RNA–Protein interactions for RNA: ENST00000451686.5

ITSN1-220, Transcript of intersectin 1, humanhuman

TSL 4

Gene ITSN1, Length 501 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-220ENST00000451686 ACEP12821 1306 aa31.23■■■□□ 2.59
ITSN1-220ENST00000451686 CARD11Q9BXL7 1154 aa31.21■■■□□ 2.59
ITSN1-220ENST00000451686 NRKQ7Z2Y5 1582 aa31.21■■■□□ 2.59
ITSN1-220ENST00000451686 SRPK2P78362 688 aaKnown RBP31.2■■■□□ 2.59
ITSN1-220ENST00000451686 CABLES1Q8TDN4 633 aa31.2■■■□□ 2.59
ITSN1-220ENST00000451686 EVC2Q86UK5 1308 aa31.2■■■□□ 2.58
ITSN1-220ENST00000451686 COL14A1Q05707 1796 aaKnown RBP31.2■■■□□ 2.58
ITSN1-220ENST00000451686 MON2Q7Z3U7 1717 aa31.19■■■□□ 2.58
ITSN1-220ENST00000451686 USP21Q9UK80 565 aa31.18■■■□□ 2.58
ITSN1-220ENST00000451686 RGS12O14924 1447 aa31.17■■■□□ 2.58
ITSN1-220ENST00000451686 SSH2Q76I76 1423 aa31.16■■■□□ 2.58
ITSN1-220ENST00000451686 RXRBP28702 533 aa31.16■■■□□ 2.58
ITSN1-220ENST00000451686 QTRT2Q9H974 415 aaKnown RBP31.16■■■□□ 2.58
ITSN1-220ENST00000451686 GLI3P10071 1580 aa31.16■■■□□ 2.58
ITSN1-220ENST00000451686 PIK3C2AO00443 1686 aa31.15■■■□□ 2.58
ITSN1-220ENST00000451686 BRD4O60885 1362 aaPredicted RBP31.15■■■□□ 2.58
ITSN1-220ENST00000451686 USP6P35125 1406 aa31.15■■■□□ 2.58
ITSN1-220ENST00000451686 RBM6P78332 1123 aaKnown RBP31.14■■■□□ 2.58
ITSN1-220ENST00000451686 TIMELESSQ9UNS1 1208 aa31.13■■■□□ 2.57
ITSN1-220ENST00000451686 LMOD2Q6P5Q4 547 aa31.12■■■□□ 2.57
ITSN1-220ENST00000451686 TRPC5Q9UL62 973 aaPredicted RBP31.12■■■□□ 2.57
ITSN1-220ENST00000451686 ATAD2Q6PL18 1390 aa31.11■■■□□ 2.57
ITSN1-220ENST00000451686 CPSF1Q10570 1443 aaKnown RBP31.09■■■□□ 2.57
ITSN1-220ENST00000451686 CABP1Q9NZU7 370 aa31.09■■■□□ 2.57
ITSN1-220ENST00000451686 USP54Q70EL1 1684 aa31.08■■■□□ 2.57
ITSN1-220ENST00000451686 USP19O94966 1318 aa31.07■■■□□ 2.56
ITSN1-220ENST00000451686 PAK3O75914 559 aaPredicted RBP31.06■■■□□ 2.56
ITSN1-220ENST00000451686 UNC5CLQ8IV45 518 aa31.06■■■□□ 2.56
ITSN1-220ENST00000451686 TESK2Q96S53 571 aa31.06■■■□□ 2.56
ITSN1-220ENST00000451686 CD163L1Q9NR16 1453 aa31.06■■■□□ 2.56
ITSN1-220ENST00000451686 LMO7Q8WWI1 1683 aa31.06■■■□□ 2.56
ITSN1-220ENST00000451686 SLIT3O75094 1523 aa31.05■■■□□ 2.56
ITSN1-220ENST00000451686 BRWD3Q6RI45 1802 aa31.05■■■□□ 2.56
ITSN1-220ENST00000451686 FAM83GA6ND36 823 aa31.03■■■□□ 2.56
ITSN1-220ENST00000451686 HAP1P54257 671 aaPredicted RBP31.03■■■□□ 2.56
ITSN1-220ENST00000451686 PUS7Q96PZ0 661 aaKnown RBP31■■■□□ 2.55
ITSN1-220ENST00000451686 PLEKHG5O94827 1062 aa30.99■■■□□ 2.55
ITSN1-220ENST00000451686 GJD4Q96KN9 370 aaPredicted RBP30.99■■■□□ 2.55
ITSN1-220ENST00000451686 USP47Q96K76 1375 aa30.99■■■□□ 2.55
ITSN1-220ENST00000451686 ST20-MTHFSA0A0A6YYL1 179 aa30.98■■■□□ 2.55
ITSN1-220ENST00000451686 KIAA0232Q92628 1395 aa30.97■■■□□ 2.55
ITSN1-220ENST00000451686 COL18A1P39060 1754 aa30.97■■■□□ 2.55
ITSN1-220ENST00000451686 CPDO75976 1380 aa30.96■■■□□ 2.55
ITSN1-220ENST00000451686 VPS72Q15906 364 aa30.96■■■□□ 2.55
ITSN1-220ENST00000451686 ABTB2Q8N961 1025 aa30.96■■■□□ 2.55
ITSN1-220ENST00000451686 NUTM2GQ5VZR2 741 aa30.95■■■□□ 2.55
ITSN1-220ENST00000451686 EP400Q96L91 3159 aa30.95■■■□□ 2.54
ITSN1-220ENST00000451686 ZNF692Q9BU19 519 aaPredicted RBP30.94■■■□□ 2.54
ITSN1-220ENST00000451686 TTC21BQ7Z4L5 1316 aa30.92■■■□□ 2.54
ITSN1-220ENST00000451686 THSD7AQ9UPZ6 1657 aa30.91■■■□□ 2.54
ITSN1-220ENST00000451686 CAMTA1Q9Y6Y1 1673 aa30.91■■■□□ 2.54
ITSN1-220ENST00000451686 NLRP13Q86W25 1043 aa30.9■■■□□ 2.54
ITSN1-220ENST00000451686 BTG4Q9NY30 223 aa30.9■■■□□ 2.54
ITSN1-220ENST00000451686 MYOM1P52179 1685 aa30.9■■■□□ 2.54
ITSN1-220ENST00000451686 KTN1Q86UP2 1357 aaKnown RBP30.9■■■□□ 2.54
ITSN1-220ENST00000451686 CCER1Q8TC90 406 aaPredicted RBP30.89■■■□□ 2.54
ITSN1-220ENST00000451686 PRDM11Q9NQV5 511 aa30.89■■■□□ 2.54
ITSN1-220ENST00000451686 TTC21AQ8NDW8 1320 aa30.89■■■□□ 2.54
ITSN1-220ENST00000451686 NFAT5O94916 1531 aa30.88■■■□□ 2.53
ITSN1-220ENST00000451686 UPF1Q92900 1129 aaKnown RBP eCLIP30.88■■■□□ 2.53
ITSN1-220ENST00000451686 NINLQ9Y2I6 1382 aa30.88■■■□□ 2.53
ITSN1-220ENST00000451686 RGPD5Q99666 1765 aa30.87■■■□□ 2.53
ITSN1-220ENST00000451686 ONECUT3O60422 494 aaPredicted RBP30.87■■■□□ 2.53
ITSN1-220ENST00000451686 SLC24A1O60721 1099 aa30.86■■■□□ 2.53
ITSN1-220ENST00000451686 A0A1W2PP64 1363 aa30.86■■■□□ 2.53
ITSN1-220ENST00000451686 GCP02774 474 aa30.85■■■□□ 2.53
ITSN1-220ENST00000451686 ZC3H6P61129 1189 aaKnown RBP30.85■■■□□ 2.53
ITSN1-220ENST00000451686 EDC4Q6P2E9 1401 aaKnown RBP30.84■■■□□ 2.53
ITSN1-220ENST00000451686 SLC12A5Q9H2X9 1139 aa30.84■■■□□ 2.53
ITSN1-220ENST00000451686 USP31Q70CQ4 1352 aa30.83■■■□□ 2.53
ITSN1-220ENST00000451686 CHRNA2Q15822 529 aa30.83■■■□□ 2.53
ITSN1-220ENST00000451686 NLRP6P59044 892 aa30.82■■■□□ 2.52
ITSN1-220ENST00000451686 LTN1O94822 1766 aa30.82■■■□□ 2.52
ITSN1-220ENST00000451686 SPATA31A5Q5VU36 1347 aa30.81■■■□□ 2.52
ITSN1-220ENST00000451686 SPATA31A7Q8IWB4 1347 aa30.81■■■□□ 2.52
ITSN1-220ENST00000451686 ABCC6O95255 1503 aa30.8■■■□□ 2.52
ITSN1-220ENST00000451686 COL5A2P05997 1499 aaPredicted RBP30.8■■■□□ 2.52
ITSN1-220ENST00000451686 WNK3Q9BYP7 1800 aa30.8■■■□□ 2.52
ITSN1-220ENST00000451686 AATKQ6ZMQ8 1374 aa30.78■■■□□ 2.52
ITSN1-220ENST00000451686 OVOS2A0A0J9YW53 1432 aa30.77■■■□□ 2.52
ITSN1-220ENST00000451686 OVOS2Q6IE36 1432 aa30.77■■■□□ 2.52
ITSN1-220ENST00000451686 TMC1Q8TDI8 760 aa30.76■■■□□ 2.51
ITSN1-220ENST00000451686 TMF1P82094 1093 aa30.75■■■□□ 2.51
ITSN1-220ENST00000451686 SPATA31A1Q5TZJ5 1347 aa30.74■■■□□ 2.51
ITSN1-220ENST00000451686 HDGFL2Q7Z4V5 671 aaPredicted RBP30.74■■■□□ 2.51
ITSN1-220ENST00000451686 TERF2IPQ9NYB0 399 aa30.74■■■□□ 2.51
ITSN1-220ENST00000451686 ANKRD36BQ8N2N9 1353 aa30.74■■■□□ 2.51
ITSN1-220ENST00000451686 KIF20BQ96Q89 1820 aa30.73■■■□□ 2.51
ITSN1-220ENST00000451686 SEPT12Q8IYM1 358 aa30.73■■■□□ 2.51
ITSN1-220ENST00000451686 PARP4Q9UKK3 1724 aaKnown RBP30.73■■■□□ 2.51
ITSN1-220ENST00000451686 CCDC9Q9Y3X0 531 aaKnown RBP30.72■■■□□ 2.51
ITSN1-220ENST00000451686 ARHGEF25Q86VW2 580 aa30.71■■■□□ 2.51
ITSN1-220ENST00000451686 ZRANB1Q9UGI0 708 aa30.71■■■□□ 2.51
ITSN1-220ENST00000451686 NME9Q86XW9 330 aa30.7■■■□□ 2.51
ITSN1-220ENST00000451686 KCNH5Q8NCM2 988 aa30.69■■■□□ 2.5
ITSN1-220ENST00000451686 FAM98CQ17RN3 349 aaKnown RBP30.68■■■□□ 2.5
ITSN1-220ENST00000451686 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.68■■■□□ 2.5
ITSN1-220ENST00000451686 STRN4Q9NRL3 753 aa30.66■■■□□ 2.5
ITSN1-220ENST00000451686 LARP1Q6PKG0 1096 aaKnown RBP30.65■■■□□ 2.5
ITSN1-220ENST00000451686 CRB1P82279 1406 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms