
CTNNB1-210ENST00000453024 ZBTB40Q9NUA8 1239 aa20.4■□□□□ 0.86
CTNNB1-210ENST00000453024 PBRM1Q86U86 1689 aa20.39■□□□□ 0.86
CTNNB1-210ENST00000453024 SYNJ2O15056 1496 aa20.39■□□□□ 0.85
CTNNB1-210ENST00000453024 TAF7LQ5H9L4 462 aa20.39■□□□□ 0.85
CTNNB1-210ENST00000453024 CARD14Q9BXL6 1004 aa20.39■□□□□ 0.85
CTNNB1-210ENST00000453024 TTC12Q9H892 705 aaPredicted RBP20.39■□□□□ 0.85
CTNNB1-210ENST00000453024 KANK1Q14678 1352 aa20.39■□□□□ 0.85
CTNNB1-210ENST00000453024 FKBP5Q13451 457 aaPredicted RBP20.38■□□□□ 0.85
CTNNB1-210ENST00000453024 ZGPATQ8N5A5 531 aaKnown RBP20.38■□□□□ 0.85
CTNNB1-210ENST00000453024 TMEM57Q8N5G2 664 aa20.38■□□□□ 0.85
CTNNB1-210ENST00000453024 TSPY26PQ9H489 355 aa20.37■□□□□ 0.85
CTNNB1-210ENST00000453024 CFAP74Q9C0B2 1584 aa20.37■□□□□ 0.85
CTNNB1-210ENST00000453024 ATF7IPQ6VMQ6 1270 aa20.37■□□□□ 0.85
CTNNB1-210ENST00000453024 RABEP1Q15276 862 aa20.36■□□□□ 0.85
CTNNB1-210ENST00000453024 ANKRD7Q92527 254 aa20.36■□□□□ 0.85
CTNNB1-210ENST00000453024 TSR2Q969E8 191 aaKnown RBP20.36■□□□□ 0.85
CTNNB1-210ENST00000453024 CDK11BP21127 795 aaKnown RBP20.36■□□□□ 0.85
CTNNB1-210ENST00000453024 IQGAP1P46940 1657 aa20.36■□□□□ 0.85
CTNNB1-210ENST00000453024 HNRNPMP52272 730 aaKnown RBP eCLIP20.35■□□□□ 0.858e-8■■■□□ 18.5
CTNNB1-210ENST00000453024 SSH1Q8WYL5 1049 aa20.35■□□□□ 0.85
CTNNB1-210ENST00000453024 SPTLC3Q9NUV7 552 aa20.35■□□□□ 0.85
CTNNB1-210ENST00000453024 ANKRD45Q5TZF3 282 aa20.35■□□□□ 0.85
CTNNB1-210ENST00000453024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.35■□□□□ 0.851e-7■■■■□ 25.3
CTNNB1-210ENST00000453024 IRX5P78411 483 aaPredicted RBP20.35■□□□□ 0.85
CTNNB1-210ENST00000453024 NOB1Q9ULX3 412 aaKnown RBP20.35■□□□□ 0.85
CTNNB1-210ENST00000453024 SHPRHQ149N8 1683 aa20.34■□□□□ 0.85
CTNNB1-210ENST00000453024 FOXD4L5Q5VV16 416 aaPredicted RBP20.34■□□□□ 0.85
CTNNB1-210ENST00000453024 FOXD4L4Q8WXT5 416 aaPredicted RBP20.34■□□□□ 0.85
CTNNB1-210ENST00000453024 DISP1Q96F81 1524 aa20.34■□□□□ 0.85
CTNNB1-210ENST00000453024 CCDC27Q2M243 656 aa20.34■□□□□ 0.85
CTNNB1-210ENST00000453024 CWC22Q9HCG8 908 aaKnown RBP20.34■□□□□ 0.85
CTNNB1-210ENST00000453024 RIOK3O14730 519 aaKnown RBP20.33■□□□□ 0.85
CTNNB1-210ENST00000453024 KIAA0556O60303 1618 aa20.33■□□□□ 0.85
CTNNB1-210ENST00000453024 EXOSC9Q06265 439 aaKnown RBP20.32■□□□□ 0.84
CTNNB1-210ENST00000453024 MBD3O95983 291 aa20.31■□□□□ 0.84
CTNNB1-210ENST00000453024 KCNJ4P48050 445 aa20.31■□□□□ 0.84
CTNNB1-210ENST00000453024 MAPK8IP2Q13387 824 aaPredicted RBP20.31■□□□□ 0.84
CTNNB1-210ENST00000453024 FEZ1Q99689 392 aa20.31■□□□□ 0.84
CTNNB1-210ENST00000453024 USP25Q9UHP3 1055 aa20.31■□□□□ 0.84
CTNNB1-210ENST00000453024 OGFRQ9NZT2 677 aa20.31■□□□□ 0.84
CTNNB1-210ENST00000453024 CDC45O75419 566 aa20.3■□□□□ 0.84
CTNNB1-210ENST00000453024 SCAF11Q99590 1463 aaKnown RBP20.29■□□□□ 0.84
CTNNB1-210ENST00000453024 CTIFO43310 598 aaKnown RBP20.28■□□□□ 0.84
CTNNB1-210ENST00000453024 CT47B1P0C2W7 299 aaPredicted RBP20.28■□□□□ 0.84
CTNNB1-210ENST00000453024 SLFN14P0C7P3 912 aa20.28■□□□□ 0.84
CTNNB1-210ENST00000453024 ADCY5O95622 1261 aa20.27■□□□□ 0.84
CTNNB1-210ENST00000453024 DIAPH3Q9NSV4 1193 aa20.27■□□□□ 0.84
CTNNB1-210ENST00000453024 GABPB1Q06547 395 aaPredicted RBP20.27■□□□□ 0.84
CTNNB1-210ENST00000453024 CEP152O94986 1710 aa20.27■□□□□ 0.84
CTNNB1-210ENST00000453024 PDS5BQ9NTI5 1447 aa20.27■□□□□ 0.84
CTNNB1-210ENST00000453024 PAXIP1Q6ZW49 1069 aaPredicted RBP20.26■□□□□ 0.83
CTNNB1-210ENST00000453024 KDM5AP29375 1690 aaKnown RBP20.26■□□□□ 0.83
CTNNB1-210ENST00000453024 CHAF1AQ13111 956 aaPredicted RBP20.25■□□□□ 0.83
CTNNB1-210ENST00000453024 MORC1Q86VD1 984 aa20.25■□□□□ 0.83
CTNNB1-210ENST00000453024 USP26Q9BXU7 913 aa20.25■□□□□ 0.83
CTNNB1-210ENST00000453024 MADDQ8WXG6 1647 aa20.25■□□□□ 0.83
CTNNB1-210ENST00000453024 GSPT1P15170 499 aaKnown RBP20.24■□□□□ 0.83
CTNNB1-210ENST00000453024 PPIP5K1Q6PFW1 1433 aa20.24■□□□□ 0.83
CTNNB1-210ENST00000453024 AEBP2Q6ZN18 517 aaPredicted RBP20.24■□□□□ 0.83
CTNNB1-210ENST00000453024 CTNNA3Q9UI47 895 aa20.24■□□□□ 0.83
CTNNB1-210ENST00000453024 NCBP1Q09161 790 aaKnown RBP20.23■□□□□ 0.83
CTNNB1-210ENST00000453024 UVSSAQ2YD98 709 aa20.23■□□□□ 0.83
CTNNB1-210ENST00000453024 PLB1Q6P1J6 1458 aa20.23■□□□□ 0.83
CTNNB1-210ENST00000453024 NOS1P29475 1434 aa20.23■□□□□ 0.83
CTNNB1-210ENST00000453024 KIAA1524Q8TCG1 905 aa20.23■□□□□ 0.83
CTNNB1-210ENST00000453024 GCC1Q96CN9 775 aa20.23■□□□□ 0.83
CTNNB1-210ENST00000453024 C1orf115Q9H7X2 142 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms