RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 CCDC9Q9Y3X0 531 aaKnown RBP26.58■■□□□ 1.85
PDLIM2-214ENST00000452226 CRYBG1Q9Y4K1 1723 aa26.54■■□□□ 1.84
PDLIM2-214ENST00000452226 SEPT12Q8IYM1 358 aa26.54■■□□□ 1.84
PDLIM2-214ENST00000452226 SRCAPQ6ZRS2 3230 aa26.54■■□□□ 1.84
PDLIM2-214ENST00000452226 COL14A1Q05707 1796 aaKnown RBP26.53■■□□□ 1.84
PDLIM2-214ENST00000452226 BTG4Q9NY30 223 aa26.53■■□□□ 1.84
PDLIM2-214ENST00000452226 TOPAZ1Q8N9V7 1692 aa26.53■■□□□ 1.84
PDLIM2-214ENST00000452226 NRAPQ86VF7 1730 aa26.53■■□□□ 1.84
PDLIM2-214ENST00000452226 SF3B2Q13435 895 aaKnown RBP26.52■■□□□ 1.84
PDLIM2-214ENST00000452226 CCDC61Q9Y6R9 512 aa26.52■■□□□ 1.84
PDLIM2-214ENST00000452226 ONECUT3O60422 494 aaPredicted RBP26.51■■□□□ 1.83
PDLIM2-214ENST00000452226 L3MBTL2Q969R5 705 aa26.51■■□□□ 1.83
PDLIM2-214ENST00000452226 POLR3AO14802 1390 aaPredicted RBP26.49■■□□□ 1.83
PDLIM2-214ENST00000452226 ACEP12821 1306 aa26.49■■□□□ 1.83
PDLIM2-214ENST00000452226 CENPJQ9HC77 1338 aaPredicted RBP26.49■■□□□ 1.83
PDLIM2-214ENST00000452226 BLMP54132 1417 aaPredicted RBP26.48■■□□□ 1.83
PDLIM2-214ENST00000452226 NBPF8Q3BBV2 869 aa26.48■■□□□ 1.83
PDLIM2-214ENST00000452226 SIN3AQ96ST3 1273 aa26.48■■□□□ 1.83
PDLIM2-214ENST00000452226 PLEKHG3A1L390 1219 aa26.47■■□□□ 1.83
PDLIM2-214ENST00000452226 PRDM11Q9NQV5 511 aa26.47■■□□□ 1.83
PDLIM2-214ENST00000452226 SRPK2P78362 688 aaKnown RBP26.46■■□□□ 1.83
PDLIM2-214ENST00000452226 QRICH2Q9H0J4 1663 aa26.45■■□□□ 1.82
PDLIM2-214ENST00000452226 A0A0G2JS52 829 aa26.45■■□□□ 1.82
PDLIM2-214ENST00000452226 MYT1Q01538 1121 aa26.45■■□□□ 1.82
PDLIM2-214ENST00000452226 NUTM2GQ5VZR2 741 aa26.45■■□□□ 1.82
PDLIM2-214ENST00000452226 PHRF1Q9P1Y6 1649 aaKnown RBP26.44■■□□□ 1.82
PDLIM2-214ENST00000452226 FAM98CQ17RN3 349 aaKnown RBP26.44■■□□□ 1.82
PDLIM2-214ENST00000452226 KRT27Q7Z3Y8 459 aa26.44■■□□□ 1.82
PDLIM2-214ENST00000452226 NEUROD1Q13562 356 aa26.43■■□□□ 1.82
PDLIM2-214ENST00000452226 KIAA0232Q92628 1395 aa26.43■■□□□ 1.82
PDLIM2-214ENST00000452226 CABP2Q9NPB3 220 aa26.42■■□□□ 1.82
PDLIM2-214ENST00000452226 PPIP5K1Q6PFW1 1433 aa26.41■■□□□ 1.82
PDLIM2-214ENST00000452226 SPATA31A5Q5VU36 1347 aa26.4■■□□□ 1.82
PDLIM2-214ENST00000452226 SPATA31A7Q8IWB4 1347 aa26.4■■□□□ 1.82
PDLIM2-214ENST00000452226 TRPM1Q7Z4N2 1603 aa26.4■■□□□ 1.82
PDLIM2-214ENST00000452226 ZC3H6P61129 1189 aaKnown RBP26.4■■□□□ 1.82
PDLIM2-214ENST00000452226 CHRNA2Q15822 529 aa26.4■■□□□ 1.82
PDLIM2-214ENST00000452226 ABTB2Q8N961 1025 aa26.39■■□□□ 1.82
PDLIM2-214ENST00000452226 DEFB132Q7Z7B7 95 aa26.35■■□□□ 1.81
PDLIM2-214ENST00000452226 ROCK2O75116 1388 aaKnown RBP26.34■■□□□ 1.81
PDLIM2-214ENST00000452226 STRN4Q9NRL3 753 aa26.34■■□□□ 1.81
PDLIM2-214ENST00000452226 CABP1Q9NZU7 370 aa26.34■■□□□ 1.81
PDLIM2-214ENST00000452226 NRKQ7Z2Y5 1582 aa26.33■■□□□ 1.81
PDLIM2-214ENST00000452226 NLRP13Q86W25 1043 aa26.32■■□□□ 1.8
PDLIM2-214ENST00000452226 USP19O94966 1318 aa26.32■■□□□ 1.8
PDLIM2-214ENST00000452226 SPATA31A1Q5TZJ5 1347 aa26.32■■□□□ 1.8
PDLIM2-214ENST00000452226 EVC2Q86UK5 1308 aa26.32■■□□□ 1.8
PDLIM2-214ENST00000452226 THSD7AQ9UPZ6 1657 aa26.31■■□□□ 1.8
PDLIM2-214ENST00000452226 BAG6P46379 1132 aa26.31■■□□□ 1.8
PDLIM2-214ENST00000452226 BRD4O60885 1362 aaPredicted RBP26.31■■□□□ 1.8
PDLIM2-214ENST00000452226 PCGF6Q9BYE7 350 aa26.3■■□□□ 1.8
PDLIM2-214ENST00000452226 EVA1CP58658 441 aa26.29■■□□□ 1.8
PDLIM2-214ENST00000452226 CPDO75976 1380 aa26.29■■□□□ 1.8
PDLIM2-214ENST00000452226 GCP02774 474 aa26.28■■□□□ 1.8
PDLIM2-214ENST00000452226 FAM182BQ5T319 152 aa26.28■■□□□ 1.8
PDLIM2-214ENST00000452226 USP6P35125 1406 aa26.28■■□□□ 1.8
PDLIM2-214ENST00000452226 CAMTA1Q9Y6Y1 1673 aa26.27■■□□□ 1.8
PDLIM2-214ENST00000452226 SSH2Q76I76 1423 aa26.26■■□□□ 1.79
PDLIM2-214ENST00000452226 LMO7Q8WWI1 1683 aa26.25■■□□□ 1.79
PDLIM2-214ENST00000452226 USP35Q9P2H5 1018 aa26.25■■□□□ 1.79
PDLIM2-214ENST00000452226 NLRP6P59044 892 aa26.24■■□□□ 1.79
PDLIM2-214ENST00000452226 RGPD1P0DJD0 1748 aa26.23■■□□□ 1.79
PDLIM2-214ENST00000452226 LARP1Q6PKG0 1096 aaKnown RBP26.23■■□□□ 1.79
PDLIM2-214ENST00000452226 BARGINQ6ZT62 677 aa26.2■■□□□ 1.78
PDLIM2-214ENST00000452226 PIK3C2AO00443 1686 aa26.19■■□□□ 1.78
PDLIM2-214ENST00000452226 AKAP12Q02952 1782 aa26.19■■□□□ 1.78
PDLIM2-214ENST00000452226 ZBTB7CA1YPR0 619 aa26.18■■□□□ 1.78
PDLIM2-214ENST00000452226 TCP11L2Q8N4U5 519 aa26.18■■□□□ 1.78
PDLIM2-214ENST00000452226 ZNF692Q9BU19 519 aaPredicted RBP26.18■■□□□ 1.78
PDLIM2-214ENST00000452226 SLIT3O75094 1523 aa26.18■■□□□ 1.78
PDLIM2-214ENST00000452226 TONSLQ96HA7 1378 aa26.17■■□□□ 1.78
PDLIM2-214ENST00000452226 EN1Q05925 392 aaPredicted RBP26.16■■□□□ 1.78
PDLIM2-214ENST00000452226 FAM196AQ6ZSG2 479 aa26.16■■□□□ 1.78
PDLIM2-214ENST00000452226 CARD11Q9BXL7 1154 aa26.16■■□□□ 1.78
PDLIM2-214ENST00000452226 TNS1Q9HBL0 1735 aaKnown RBP26.16■■□□□ 1.78
PDLIM2-214ENST00000452226 COL5A2P05997 1499 aaPredicted RBP26.16■■□□□ 1.78
PDLIM2-214ENST00000452226 TTC21BQ7Z4L5 1316 aa26.14■■□□□ 1.78
PDLIM2-214ENST00000452226 PDE3BQ13370 1112 aa26.14■■□□□ 1.78
PDLIM2-214ENST00000452226 THRAP3Q9Y2W1 955 aaKnown RBP26.14■■□□□ 1.78
PDLIM2-214ENST00000452226 AATKQ6ZMQ8 1374 aa26.14■■□□□ 1.78
PDLIM2-214ENST00000452226 SBNO2Q9Y2G9 1366 aa26.13■■□□□ 1.77
PDLIM2-214ENST00000452226 PSDA5PKW4 1024 aaPredicted RBP26.12■■□□□ 1.77
PDLIM2-214ENST00000452226 TRIM37O94972 964 aa26.12■■□□□ 1.77
PDLIM2-214ENST00000452226 CPSF1Q10570 1443 aaKnown RBP26.12■■□□□ 1.77
PDLIM2-214ENST00000452226 CLSPNQ9HAW4 1339 aa26.12■■□□□ 1.77
PDLIM2-214ENST00000452226 KTN1Q86UP2 1357 aaKnown RBP26.11■■□□□ 1.77
PDLIM2-214ENST00000452226 DISP2A7MBM2 1401 aa26.11■■□□□ 1.77
PDLIM2-214ENST00000452226 CRB1P82279 1406 aa26.11■■□□□ 1.77
PDLIM2-214ENST00000452226 TTC21AQ8NDW8 1320 aa26.11■■□□□ 1.77
PDLIM2-214ENST00000452226 COL18A1P39060 1754 aa26.1■■□□□ 1.77
PDLIM2-214ENST00000452226 PARP4Q9UKK3 1724 aaKnown RBP26.08■■□□□ 1.77
PDLIM2-214ENST00000452226 KCNH5Q8NCM2 988 aa26.08■■□□□ 1.77
PDLIM2-214ENST00000452226 MON2Q7Z3U7 1717 aa26.08■■□□□ 1.76
PDLIM2-214ENST00000452226 LRP5O75197 1615 aa26.07■■□□□ 1.76
PDLIM2-214ENST00000452226 SOX12O15370 315 aa26.07■■□□□ 1.76
PDLIM2-214ENST00000452226 EZH2Q15910 746 aaKnown RBP26.06■■□□□ 1.76
PDLIM2-214ENST00000452226 ARHGEF25Q86VW2 580 aa26.06■■□□□ 1.76
PDLIM2-214ENST00000452226 AXIN2Q9Y2T1 843 aa26.06■■□□□ 1.76
PDLIM2-214ENST00000452226 RGPD5Q99666 1765 aa26.05■■□□□ 1.76
PDLIM2-214ENST00000452226 APBA3O96018 575 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms